RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 WASLO00401 505 aaPredicted RBP21.46■■□□□ 1.03
CLMAT3-201ENST00000510576 MAPK8IP3Q9UPT6 1336 aa21.46■■□□□ 1.03
CLMAT3-201ENST00000510576 PNPLA6Q8IY17 1366 aa21.45■■□□□ 1.03
CLMAT3-201ENST00000510576 PLEKHF1Q96S99 279 aa21.45■■□□□ 1.02
CLMAT3-201ENST00000510576 CDC42BPGQ6DT37 1551 aa21.45■■□□□ 1.02
CLMAT3-201ENST00000510576 PPIP5K1Q6PFW1 1433 aa21.45■■□□□ 1.02
CLMAT3-201ENST00000510576 DIAPH1O60610 1272 aaKnown RBP21.45■■□□□ 1.02
CLMAT3-201ENST00000510576 RARSP54136 660 aaKnown RBP21.45■■□□□ 1.02
CLMAT3-201ENST00000510576 NOP58Q9Y2X3 529 aaKnown RBP21.45■■□□□ 1.02
CLMAT3-201ENST00000510576 MAP2P11137 1827 aaKnown RBP21.45■■□□□ 1.02
CLMAT3-201ENST00000510576 TMEM2Q9UHN6 1383 aa21.44■■□□□ 1.02
CLMAT3-201ENST00000510576 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.44■■□□□ 1.02
CLMAT3-201ENST00000510576 SIRT1Q96EB6 747 aa21.44■■□□□ 1.02
CLMAT3-201ENST00000510576 ITSN1Q15811 1721 aa21.44■■□□□ 1.02
CLMAT3-201ENST00000510576 EDC4Q6P2E9 1401 aaKnown RBP21.44■■□□□ 1.02
CLMAT3-201ENST00000510576 MON2Q7Z3U7 1717 aa21.43■■□□□ 1.02
CLMAT3-201ENST00000510576 TXNDC2Q86VQ3 553 aa21.43■■□□□ 1.02
CLMAT3-201ENST00000510576 IPO9Q96P70 1041 aaKnown RBP21.43■■□□□ 1.02
CLMAT3-201ENST00000510576 PNNQ9H307 717 aaKnown RBP21.43■■□□□ 1.02
CLMAT3-201ENST00000510576 CPSF1Q10570 1443 aaKnown RBP21.43■■□□□ 1.02
CLMAT3-201ENST00000510576 TMPOP42166 694 aaKnown RBP21.42■■□□□ 1.02
CLMAT3-201ENST00000510576 SKAP1Q86WV1 359 aa21.42■■□□□ 1.02
CLMAT3-201ENST00000510576 AKAP12Q02952 1782 aa21.42■■□□□ 1.02
CLMAT3-201ENST00000510576 FRAT1Q92837 279 aaPredicted RBP21.41■■□□□ 1.02
CLMAT3-201ENST00000510576 PANK1Q8TE04 598 aa21.39■■□□□ 1.01
CLMAT3-201ENST00000510576 LRRC7Q96NW7 1537 aa21.38■■□□□ 1.01
CLMAT3-201ENST00000510576 NUDT16Q96DE0 195 aaKnown RBP21.38■■□□□ 1.01
CLMAT3-201ENST00000510576 COG6Q9Y2V7 657 aa21.38■■□□□ 1.01
CLMAT3-201ENST00000510576 CT47B1P0C2W7 299 aaPredicted RBP21.37■■□□□ 1.01
CLMAT3-201ENST00000510576 CLUAP1Q96AJ1 413 aa21.37■■□□□ 1.01
CLMAT3-201ENST00000510576 POLKQ9UBT6 870 aa21.37■■□□□ 1.01
CLMAT3-201ENST00000510576 TRIM35Q9UPQ4 493 aa21.37■■□□□ 1.01
CLMAT3-201ENST00000510576 IL16Q14005 1332 aa21.36■■□□□ 1.01
CLMAT3-201ENST00000510576 NPM2Q86SE8 214 aaKnown RBP21.36■■□□□ 1.01
CLMAT3-201ENST00000510576 ADAMTS13Q76LX8 1427 aa21.36■■□□□ 1.01
CLMAT3-201ENST00000510576 C3P01024 1663 aa21.36■■□□□ 1.01
CLMAT3-201ENST00000510576 PLEKHG1Q9ULL1 1385 aa21.35■■□□□ 1.01
CLMAT3-201ENST00000510576 FCHSD2O94868 740 aa21.35■■□□□ 1.01
CLMAT3-201ENST00000510576 AAMPQ13685 434 aa21.35■■□□□ 1.01
CLMAT3-201ENST00000510576 CCDC61Q9Y6R9 512 aa21.35■■□□□ 1.01
CLMAT3-201ENST00000510576 PPM1GO15355 546 aaPredicted RBP21.34■■□□□ 1.01
CLMAT3-201ENST00000510576 ZBTB47Q9UFB7 747 aaPredicted RBP21.34■■□□□ 1.01
CLMAT3-201ENST00000510576 RIPK4P57078 832 aa21.34■■□□□ 1.01
CLMAT3-201ENST00000510576 BCL2L13Q9BXK5 485 aa21.34■■□□□ 1.01
CLMAT3-201ENST00000510576 CDK12Q9NYV4 1490 aaPredicted RBP21.33■■□□□ 1.01
CLMAT3-201ENST00000510576 NME9Q86XW9 330 aa21.33■■□□□ 1.01
CLMAT3-201ENST00000510576 TSR2Q969E8 191 aaKnown RBP21.33■■□□□ 1.01
CLMAT3-201ENST00000510576 ROBO2Q9HCK4 1378 aa21.33■■□□□ 1
CLMAT3-201ENST00000510576 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.32■■□□□ 1
CLMAT3-201ENST00000510576 PAK3O75914 559 aaPredicted RBP21.32■■□□□ 1
CLMAT3-201ENST00000510576 TOPAZ1Q8N9V7 1692 aa21.32■■□□□ 1
CLMAT3-201ENST00000510576 AATKQ6ZMQ8 1374 aa21.32■■□□□ 1
CLMAT3-201ENST00000510576 NEFMP07197 916 aa21.32■■□□□ 1
CLMAT3-201ENST00000510576 FER1L4A9Z1Z3 1794 aa21.31■■□□□ 1
CLMAT3-201ENST00000510576 ADAMTSL3P82987 1691 aa21.31■■□□□ 1
CLMAT3-201ENST00000510576 IGHDP01880 384 aa21.3■■□□□ 1
CLMAT3-201ENST00000510576 FBLN1P23142 703 aa21.3■■□□□ 1
CLMAT3-201ENST00000510576 EXOSC9Q06265 439 aaKnown RBP21.3■■□□□ 1
CLMAT3-201ENST00000510576 COG3Q96JB2 828 aa21.3■■□□□ 1
CLMAT3-201ENST00000510576 RSPH6AQ9H0K4 717 aa21.3■■□□□ 1
CLMAT3-201ENST00000510576 NCKAP5LQ9HCH0 1330 aa21.3■■□□□ 1
CLMAT3-201ENST00000510576 RLBP1P12271 317 aa21.29■■□□□ 1
CLMAT3-201ENST00000510576 PRKAR2BP31323 418 aa21.29■■□□□ 1
CLMAT3-201ENST00000510576 ZNF692Q9BU19 519 aaPredicted RBP21.29■■□□□ 1
CLMAT3-201ENST00000510576 LTKP29376 864 aa21.28■■□□□ 1
CLMAT3-201ENST00000510576 RGS3P49796 1198 aa21.28■■□□□ 1
CLMAT3-201ENST00000510576 FAM161AQ3B820 660 aa21.28■■□□□ 1
CLMAT3-201ENST00000510576 ZKSCAN2Q63HK3 967 aa21.28■■□□□ 1
CLMAT3-201ENST00000510576 TNNQ9UQP3 1299 aa21.28■■□□□ 1
CLMAT3-201ENST00000510576 EMILIN1Q9Y6C2 1016 aa21.28■■□□□ 1
CLMAT3-201ENST00000510576 VIRMAQ69YN4 1812 aaKnown RBP21.28■■□□□ 1
CLMAT3-201ENST00000510576 PRR36Q9H6K5 1346 aa21.28■■□□□ 1
CLMAT3-201ENST00000510576 NRKQ7Z2Y5 1582 aa21.28■■□□□ 1
CLMAT3-201ENST00000510576 PMFBP1Q8TBY8 1022 aa21.27■■□□□ 1
CLMAT3-201ENST00000510576 ZRANB1Q9UGI0 708 aa21.27■■□□□ 1
CLMAT3-201ENST00000510576 CEBPAP49715 358 aaPredicted RBP21.27■□□□□ 0.99
CLMAT3-201ENST00000510576 SMC4Q9NTJ3 1288 aa21.27■□□□□ 0.99
CLMAT3-201ENST00000510576 EID1Q9Y6B2 187 aa21.27■□□□□ 0.99
CLMAT3-201ENST00000510576 SLIT1O75093 1534 aa21.26■□□□□ 0.99
CLMAT3-201ENST00000510576 IL13P35225 146 aa21.25■□□□□ 0.99
CLMAT3-201ENST00000510576 FTSJ3Q8IY81 847 aaKnown RBP21.25■□□□□ 0.99
CLMAT3-201ENST00000510576 KDM4FA0A1W2PPD8 638 aa21.24■□□□□ 0.99
CLMAT3-201ENST00000510576 MVPQ14764 893 aaKnown RBP21.24■□□□□ 0.99
CLMAT3-201ENST00000510576 NFE2L2Q16236 605 aa21.24■□□□□ 0.99
CLMAT3-201ENST00000510576 DZIP1LQ8IYY4 767 aaKnown RBP21.24■□□□□ 0.99
CLMAT3-201ENST00000510576 ARHGAP23Q9P227 1491 aa21.24■□□□□ 0.99
CLMAT3-201ENST00000510576 RIMS1Q86UR5 1692 aaKnown RBP21.24■□□□□ 0.99
CLMAT3-201ENST00000510576 HMOX1P09601 288 aa21.23■□□□□ 0.99
CLMAT3-201ENST00000510576 C8orf34Q49A92 452 aa21.23■□□□□ 0.99
CLMAT3-201ENST00000510576 DLG5Q8TDM6 1919 aa21.23■□□□□ 0.99
CLMAT3-201ENST00000510576 PTPRUQ92729 1446 aa21.22■□□□□ 0.99
CLMAT3-201ENST00000510576 SSH1Q8WYL5 1049 aa21.22■□□□□ 0.99
CLMAT3-201ENST00000510576 DDRGK1Q96HY6 314 aa21.21■□□□□ 0.99
CLMAT3-201ENST00000510576 DIP2AQ14689 1571 aa21.21■□□□□ 0.99
CLMAT3-201ENST00000510576 CALD1Q05682 793 aaKnown RBP21.21■□□□□ 0.99
CLMAT3-201ENST00000510576 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
CLMAT3-201ENST00000510576 SLC26A8Q96RN1 970 aa21.21■□□□□ 0.99
CLMAT3-201ENST00000510576 PCDHB15Q9Y5E8 787 aa21.21■□□□□ 0.99
CLMAT3-201ENST00000510576 RRS1Q15050 365 aaKnown RBP21.2■□□□□ 0.98
CLMAT3-201ENST00000510576 NALCNQ8IZF0 1738 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms