RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 CALD1Q05682 793 aaKnown RBP16.18■□□□□ 0.18
LIN54-210ENST00000510877 CEP170BQ9Y4F5 1589 aaPredicted RBP16.18■□□□□ 0.18
LIN54-210ENST00000510877 KIF13AQ9H1H9 1805 aa16.18■□□□□ 0.18
LIN54-210ENST00000510877 FER1L4A9Z1Z3 1794 aa16.18■□□□□ 0.18
LIN54-210ENST00000510877 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
LIN54-210ENST00000510877 GPR162Q16538 588 aa16.17■□□□□ 0.18
LIN54-210ENST00000510877 TRIM37O94972 964 aa16.17■□□□□ 0.18
LIN54-210ENST00000510877 ABCC11Q96J66 1382 aa16.17■□□□□ 0.18
LIN54-210ENST00000510877 PLA2R1Q13018 1463 aa16.17■□□□□ 0.18
LIN54-210ENST00000510877 GJD4Q96KN9 370 aaPredicted RBP16.17■□□□□ 0.18
LIN54-210ENST00000510877 DNMT1P26358 1616 aaKnown RBP16.17■□□□□ 0.18
LIN54-210ENST00000510877 TTC21BQ7Z4L5 1316 aa16.16■□□□□ 0.18
LIN54-210ENST00000510877 SIRT1Q96EB6 747 aa16.15■□□□□ 0.18
LIN54-210ENST00000510877 MAST1Q9Y2H9 1570 aa16.15■□□□□ 0.18
LIN54-210ENST00000510877 CLTCQ00610 1675 aaKnown RBP16.15■□□□□ 0.18
LIN54-210ENST00000510877 HMOX1P09601 288 aa16.15■□□□□ 0.18
LIN54-210ENST00000510877 ZCRB1Q8TBF4 217 aaKnown RBP16.15■□□□□ 0.18
LIN54-210ENST00000510877 ANP32EQ9BTT0 268 aa16.15■□□□□ 0.18
LIN54-210ENST00000510877 SMARCC1Q92922 1105 aaPredicted RBP16.14■□□□□ 0.17
LIN54-210ENST00000510877 ZPR1O75312 459 aa16.14■□□□□ 0.17
LIN54-210ENST00000510877 ADGBQ8N7X0 1667 aa16.14■□□□□ 0.17
LIN54-210ENST00000510877 CPS1P31327 1500 aa16.13■□□□□ 0.17
LIN54-210ENST00000510877 PTCD1O75127 700 aaKnown RBP16.13■□□□□ 0.17
LIN54-210ENST00000510877 PHF14O94880 888 aa16.13■□□□□ 0.17
LIN54-210ENST00000510877 STK31Q9BXU1 1019 aa16.13■□□□□ 0.17
LIN54-210ENST00000510877 USHBP1Q8N6Y0 703 aa16.13■□□□□ 0.17
LIN54-210ENST00000510877 KDM5CP41229 1560 aa16.12■□□□□ 0.17
LIN54-210ENST00000510877 FAM182BQ5T319 152 aa16.12■□□□□ 0.17
LIN54-210ENST00000510877 PPIP5K1Q6PFW1 1433 aa16.12■□□□□ 0.17
LIN54-210ENST00000510877 ABCA6Q8N139 1617 aa16.11■□□□□ 0.17
LIN54-210ENST00000510877 SULT6B1Q6IMI4 303 aa16.11■□□□□ 0.17
LIN54-210ENST00000510877 GAS2L2Q8NHY3 880 aa16.11■□□□□ 0.17
LIN54-210ENST00000510877 C16orf71Q8IYS4 520 aaPredicted RBP16.11■□□□□ 0.17
LIN54-210ENST00000510877 FAM177BA6PVY3 158 aa16.1■□□□□ 0.17
LIN54-210ENST00000510877 TAF7LQ5H9L4 462 aa16.1■□□□□ 0.17
LIN54-210ENST00000510877 CDC42BPAQ5VT25 1732 aa16.1■□□□□ 0.17
LIN54-210ENST00000510877 ROBO2Q9HCK4 1378 aa16.09■□□□□ 0.17
LIN54-210ENST00000510877 EIF2S2P20042 333 aaKnown RBP16.08■□□□□ 0.17
LIN54-210ENST00000510877 RFC4P35249 363 aa16.08■□□□□ 0.17
LIN54-210ENST00000510877 ADGRL3Q9HAR2 1447 aa16.08■□□□□ 0.17
LIN54-210ENST00000510877 SPATA31A3Q5VYP0 1347 aa16.08■□□□□ 0.16
LIN54-210ENST00000510877 PSDA5PKW4 1024 aaPredicted RBP16.07■□□□□ 0.16
LIN54-210ENST00000510877 SOCS7O14512 581 aa16.07■□□□□ 0.16
LIN54-210ENST00000510877 BICDL1Q6ZP65 573 aa16.07■□□□□ 0.16
LIN54-210ENST00000510877 STARD3NLO95772 234 aa16.07■□□□□ 0.16
LIN54-210ENST00000510877 CHMP3Q9Y3E7 222 aa16.07■□□□□ 0.16
LIN54-210ENST00000510877 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
LIN54-210ENST00000510877 CCDC125Q86Z20 511 aa16.07■□□□□ 0.16
LIN54-210ENST00000510877 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
LIN54-210ENST00000510877 BCORL1Q5H9F3 1711 aa16.07■□□□□ 0.16
LIN54-210ENST00000510877 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
LIN54-210ENST00000510877 WWC3Q9ULE0 1092 aa16.06■□□□□ 0.16
LIN54-210ENST00000510877 CCNL1Q9UK58 526 aaPredicted RBP16.05■□□□□ 0.16
LIN54-210ENST00000510877 CDC42BPBQ9Y5S2 1711 aa16.05■□□□□ 0.16
LIN54-210ENST00000510877 LARP1Q6PKG0 1096 aaKnown RBP16.05■□□□□ 0.16
LIN54-210ENST00000510877 RRP7AQ9Y3A4 280 aaKnown RBP16.05■□□□□ 0.16
LIN54-210ENST00000510877 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
LIN54-210ENST00000510877 FRAT2O75474 233 aaPredicted RBP16.03■□□□□ 0.16
LIN54-210ENST00000510877 KIAA0232Q92628 1395 aa16.03■□□□□ 0.16
LIN54-210ENST00000510877 PLEKHH1Q9ULM0 1364 aa16.03■□□□□ 0.16
LIN54-210ENST00000510877 RALBP1Q15311 655 aa16.02■□□□□ 0.16
LIN54-210ENST00000510877 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.02■□□□□ 0.16
LIN54-210ENST00000510877 KIF6Q6ZMV9 814 aa16.02■□□□□ 0.15
LIN54-210ENST00000510877 FAM135BQ49AJ0 1406 aa16.02■□□□□ 0.15
LIN54-210ENST00000510877 EN1Q05925 392 aaPredicted RBP16.02■□□□□ 0.15
LIN54-210ENST00000510877 PLEKHG3A1L390 1219 aa16.01■□□□□ 0.15
LIN54-210ENST00000510877 SPON1Q9HCB6 807 aa16.01■□□□□ 0.15
LIN54-210ENST00000510877 ATP6V1AP38606 617 aa16■□□□□ 0.15
LIN54-210ENST00000510877 MYH16Q9H6N6 1097 aa16■□□□□ 0.15
LIN54-210ENST00000510877 KIDINS220Q9ULH0 1771 aa16■□□□□ 0.15
LIN54-210ENST00000510877 ANP32AP39687 249 aaKnown RBP16■□□□□ 0.15
LIN54-210ENST00000510877 NEXNQ0ZGT2 675 aa16■□□□□ 0.15
LIN54-210ENST00000510877 R3HDM1Q15032 1099 aaKnown RBP16■□□□□ 0.15
LIN54-210ENST00000510877 ZNF652Q9Y2D9 606 aa15.99■□□□□ 0.15
LIN54-210ENST00000510877 PAXIP1Q6ZW49 1069 aaPredicted RBP15.99■□□□□ 0.15
LIN54-210ENST00000510877 RTCBQ9Y3I0 505 aaKnown RBP15.99■□□□□ 0.15
LIN54-210ENST00000510877 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
LIN54-210ENST00000510877 FAM83GA6ND36 823 aa15.98■□□□□ 0.15
LIN54-210ENST00000510877 HSP90B1P14625 803 aaKnown RBP15.98■□□□□ 0.15
LIN54-210ENST00000510877 OS9Q13438 667 aaPredicted RBP15.98■□□□□ 0.15
LIN54-210ENST00000510877 PARP3Q9Y6F1 533 aa15.98■□□□□ 0.15
LIN54-210ENST00000510877 VPS72Q15906 364 aa15.98■□□□□ 0.15
LIN54-210ENST00000510877 FBXW7Q969H0 707 aa15.98■□□□□ 0.15
LIN54-210ENST00000510877 EMILIN1Q9Y6C2 1016 aa15.98■□□□□ 0.15
LIN54-210ENST00000510877 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
LIN54-210ENST00000510877 PRIM1P49642 420 aaKnown RBP15.97■□□□□ 0.15
LIN54-210ENST00000510877 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
LIN54-210ENST00000510877 ADGRB3O60242 1522 aa15.97■□□□□ 0.15
LIN54-210ENST00000510877 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
LIN54-210ENST00000510877 FLAD1Q8NFF5 587 aa15.97■□□□□ 0.15
LIN54-210ENST00000510877 NINLQ9Y2I6 1382 aa15.96■□□□□ 0.15
LIN54-210ENST00000510877 DDX58O95786 925 aaKnown RBP15.96■□□□□ 0.15
LIN54-210ENST00000510877 NECTIN2Q92692 538 aa15.96■□□□□ 0.15
LIN54-210ENST00000510877 NKTRP30414 1462 aaKnown RBP15.96■□□□□ 0.15
LIN54-210ENST00000510877 KCNJ4P48050 445 aa15.96■□□□□ 0.14
LIN54-210ENST00000510877 DEFB132Q7Z7B7 95 aa15.96■□□□□ 0.14
LIN54-210ENST00000510877 IP6K1Q92551 441 aa15.96■□□□□ 0.14
LIN54-210ENST00000510877 NCOA3Q9Y6Q9 1424 aa15.96■□□□□ 0.14
LIN54-210ENST00000510877 C1orf167Q5SNV9 1468 aa15.96■□□□□ 0.14
LIN54-210ENST00000510877 THRAP3Q9Y2W1 955 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms