RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 GNAI2P04899 355 aa9.76□□□□□ -0.85
NEK1-208ENST00000512193 RNF20Q5VTR2 975 aa9.76□□□□□ -0.85
NEK1-208ENST00000512193 CLASRPQ8N2M8 674 aaKnown RBP9.76□□□□□ -0.85
NEK1-208ENST00000512193 ZNF608Q9ULD9 1512 aaPredicted RBP9.76□□□□□ -0.85
NEK1-208ENST00000512193 ABTB2Q8N961 1025 aa9.76□□□□□ -0.85
NEK1-208ENST00000512193 NKTRP30414 1462 aaKnown RBP9.76□□□□□ -0.85
NEK1-208ENST00000512193 LRPPRCP42704 1394 aaKnown RBP9.76□□□□□ -0.85
NEK1-208ENST00000512193 WAPLQ7Z5K2 1190 aa9.76□□□□□ -0.85
NEK1-208ENST00000512193 GAS2L2Q8NHY3 880 aa9.76□□□□□ -0.85
NEK1-208ENST00000512193 R3HCC1Q9Y3T6 440 aaKnown RBP9.76□□□□□ -0.85
NEK1-208ENST00000512193 GPATCH8Q9UKJ3 1502 aaKnown RBP9.75□□□□□ -0.85
NEK1-208ENST00000512193 NFE2L2Q16236 605 aa9.75□□□□□ -0.85
NEK1-208ENST00000512193 RIC3Q7Z5B4 369 aa9.75□□□□□ -0.85
NEK1-208ENST00000512193 ZNF592Q92610 1267 aa9.75□□□□□ -0.85
NEK1-208ENST00000512193 GRIN2AQ12879 1464 aa9.75□□□□□ -0.85
NEK1-208ENST00000512193 MPNDQ8N594 471 aa9.75□□□□□ -0.85
NEK1-208ENST00000512193 HDGFL1Q5TGJ6 251 aa9.75□□□□□ -0.85
NEK1-208ENST00000512193 SLC26A8Q96RN1 970 aa9.75□□□□□ -0.85
NEK1-208ENST00000512193 TBC1D2Q9BYX2 928 aa9.75□□□□□ -0.85
NEK1-208ENST00000512193 RPGRIP1LQ68CZ1 1315 aa9.75□□□□□ -0.85
NEK1-208ENST00000512193 FBXW7Q969H0 707 aa9.74□□□□□ -0.85
NEK1-208ENST00000512193 NEUROD6Q96NK8 337 aa9.74□□□□□ -0.85
NEK1-208ENST00000512193 MIS18AQ9NYP9 233 aa9.74□□□□□ -0.85
NEK1-208ENST00000512193 TRIM27P14373 513 aa9.74□□□□□ -0.85
NEK1-208ENST00000512193 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.74□□□□□ -0.85
NEK1-208ENST00000512193 CCDC34Q96HJ3 373 aa9.74□□□□□ -0.85
NEK1-208ENST00000512193 GRPEL1Q9HAV7 217 aa9.74□□□□□ -0.85
NEK1-208ENST00000512193 NLRP2Q9NX02 1062 aa9.74□□□□□ -0.85
NEK1-208ENST00000512193 RAPGEF4Q8WZA2 1011 aa9.74□□□□□ -0.85
NEK1-208ENST00000512193 ATAD2Q6PL18 1390 aa9.74□□□□□ -0.85
NEK1-208ENST00000512193 FIBPO43427 364 aa9.74□□□□□ -0.85
NEK1-208ENST00000512193 RASSF8Q8NHQ8 419 aa9.74□□□□□ -0.85
NEK1-208ENST00000512193 RTEL1-TNFRSF6BF6WH68 1400 aa9.73□□□□□ -0.85
NEK1-208ENST00000512193 CPLX1O14810 134 aa9.73□□□□□ -0.85
NEK1-208ENST00000512193 CNTROBQ8N137 903 aa9.73□□□□□ -0.85
NEK1-208ENST00000512193 MBD3O95983 291 aa9.73□□□□□ -0.85
NEK1-208ENST00000512193 APPP05067 770 aa9.73□□□□□ -0.85
NEK1-208ENST00000512193 GTF2E1P29083 439 aaPredicted RBP9.73□□□□□ -0.85
NEK1-208ENST00000512193 ZNF692Q9BU19 519 aaPredicted RBP9.73□□□□□ -0.85
NEK1-208ENST00000512193 IL1RAPL2Q9NP60 686 aa9.73□□□□□ -0.85
NEK1-208ENST00000512193 EXOC6BQ9Y2D4 811 aa9.73□□□□□ -0.85
NEK1-208ENST00000512193 LAMC3Q9Y6N6 1575 aa9.73□□□□□ -0.85
NEK1-208ENST00000512193 MAP4K4O95819 1239 aaPredicted RBP9.73□□□□□ -0.85
NEK1-208ENST00000512193 UGGT2Q9NYU1 1516 aa9.73□□□□□ -0.85
NEK1-208ENST00000512193 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
NEK1-208ENST00000512193 LRRCC1Q9C099 1032 aa9.72□□□□□ -0.85
NEK1-208ENST00000512193 CCDC61Q9Y6R9 512 aa9.72□□□□□ -0.85
NEK1-208ENST00000512193 CPLX2Q6PUV4 134 aaKnown RBP9.72□□□□□ -0.85
NEK1-208ENST00000512193 MCM10Q7L590 875 aa9.72□□□□□ -0.85
NEK1-208ENST00000512193 BCL11BQ9C0K0 894 aaPredicted RBP9.72□□□□□ -0.85
NEK1-208ENST00000512193 EMILIN1Q9Y6C2 1016 aa9.72□□□□□ -0.85
NEK1-208ENST00000512193 FBLN1P23142 703 aa9.72□□□□□ -0.85
NEK1-208ENST00000512193 MCM2P49736 904 aa9.72□□□□□ -0.85
NEK1-208ENST00000512193 CCT4P50991 539 aaKnown RBP9.72□□□□□ -0.85
NEK1-208ENST00000512193 IDI1Q13907 227 aa9.72□□□□□ -0.85
NEK1-208ENST00000512193 PCDHB15Q9Y5E8 787 aa9.72□□□□□ -0.85
NEK1-208ENST00000512193 TESK2Q96S53 571 aa9.72□□□□□ -0.85
NEK1-208ENST00000512193 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.72□□□□□ -0.85
NEK1-208ENST00000512193 GPRASP1Q5JY77 1395 aa9.71□□□□□ -0.85
NEK1-208ENST00000512193 SMARCA5O60264 1052 aaPredicted RBP9.71□□□□□ -0.85
NEK1-208ENST00000512193 SASS6Q6UVJ0 657 aa9.71□□□□□ -0.85
NEK1-208ENST00000512193 NUDT16Q96DE0 195 aaKnown RBP9.71□□□□□ -0.85
NEK1-208ENST00000512193 NME9Q86XW9 330 aa9.71□□□□□ -0.86
NEK1-208ENST00000512193 RPAP2Q8IXW5 612 aaPredicted RBP9.71□□□□□ -0.86
NEK1-208ENST00000512193 CIZ1Q9ULV3 898 aaPredicted RBP9.71□□□□□ -0.86
NEK1-208ENST00000512193 UNC13AQ9UPW8 1703 aa9.71□□□□□ -0.86
NEK1-208ENST00000512193 EVA1CP58658 441 aa9.7□□□□□ -0.86
NEK1-208ENST00000512193 CCAR2Q8N163 923 aaKnown RBP9.7□□□□□ -0.86
NEK1-208ENST00000512193 SRCIN1Q9C0H9 1055 aa9.7□□□□□ -0.86
NEK1-208ENST00000512193 SCAF11Q99590 1463 aaKnown RBP9.7□□□□□ -0.86
NEK1-208ENST00000512193 ESPNB1AK53 854 aa9.7□□□□□ -0.86
NEK1-208ENST00000512193 PES1O00541 588 aaKnown RBP9.7□□□□□ -0.86
NEK1-208ENST00000512193 CHMP4CQ96CF2 233 aa9.7□□□□□ -0.86
NEK1-208ENST00000512193 CWC22Q9HCG8 908 aaKnown RBP9.7□□□□□ -0.86
NEK1-208ENST00000512193 PARD3Q8TEW0 1356 aa9.7□□□□□ -0.86
NEK1-208ENST00000512193 LRRFIP1Q32MZ4 808 aaKnown RBP9.7□□□□□ -0.86
NEK1-208ENST00000512193 CCDC73Q6ZRK6 1079 aa9.7□□□□□ -0.86
NEK1-208ENST00000512193 UPF3BQ9BZI7 483 aaKnown RBP9.7□□□□□ -0.86
NEK1-208ENST00000512193 IFT57Q9NWB7 429 aa9.7□□□□□ -0.86
NEK1-208ENST00000512193 TNNQ9UQP3 1299 aa9.7□□□□□ -0.86
NEK1-208ENST00000512193 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
NEK1-208ENST00000512193 SRGAP3O43295 1099 aa9.69□□□□□ -0.86
NEK1-208ENST00000512193 DHX29Q7Z478 1369 aaKnown RBP9.69□□□□□ -0.86
NEK1-208ENST00000512193 CCDC173Q0VFZ6 552 aa9.69□□□□□ -0.86
NEK1-208ENST00000512193 ESCO1Q5FWF5 840 aa9.69□□□□□ -0.86
NEK1-208ENST00000512193 SIL1Q9H173 461 aa9.69□□□□□ -0.86
NEK1-208ENST00000512193 CCDC39Q9UFE4 941 aa9.69□□□□□ -0.86
NEK1-208ENST00000512193 KIF14Q15058 1648 aa9.69□□□□□ -0.86
NEK1-208ENST00000512193 F6X3S4 739 aa9.69□□□□□ -0.86
NEK1-208ENST00000512193 TRDNQ13061 729 aa9.69□□□□□ -0.86
NEK1-208ENST00000512193 WASHC4Q2M389 1173 aa9.69□□□□□ -0.86
NEK1-208ENST00000512193 FBXO31Q5XUX0 539 aaPredicted RBP9.69□□□□□ -0.86
NEK1-208ENST00000512193 SYNE3Q6ZMZ3 975 aa9.69□□□□□ -0.86
NEK1-208ENST00000512193 SYTL4Q96C24 671 aaPredicted RBP9.69□□□□□ -0.86
NEK1-208ENST00000512193 TSPY26PQ9H489 355 aa9.69□□□□□ -0.86
NEK1-208ENST00000512193 RALGAPBQ86X10 1494 aa9.69□□□□□ -0.86
NEK1-208ENST00000512193 AKAP17AQ02040 695 aaKnown RBP9.68□□□□□ -0.86
NEK1-208ENST00000512193 DNAJC2Q99543 621 aaKnown RBP9.68□□□□□ -0.86
NEK1-208ENST00000512193 ALDH1L2Q3SY69 923 aa9.68□□□□□ -0.86
NEK1-208ENST00000512193 SDF4Q9BRK5 362 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms