RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 SPHKAPQ2M3C7 1700 aa14.94□□□□□ -0.02
PRDM16-207ENST00000512462 PTPRTO14522 1441 aa14.94□□□□□ -0.02
PRDM16-207ENST00000512462 A0A0U1RQG5 324 aaPredicted RBP14.93□□□□□ -0.02
PRDM16-207ENST00000512462 RARSP54136 660 aaKnown RBP14.93□□□□□ -0.02
PRDM16-207ENST00000512462 NFKBIBQ15653 356 aa14.93□□□□□ -0.02
PRDM16-207ENST00000512462 KCNJ4P48050 445 aa14.93□□□□□ -0.02
PRDM16-207ENST00000512462 MCM10Q7L590 875 aa14.93□□□□□ -0.02
PRDM16-207ENST00000512462 RILPL2Q969X0 211 aa14.93□□□□□ -0.02
PRDM16-207ENST00000512462 PLCB2Q00722 1185 aa14.92□□□□□ -0.02
PRDM16-207ENST00000512462 FKBP5Q13451 457 aaPredicted RBP14.92□□□□□ -0.02
PRDM16-207ENST00000512462 TMEM57Q8N5G2 664 aa14.92□□□□□ -0.02
PRDM16-207ENST00000512462 TSPYL4Q9UJ04 414 aa14.92□□□□□ -0.02
PRDM16-207ENST00000512462 NUDT16Q96DE0 195 aaKnown RBP14.92□□□□□ -0.02
PRDM16-207ENST00000512462 CEP152O94986 1710 aa14.92□□□□□ -0.02
PRDM16-207ENST00000512462 RNF17Q9BXT8 1623 aaKnown RBP14.92□□□□□ -0.02
PRDM16-207ENST00000512462 TWISTNBQ3B726 338 aaPredicted RBP14.91□□□□□ -0.02
PRDM16-207ENST00000512462 MROH1Q8NDA8 1641 aa14.91□□□□□ -0.02
PRDM16-207ENST00000512462 NAP1L2Q9ULW6 460 aaPredicted RBP14.91□□□□□ -0.02
PRDM16-207ENST00000512462 CLTCL1P53675 1640 aa14.91□□□□□ -0.02
PRDM16-207ENST00000512462 KIDINS220Q9ULH0 1771 aa14.91□□□□□ -0.02
PRDM16-207ENST00000512462 VSIG10Q8N0Z9 540 aa14.91□□□□□ -0.02
PRDM16-207ENST00000512462 RLBP1P12271 317 aa14.9□□□□□ -0.02
PRDM16-207ENST00000512462 ABTB2Q8N961 1025 aa14.9□□□□□ -0.02
PRDM16-207ENST00000512462 MADDQ8WXG6 1647 aa14.89□□□□□ -0.03
PRDM16-207ENST00000512462 GOLGA6L22H0YM25 854 aa14.89□□□□□ -0.03
PRDM16-207ENST00000512462 LMOD3Q0VAK6 560 aa14.89□□□□□ -0.03
PRDM16-207ENST00000512462 FYB1O15117 783 aa14.89□□□□□ -0.03
PRDM16-207ENST00000512462 PSME1Q06323 249 aa14.89□□□□□ -0.03
PRDM16-207ENST00000512462 USHBP1Q8N6Y0 703 aa14.89□□□□□ -0.03
PRDM16-207ENST00000512462 CHMP4BQ9H444 224 aaKnown RBP14.89□□□□□ -0.03
PRDM16-207ENST00000512462 ZNF518AQ6AHZ1 1483 aa14.89□□□□□ -0.03
PRDM16-207ENST00000512462 COL17A1Q9UMD9 1497 aaPredicted RBP14.89□□□□□ -0.03
PRDM16-207ENST00000512462 ATF7IPQ6VMQ6 1270 aa14.89□□□□□ -0.03
PRDM16-207ENST00000512462 PDE3AQ14432 1141 aa14.88□□□□□ -0.03
PRDM16-207ENST00000512462 CHMP3Q9Y3E7 222 aa14.88□□□□□ -0.03
PRDM16-207ENST00000512462 UGGT1Q9NYU2 1555 aa14.88□□□□□ -0.03
PRDM16-207ENST00000512462 GNAI1P63096 354 aa14.88□□□□□ -0.03
PRDM16-207ENST00000512462 PCDHB15Q9Y5E8 787 aa14.88□□□□□ -0.03
PRDM16-207ENST00000512462 MVPQ14764 893 aaKnown RBP14.87□□□□□ -0.03
PRDM16-207ENST00000512462 TRIM44Q96DX7 344 aaPredicted RBP14.87□□□□□ -0.03
PRDM16-207ENST00000512462 CFAP74Q9C0B2 1584 aa14.87□□□□□ -0.03
PRDM16-207ENST00000512462 C22orf23Q9BZE7 217 aa14.87□□□□□ -0.03
PRDM16-207ENST00000512462 CCDC61Q9Y6R9 512 aa14.86□□□□□ -0.03
PRDM16-207ENST00000512462 AIMP1Q12904 312 aaKnown RBP14.86□□□□□ -0.03
PRDM16-207ENST00000512462 GLIPR1L2Q4G1C9 344 aa14.86□□□□□ -0.03
PRDM16-207ENST00000512462 ESCO1Q5FWF5 840 aa14.86□□□□□ -0.03
PRDM16-207ENST00000512462 TRIM27P14373 513 aa14.86□□□□□ -0.03
PRDM16-207ENST00000512462 TEFQ10587 303 aa14.86□□□□□ -0.03
PRDM16-207ENST00000512462 KRT24Q2M2I5 525 aa14.86□□□□□ -0.03
PRDM16-207ENST00000512462 KIF16BQ96L93 1317 aa14.85□□□□□ -0.03
PRDM16-207ENST00000512462 SLC4A2P04920 1241 aa14.85□□□□□ -0.03
PRDM16-207ENST00000512462 ZMYND15Q9H091 742 aa14.84□□□□□ -0.03
PRDM16-207ENST00000512462 AEBP1Q8IUX7 1158 aa14.84□□□□□ -0.03
PRDM16-207ENST00000512462 WDR63Q8IWG1 891 aa14.84□□□□□ -0.03
PRDM16-207ENST00000512462 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.84□□□□□ -0.03
PRDM16-207ENST00000512462 POGZQ7Z3K3 1410 aa14.84□□□□□ -0.03
PRDM16-207ENST00000512462 EFCAB6Q5THR3 1501 aa14.84□□□□□ -0.03
PRDM16-207ENST00000512462 NEURL4Q96JN8 1562 aa14.84□□□□□ -0.03
PRDM16-207ENST00000512462 RPGRIP1LQ68CZ1 1315 aa14.83□□□□□ -0.03
PRDM16-207ENST00000512462 IQGAP1P46940 1657 aa14.83□□□□□ -0.03
PRDM16-207ENST00000512462 F6X3S4 739 aa14.83□□□□□ -0.04
PRDM16-207ENST00000512462 GSE1Q14687 1217 aa14.83□□□□□ -0.04
PRDM16-207ENST00000512462 USP35Q9P2H5 1018 aa14.83□□□□□ -0.04
PRDM16-207ENST00000512462 NKTRP30414 1462 aaKnown RBP14.83□□□□□ -0.04
PRDM16-207ENST00000512462 FGD1P98174 961 aa14.82□□□□□ -0.04
PRDM16-207ENST00000512462 BRPF3Q9ULD4 1205 aa14.82□□□□□ -0.04
PRDM16-207ENST00000512462 PHACTR3Q96KR7 559 aa14.82□□□□□ -0.04
PRDM16-207ENST00000512462 PPRC1Q5VV67 1664 aaKnown RBP14.82□□□□□ -0.04
PRDM16-207ENST00000512462 LRPPRCP42704 1394 aaKnown RBP14.82□□□□□ -0.04
PRDM16-207ENST00000512462 LMTK2Q8IWU2 1503 aa14.82□□□□□ -0.04
PRDM16-207ENST00000512462 HSP90AB2PQ58FF8 381 aa14.81□□□□□ -0.04
PRDM16-207ENST00000512462 MLH3Q9UHC1 1453 aa14.81□□□□□ -0.04
PRDM16-207ENST00000512462 SMARCA5O60264 1052 aaPredicted RBP14.81□□□□□ -0.04
PRDM16-207ENST00000512462 SEC24BO95487 1268 aa14.81□□□□□ -0.04
PRDM16-207ENST00000512462 FRMPD1Q5SYB0 1578 aa14.8□□□□□ -0.04
PRDM16-207ENST00000512462 API5Q9BZZ5 524 aaKnown RBP14.8□□□□□ -0.04
PRDM16-207ENST00000512462 HMMRO75330 724 aa14.8□□□□□ -0.04
PRDM16-207ENST00000512462 TSPYL6Q8N831 410 aa14.8□□□□□ -0.04
PRDM16-207ENST00000512462 ATAD2Q6PL18 1390 aa14.8□□□□□ -0.04
PRDM16-207ENST00000512462 HECW2Q9P2P5 1572 aa14.8□□□□□ -0.04
PRDM16-207ENST00000512462 WASLO00401 505 aaPredicted RBP14.8□□□□□ -0.04
PRDM16-207ENST00000512462 ASXL1Q8IXJ9 1541 aa14.79□□□□□ -0.04
PRDM16-207ENST00000512462 NFE2L2Q16236 605 aa14.79□□□□□ -0.04
PRDM16-207ENST00000512462 MAP4K4O95819 1239 aaPredicted RBP14.78□□□□□ -0.04
PRDM16-207ENST00000512462 NLRP2Q9NX02 1062 aa14.78□□□□□ -0.04
PRDM16-207ENST00000512462 FCHSD2O94868 740 aa14.78□□□□□ -0.04
PRDM16-207ENST00000512462 NAP1L5Q96NT1 182 aaPredicted RBP14.78□□□□□ -0.04
PRDM16-207ENST00000512462 KIAA1210Q9ULL0 1709 aa14.78□□□□□ -0.04
PRDM16-207ENST00000512462 AMOTL2Q9Y2J4 779 aa14.78□□□□□ -0.04
PRDM16-207ENST00000512462 ZC3H6P61129 1189 aaKnown RBP14.78□□□□□ -0.04
PRDM16-207ENST00000512462 ANO2Q9NQ90 1003 aa14.78□□□□□ -0.04
PRDM16-207ENST00000512462 KIF1BO60333 1816 aa14.78□□□□□ -0.04
PRDM16-207ENST00000512462 TSHZ3Q63HK5 1081 aa14.77□□□□□ -0.04
PRDM16-207ENST00000512462 EXOC6BQ9Y2D4 811 aa14.77□□□□□ -0.05
PRDM16-207ENST00000512462 A0A1W2PP64 1363 aa14.77□□□□□ -0.05
PRDM16-207ENST00000512462 ABCA6Q8N139 1617 aa14.77□□□□□ -0.05
PRDM16-207ENST00000512462 PTMAP06454 111 aaKnown RBP14.77□□□□□ -0.05
PRDM16-207ENST00000512462 MYOM2P54296 1465 aa14.76□□□□□ -0.05
PRDM16-207ENST00000512462 NEO1Q92859 1461 aa14.76□□□□□ -0.05
PRDM16-207ENST00000512462 MAP3K4Q9Y6R4 1608 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 533.3 ms