RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	ZEB1	P37275	1124 aa	Predicted RBP	10.38	□□□□□ -0.75
NR1I3-231	ENST00000512340	CABP1	Q9NZU7	370 aa		10.38	□□□□□ -0.75
NR1I3-231	ENST00000512340	PNPLA6	Q8IY17	1366 aa		10.38	□□□□□ -0.75
NR1I3-231	ENST00000512340	TNS3	Q68CZ2	1445 aa		10.37	□□□□□ -0.75
NR1I3-231	ENST00000512340	POLR3A	O14802	1390 aa	Predicted RBP	10.37	□□□□□ -0.75
NR1I3-231	ENST00000512340	RGPD8	O14715	1765 aa	Predicted RBP	10.37	□□□□□ -0.75
NR1I3-231	ENST00000512340	PXDN	Q92626	1479 aa		10.36	□□□□□ -0.75
NR1I3-231	ENST00000512340	SRCAP	Q6ZRS2	3230 aa		10.36	□□□□□ -0.75
NR1I3-231	ENST00000512340	RBM6	P78332	1123 aa	Known RBP	10.36	□□□□□ -0.75
NR1I3-231	ENST00000512340	NLRP13	Q86W25	1043 aa		10.36	□□□□□ -0.75
NR1I3-231	ENST00000512340	NGLY1	Q96IV0	654 aa		10.36	□□□□□ -0.75
NR1I3-231	ENST00000512340	ABTB2	Q8N961	1025 aa		10.35	□□□□□ -0.75
NR1I3-231	ENST00000512340	TESK2	Q96S53	571 aa		10.35	□□□□□ -0.75
NR1I3-231	ENST00000512340	TTC21A	Q8NDW8	1320 aa		10.34	□□□□□ -0.75
NR1I3-231	ENST00000512340	USP32	Q8NFA0	1604 aa		10.34	□□□□□ -0.75
NR1I3-231	ENST00000512340	KTN1	Q86UP2	1357 aa	Known RBP	10.34	□□□□□ -0.75
NR1I3-231	ENST00000512340	AFF2	P51816	1311 aa		10.33	□□□□□ -0.76
NR1I3-231	ENST00000512340	ADAMTS2	O95450	1211 aa		10.33	□□□□□ -0.76
NR1I3-231	ENST00000512340	HSPA5	P11021	654 aa	Known RBP	10.33	□□□□□ -0.76
NR1I3-231	ENST00000512340	C8orf37	Q96NL8	207 aa		10.33	□□□□□ -0.76
NR1I3-231	ENST00000512340	TOPAZ1	Q8N9V7	1692 aa		10.32	□□□□□ -0.76
NR1I3-231	ENST00000512340	NLRP6	P59044	892 aa		10.32	□□□□□ -0.76
NR1I3-231	ENST00000512340	ERICH6	Q7L0X2	663 aa		10.32	□□□□□ -0.76
NR1I3-231	ENST00000512340	CCDC125	Q86Z20	511 aa		10.32	□□□□□ -0.76
NR1I3-231	ENST00000512340	POLR3GL	Q9BT43	218 aa		10.32	□□□□□ -0.76
NR1I3-231	ENST00000512340	USP6	P35125	1406 aa		10.32	□□□□□ -0.76
NR1I3-231	ENST00000512340	PLEKHG5	O94827	1062 aa		10.31	□□□□□ -0.76
NR1I3-231	ENST00000512340	KCNH5	Q8NCM2	988 aa		10.31	□□□□□ -0.76
NR1I3-231	ENST00000512340	SLC12A5	Q9H2X9	1139 aa		10.31	□□□□□ -0.76
NR1I3-231	ENST00000512340	QTRT2	Q9H974	415 aa	Known RBP	10.31	□□□□□ -0.76
NR1I3-231	ENST00000512340	RGS12	O14924	1447 aa		10.31	□□□□□ -0.76
NR1I3-231	ENST00000512340	COL22A1	Q8NFW1	1626 aa	Predicted RBP	10.3	□□□□□ -0.76
NR1I3-231	ENST00000512340	TTC21B	Q7Z4L5	1316 aa		10.3	□□□□□ -0.76
NR1I3-231	ENST00000512340	PRDM11	Q9NQV5	511 aa		10.29	□□□□□ -0.76
NR1I3-231	ENST00000512340	ZRANB1	Q9UGI0	708 aa		10.29	□□□□□ -0.76
NR1I3-231	ENST00000512340	EDC4	Q6P2E9	1401 aa	Known RBP	10.29	□□□□□ -0.76
NR1I3-231	ENST00000512340	ANKRD36B	Q8N2N9	1353 aa		10.28	□□□□□ -0.76
NR1I3-231	ENST00000512340	CPSF1	Q10570	1443 aa	Known RBP	10.28	□□□□□ -0.76
NR1I3-231	ENST00000512340	NUTM2G	Q5VZR2	741 aa		10.28	□□□□□ -0.76
NR1I3-231	ENST00000512340	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
NR1I3-231	ENST00000512340	CABLES1	Q8TDN4	633 aa		10.28	□□□□□ -0.76
NR1I3-231	ENST00000512340	USP21	Q9UK80	565 aa		10.28	□□□□□ -0.76
NR1I3-231	ENST00000512340	TRPC5	Q9UL62	973 aa	Predicted RBP	10.28	□□□□□ -0.76
NR1I3-231	ENST00000512340	GC	P02774	474 aa		10.27	□□□□□ -0.77
NR1I3-231	ENST00000512340	COG3	Q96JB2	828 aa		10.27	□□□□□ -0.77
NR1I3-231	ENST00000512340	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.27	□□□□□ -0.77
NR1I3-231	ENST00000512340	EVA1C	P58658	441 aa		10.26	□□□□□ -0.77
NR1I3-231	ENST00000512340	UNC5CL	Q8IV45	518 aa		10.26	□□□□□ -0.77
NR1I3-231	ENST00000512340	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.26	□□□□□ -0.77
NR1I3-231	ENST00000512340	CCDC9	Q9Y3X0	531 aa	Known RBP	10.26	□□□□□ -0.77
NR1I3-231	ENST00000512340		A0A1W2PP64	1363 aa		10.26	□□□□□ -0.77
NR1I3-231	ENST00000512340	ALS2	Q96Q42	1657 aa		10.25	□□□□□ -0.77
NR1I3-231	ENST00000512340	AKAP12	Q02952	1782 aa		10.25	□□□□□ -0.77
NR1I3-231	ENST00000512340	ZC3H6	P61129	1189 aa	Known RBP	10.25	□□□□□ -0.77
NR1I3-231	ENST00000512340	USP19	O94966	1318 aa		10.25	□□□□□ -0.77
NR1I3-231	ENST00000512340	CGNL1	Q0VF96	1302 aa		10.25	□□□□□ -0.77
NR1I3-231	ENST00000512340	ZBTB7C	A1YPR0	619 aa		10.24	□□□□□ -0.77
NR1I3-231	ENST00000512340	KNSTRN	Q9Y448	316 aa		10.24	□□□□□ -0.77
NR1I3-231	ENST00000512340	SSH2	Q76I76	1423 aa		10.24	□□□□□ -0.77
NR1I3-231	ENST00000512340	EP400	Q96L91	3159 aa		10.23	□□□□□ -0.77
NR1I3-231	ENST00000512340	FAM83G	A6ND36	823 aa		10.23	□□□□□ -0.77
NR1I3-231	ENST00000512340	BTG4	Q9NY30	223 aa		10.23	□□□□□ -0.77
NR1I3-231	ENST00000512340	CPD	O75976	1380 aa		10.23	□□□□□ -0.77
NR1I3-231	ENST00000512340	USP31	Q70CQ4	1352 aa		10.23	□□□□□ -0.77
NR1I3-231	ENST00000512340	MON2	Q7Z3U7	1717 aa		10.22	□□□□□ -0.77
NR1I3-231	ENST00000512340	MARF1	Q9Y4F3	1742 aa	Known RBP	10.22	□□□□□ -0.77
NR1I3-231	ENST00000512340	SOX12	O15370	315 aa		10.22	□□□□□ -0.77
NR1I3-231	ENST00000512340	NME9	Q86XW9	330 aa		10.22	□□□□□ -0.77
NR1I3-231	ENST00000512340	KIAA0232	Q92628	1395 aa		10.22	□□□□□ -0.77
NR1I3-231	ENST00000512340	ATRN	O75882	1429 aa		10.22	□□□□□ -0.77
NR1I3-231	ENST00000512340	VPS72	Q15906	364 aa		10.21	□□□□□ -0.77
NR1I3-231	ENST00000512340	CD163L1	Q9NR16	1453 aa		10.21	□□□□□ -0.78
NR1I3-231	ENST00000512340	COL14A1	Q05707	1796 aa	Known RBP	10.21	□□□□□ -0.78
NR1I3-231	ENST00000512340		A0A0G2JS52	829 aa		10.2	□□□□□ -0.78
NR1I3-231	ENST00000512340	NSD2	O96028	1365 aa		10.2	□□□□□ -0.78
NR1I3-231	ENST00000512340	CSB-PGBD3	P0DP91	1061 aa		10.2	□□□□□ -0.78
NR1I3-231	ENST00000512340	CHRNA2	Q15822	529 aa		10.2	□□□□□ -0.78
NR1I3-231	ENST00000512340	KIF7	Q2M1P5	1343 aa		10.2	□□□□□ -0.78
NR1I3-231	ENST00000512340	AATK	Q6ZMQ8	1374 aa		10.2	□□□□□ -0.78
NR1I3-231	ENST00000512340	GJD4	Q96KN9	370 aa	Predicted RBP	10.2	□□□□□ -0.78
NR1I3-231	ENST00000512340	NSD3	Q9BZ95	1437 aa		10.2	□□□□□ -0.78
NR1I3-231	ENST00000512340	PANK3	Q9H999	370 aa		10.2	□□□□□ -0.78
NR1I3-231	ENST00000512340	STRN4	Q9NRL3	753 aa		10.2	□□□□□ -0.78
NR1I3-231	ENST00000512340	NWD2	Q9ULI1	1742 aa		10.19	□□□□□ -0.78
NR1I3-231	ENST00000512340	SLIT2	O94813	1529 aa		10.19	□□□□□ -0.78
NR1I3-231	ENST00000512340	FYB1	O15117	783 aa		10.19	□□□□□ -0.78
NR1I3-231	ENST00000512340	PRKCSH	P14314	528 aa	Predicted RBP	10.19	□□□□□ -0.78
NR1I3-231	ENST00000512340	AMPH	P49418	695 aa		10.19	□□□□□ -0.78
NR1I3-231	ENST00000512340	ABCA3	Q99758	1704 aa		10.19	□□□□□ -0.78
NR1I3-231	ENST00000512340	SLIT3	O75094	1523 aa		10.18	□□□□□ -0.78
NR1I3-231	ENST00000512340	ARHGEF25	Q86VW2	580 aa		10.18	□□□□□ -0.78
NR1I3-231	ENST00000512340	GGNBP2	Q9H3C7	697 aa		10.18	□□□□□ -0.78
NR1I3-231	ENST00000512340	PIK3C2A	O00443	1686 aa		10.18	□□□□□ -0.78
NR1I3-231	ENST00000512340	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.18	□□□□□ -0.78
NR1I3-231	ENST00000512340	NRK	Q7Z2Y5	1582 aa		10.18	□□□□□ -0.78
NR1I3-231	ENST00000512340	BCL9L	Q86UU0	1499 aa		10.17	□□□□□ -0.78
NR1I3-231	ENST00000512340	BLM	P54132	1417 aa	Predicted RBP	10.17	□□□□□ -0.78
NR1I3-231	ENST00000512340	CCDC7	Q96M83	1385 aa		10.17	□□□□□ -0.78
NR1I3-231	ENST00000512340	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.17	□□□□□ -0.78
NR1I3-231	ENST00000512340	TOM1L2	Q6ZVM7	507 aa		10.17	□□□□□ -0.78

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