RNA–Protein interactions for RNA: ENST00000512517.1

LINC01258-201, Transcript of long intergenic non-protein coding RNA 1258, humanhuman

TSL 2 BASIC

Gene LINC01258, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01258-201ENST00000512517 ZSCAN20P17040 1043 aaPredicted RBP11.24□□□□□ -0.61
LINC01258-201ENST00000512517 SAFB2Q14151 953 aaKnown RBP eCLIP11.24□□□□□ -0.61
LINC01258-201ENST00000512517 ARHGEF28Q8N1W1 1705 aaKnown RBP11.24□□□□□ -0.61
LINC01258-201ENST00000512517 ERBB4Q15303 1308 aa11.24□□□□□ -0.61
LINC01258-201ENST00000512517 CCDC94Q9BW85 323 aaPredicted RBP11.24□□□□□ -0.61
LINC01258-201ENST00000512517 DYNC1I1O14576 645 aa11.23□□□□□ -0.61
LINC01258-201ENST00000512517 MRS2Q9HD23 443 aa11.23□□□□□ -0.61
LINC01258-201ENST00000512517 ASXL1Q8IXJ9 1541 aa11.23□□□□□ -0.61
LINC01258-201ENST00000512517 IRX3P78415 501 aaPredicted RBP11.23□□□□□ -0.61
LINC01258-201ENST00000512517 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
LINC01258-201ENST00000512517 TXNDC2Q86VQ3 553 aa11.23□□□□□ -0.61
LINC01258-201ENST00000512517 FAM9BQ8IZU0 186 aa11.23□□□□□ -0.61
LINC01258-201ENST00000512517 FAM13BQ9NYF5 915 aa11.23□□□□□ -0.61
LINC01258-201ENST00000512517 EID1Q9Y6B2 187 aa11.23□□□□□ -0.61
LINC01258-201ENST00000512517 CDCA8Q53HL2 280 aa11.22□□□□□ -0.61
LINC01258-201ENST00000512517 PANK2Q9BZ23 570 aa11.22□□□□□ -0.61
LINC01258-201ENST00000512517 YTHDC2Q9H6S0 1430 aaKnown RBP11.22□□□□□ -0.61
LINC01258-201ENST00000512517 NRXN3Q9Y4C0 1643 aa11.21□□□□□ -0.61
LINC01258-201ENST00000512517 LTKP29376 864 aa11.21□□□□□ -0.61
LINC01258-201ENST00000512517 SLC20A2Q08357 652 aa11.21□□□□□ -0.61
LINC01258-201ENST00000512517 THEMISQ8N1K5 641 aaPredicted RBP11.21□□□□□ -0.61
LINC01258-201ENST00000512517 RNF216Q9NWF9 866 aaPredicted RBP11.21□□□□□ -0.61
LINC01258-201ENST00000512517 CEP170BQ9Y4F5 1589 aaPredicted RBP11.21□□□□□ -0.61
LINC01258-201ENST00000512517 SETD1AO15047 1707 aaKnown RBP11.21□□□□□ -0.62
LINC01258-201ENST00000512517 RRP1P56182 461 aaKnown RBP11.21□□□□□ -0.62
LINC01258-201ENST00000512517 FAM161AQ3B820 660 aa11.21□□□□□ -0.62
LINC01258-201ENST00000512517 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.62
LINC01258-201ENST00000512517 BECN1Q14457 450 aa11.2□□□□□ -0.62
LINC01258-201ENST00000512517 RGS22Q8NE09 1264 aa11.2□□□□□ -0.62
LINC01258-201ENST00000512517 PRKRIP1Q9H875 184 aaPredicted RBP11.2□□□□□ -0.62
LINC01258-201ENST00000512517 PTPRMP28827 1452 aa11.2□□□□□ -0.62
LINC01258-201ENST00000512517 PRAM1Q96QH2 718 aa11.19□□□□□ -0.62
LINC01258-201ENST00000512517 GRPEL1Q9HAV7 217 aa11.19□□□□□ -0.62
LINC01258-201ENST00000512517 DNTTIP2Q5QJE6 756 aaKnown RBP11.18□□□□□ -0.62
LINC01258-201ENST00000512517 ZSCAN30Q86W11 494 aa11.18□□□□□ -0.62
LINC01258-201ENST00000512517 PANK3Q9H999 370 aa11.18□□□□□ -0.62
LINC01258-201ENST00000512517 PRDM10Q9NQV6 1147 aa11.18□□□□□ -0.62
LINC01258-201ENST00000512517 METP08581 1390 aa11.18□□□□□ -0.62
LINC01258-201ENST00000512517 VGLL3A8MV65 326 aa11.18□□□□□ -0.62
LINC01258-201ENST00000512517 HSP90B1P14625 803 aaKnown RBP11.18□□□□□ -0.62
LINC01258-201ENST00000512517 SLC26A8Q96RN1 970 aa11.18□□□□□ -0.62
LINC01258-201ENST00000512517 MINK1Q8N4C8 1332 aaPredicted RBP11.18□□□□□ -0.62
LINC01258-201ENST00000512517 SLIT1O75093 1534 aa11.17□□□□□ -0.62
LINC01258-201ENST00000512517 EXOC6Q8TAG9 804 aa11.17□□□□□ -0.62
LINC01258-201ENST00000512517 KTN1Q86UP2 1357 aaKnown RBP11.17□□□□□ -0.62
LINC01258-201ENST00000512517 PLEKHG1Q9ULL1 1385 aa11.17□□□□□ -0.62
LINC01258-201ENST00000512517 SBNO2Q9Y2G9 1366 aa11.17□□□□□ -0.62
LINC01258-201ENST00000512517 CCDC184Q52MB2 194 aa11.16□□□□□ -0.62
LINC01258-201ENST00000512517 TMC1Q8TDI8 760 aa11.16□□□□□ -0.62
LINC01258-201ENST00000512517 MYOM1P52179 1685 aa11.16□□□□□ -0.62
LINC01258-201ENST00000512517 ZNF142P52746 1687 aaPredicted RBP11.16□□□□□ -0.62
LINC01258-201ENST00000512517 ARHGAP23Q9P227 1491 aa11.16□□□□□ -0.62
LINC01258-201ENST00000512517 CNKSR2Q8WXI2 1034 aa11.16□□□□□ -0.62
LINC01258-201ENST00000512517 EVC2Q86UK5 1308 aa11.16□□□□□ -0.62
LINC01258-201ENST00000512517 VIRMAQ69YN4 1812 aaKnown RBP11.16□□□□□ -0.62
LINC01258-201ENST00000512517 WAPLQ7Z5K2 1190 aa11.15□□□□□ -0.62
LINC01258-201ENST00000512517 LRPPRCP42704 1394 aaKnown RBP11.15□□□□□ -0.62
LINC01258-201ENST00000512517 MMP14P50281 582 aa11.15□□□□□ -0.63
LINC01258-201ENST00000512517 SRPK2P78362 688 aaKnown RBP11.15□□□□□ -0.63
LINC01258-201ENST00000512517 ADAMTS13Q76LX8 1427 aa11.14□□□□□ -0.63
LINC01258-201ENST00000512517 UQCRHLA0A096LP55 91 aa11.14□□□□□ -0.63
LINC01258-201ENST00000512517 CLGNO14967 610 aa11.14□□□□□ -0.63
LINC01258-201ENST00000512517 UQCRHP07919 91 aa11.14□□□□□ -0.63
LINC01258-201ENST00000512517 MSNP26038 577 aaKnown RBP11.14□□□□□ -0.63
LINC01258-201ENST00000512517 CCDC173Q0VFZ6 552 aa11.14□□□□□ -0.63
LINC01258-201ENST00000512517 CC2D1BQ5T0F9 858 aaKnown RBP11.14□□□□□ -0.63
LINC01258-201ENST00000512517 DNAJC2Q99543 621 aaKnown RBP11.14□□□□□ -0.63
LINC01258-201ENST00000512517 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
LINC01258-201ENST00000512517 TULP4Q9NRJ4 1543 aa11.14□□□□□ -0.63
LINC01258-201ENST00000512517 CSPP1Q1MSJ5 1256 aa11.13□□□□□ -0.63
LINC01258-201ENST00000512517 PLEKHH1Q9ULM0 1364 aa11.13□□□□□ -0.63
LINC01258-201ENST00000512517 HS1BP3Q53T59 392 aa11.13□□□□□ -0.63
LINC01258-201ENST00000512517 ANKLE2Q86XL3 938 aa11.13□□□□□ -0.63
LINC01258-201ENST00000512517 KNSTRNQ9Y448 316 aa11.13□□□□□ -0.63
LINC01258-201ENST00000512517 KNDC1Q76NI1 1749 aa11.12□□□□□ -0.63
LINC01258-201ENST00000512517 ABCC11Q96J66 1382 aa11.12□□□□□ -0.63
LINC01258-201ENST00000512517 C8orf34Q49A92 452 aa11.12□□□□□ -0.63
LINC01258-201ENST00000512517 AXDND1Q5T1B0 1012 aaPredicted RBP11.12□□□□□ -0.63
LINC01258-201ENST00000512517 DLC1Q96QB1 1528 aa11.12□□□□□ -0.63
LINC01258-201ENST00000512517 MCM4P33991 863 aa11.12□□□□□ -0.63
LINC01258-201ENST00000512517 PPP1R9BQ96SB3 815 aa11.12□□□□□ -0.63
LINC01258-201ENST00000512517 PER1O15534 1290 aaPredicted RBP11.11□□□□□ -0.63
LINC01258-201ENST00000512517 SLC12A5Q9H2X9 1139 aa11.11□□□□□ -0.63
LINC01258-201ENST00000512517 PTMSP20962 102 aa11.1□□□□□ -0.63
LINC01258-201ENST00000512517 ANTXR1Q9H6X2 564 aa11.1□□□□□ -0.63
LINC01258-201ENST00000512517 R3HCC1Q9Y3T6 440 aaKnown RBP11.1□□□□□ -0.63
LINC01258-201ENST00000512517 CDK19Q9BWU1 502 aa11.1□□□□□ -0.63
LINC01258-201ENST00000512517 AMOTL2Q9Y2J4 779 aa11.1□□□□□ -0.63
LINC01258-201ENST00000512517 ROBO2Q9HCK4 1378 aa11.09□□□□□ -0.63
LINC01258-201ENST00000512517 CPS1P31327 1500 aa11.09□□□□□ -0.63
LINC01258-201ENST00000512517 ZNF500O60304 480 aaPredicted RBP11.09□□□□□ -0.63
LINC01258-201ENST00000512517 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
LINC01258-201ENST00000512517 SASS6Q6UVJ0 657 aa11.09□□□□□ -0.63
LINC01258-201ENST00000512517 TBX22Q9Y458 520 aa11.09□□□□□ -0.63
LINC01258-201ENST00000512517 DIP2AQ14689 1571 aa11.09□□□□□ -0.63
LINC01258-201ENST00000512517 MED14O60244 1454 aa11.08□□□□□ -0.63
LINC01258-201ENST00000512517 DDX11L8A8MPP1 907 aa11.08□□□□□ -0.63
LINC01258-201ENST00000512517 TRAK2O60296 914 aa11.08□□□□□ -0.63
LINC01258-201ENST00000512517 RALBP1Q15311 655 aa11.08□□□□□ -0.63
LINC01258-201ENST00000512517 CENPQQ7L2Z9 268 aaPredicted RBP11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms