RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 GCC1Q96CN9 775 aa18.29■□□□□ 0.52
USP38-202ENST00000510377 TAOK2Q9UL54 1235 aa18.29■□□□□ 0.52
USP38-202ENST00000510377 STK31Q9BXU1 1019 aa18.29■□□□□ 0.52
USP38-202ENST00000510377 CT47B1P0C2W7 299 aaPredicted RBP18.28■□□□□ 0.52
USP38-202ENST00000510377 REC8O95072 547 aa18.28■□□□□ 0.52
USP38-202ENST00000510377 KIAA2012Q0VF49 1180 aa18.28■□□□□ 0.52
USP38-202ENST00000510377 TRAPPC8Q9Y2L5 1435 aa18.27■□□□□ 0.52
USP38-202ENST00000510377 KIAA1211Q6ZU35 1233 aa18.27■□□□□ 0.52
USP38-202ENST00000510377 NEK4P51957 841 aa18.27■□□□□ 0.51
USP38-202ENST00000510377 TBC1D9Q6ZT07 1266 aa18.26■□□□□ 0.51
USP38-202ENST00000510377 TRMT2AQ8IZ69 625 aaKnown RBP18.26■□□□□ 0.51
USP38-202ENST00000510377 LTV1Q96GA3 475 aaPredicted RBP18.26■□□□□ 0.51
USP38-202ENST00000510377 SMARCA5O60264 1052 aaPredicted RBP18.25■□□□□ 0.51
USP38-202ENST00000510377 SYAP1Q96A49 352 aaPredicted RBP18.25■□□□□ 0.51
USP38-202ENST00000510377 POLR3AO14802 1390 aaPredicted RBP18.25■□□□□ 0.51
USP38-202ENST00000510377 ADGBQ8N7X0 1667 aa18.25■□□□□ 0.51
USP38-202ENST00000510377 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.25■□□□□ 0.51
USP38-202ENST00000510377 CDK19Q9BWU1 502 aa18.25■□□□□ 0.51
USP38-202ENST00000510377 CIZ1Q9ULV3 898 aaPredicted RBP18.25■□□□□ 0.51
USP38-202ENST00000510377 CD109Q6YHK3 1445 aa18.24■□□□□ 0.51
USP38-202ENST00000510377 USP19O94966 1318 aa18.24■□□□□ 0.51
USP38-202ENST00000510377 RABEP1Q15276 862 aa18.24■□□□□ 0.51
USP38-202ENST00000510377 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
USP38-202ENST00000510377 CCDC173Q0VFZ6 552 aa18.24■□□□□ 0.51
USP38-202ENST00000510377 UBE2Q2Q8WVN8 375 aa18.24■□□□□ 0.51
USP38-202ENST00000510377 PLA2R1Q13018 1463 aa18.24■□□□□ 0.51
USP38-202ENST00000510377 RRS1Q15050 365 aaKnown RBP18.23■□□□□ 0.51
USP38-202ENST00000510377 GOLGA6L4A6NEF3 574 aa18.23■□□□□ 0.51
USP38-202ENST00000510377 HDAC1Q13547 482 aaPredicted RBP18.23■□□□□ 0.51
USP38-202ENST00000510377 DRC7Q8IY82 874 aa18.23■□□□□ 0.51
USP38-202ENST00000510377 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.22■□□□□ 0.51
USP38-202ENST00000510377 CHMP3Q9Y3E7 222 aa18.22■□□□□ 0.51
USP38-202ENST00000510377 INSRP06213 1382 aa18.22■□□□□ 0.51
USP38-202ENST00000510377 WDR7Q9Y4E6 1490 aa18.21■□□□□ 0.51
USP38-202ENST00000510377 CLCN1P35523 988 aa18.21■□□□□ 0.51
USP38-202ENST00000510377 NUCB1Q02818 461 aa18.21■□□□□ 0.51
USP38-202ENST00000510377 C14orf93Q9H972 538 aaKnown RBP18.2■□□□□ 0.5
USP38-202ENST00000510377 NAP1L2Q9ULW6 460 aaPredicted RBP18.2■□□□□ 0.5
USP38-202ENST00000510377 ABCC10Q5T3U5 1492 aa18.2■□□□□ 0.5
USP38-202ENST00000510377 EMILIN1Q9Y6C2 1016 aa18.2■□□□□ 0.5
USP38-202ENST00000510377 EIF2AK4Q9P2K8 1649 aaKnown RBP18.2■□□□□ 0.5
USP38-202ENST00000510377 FKBP5Q13451 457 aaPredicted RBP18.19■□□□□ 0.5
USP38-202ENST00000510377 ISY1Q9ULR0 285 aaKnown RBP18.19■□□□□ 0.5
USP38-202ENST00000510377 DUOX2Q9NRD8 1548 aa18.19■□□□□ 0.5
USP38-202ENST00000510377 FCHSD2O94868 740 aa18.19■□□□□ 0.5
USP38-202ENST00000510377 BMP2KLQ5H9B9 411 aa18.19■□□□□ 0.5
USP38-202ENST00000510377 GAS2L2Q8NHY3 880 aa18.19■□□□□ 0.5
USP38-202ENST00000510377 PKNOX2Q96KN3 472 aa18.19■□□□□ 0.5
USP38-202ENST00000510377 KDM5DQ9BY66 1539 aa18.19■□□□□ 0.5
USP38-202ENST00000510377 FAM83GA6ND36 823 aa18.18■□□□□ 0.5
USP38-202ENST00000510377 NFE2L2Q16236 605 aa18.18■□□□□ 0.5
USP38-202ENST00000510377 CHAF1AQ13111 956 aaPredicted RBP18.18■□□□□ 0.5
USP38-202ENST00000510377 SMC5Q8IY18 1101 aa18.18■□□□□ 0.5
USP38-202ENST00000510377 BAG4O95429 457 aaKnown RBP18.18■□□□□ 0.5
USP38-202ENST00000510377 FGD1P98174 961 aa18.18■□□□□ 0.5
USP38-202ENST00000510377 ZBTB40Q9NUA8 1239 aa18.18■□□□□ 0.5
USP38-202ENST00000510377 MIS18AQ9NYP9 233 aa18.18■□□□□ 0.5
USP38-202ENST00000510377 SULT6B1Q6IMI4 303 aa18.17■□□□□ 0.5
USP38-202ENST00000510377 WAPLQ7Z5K2 1190 aa18.17■□□□□ 0.5
USP38-202ENST00000510377 RBM27Q9P2N5 1060 aaKnown RBP18.17■□□□□ 0.5
USP38-202ENST00000510377 SYCE3A1L190 88 aa18.17■□□□□ 0.5
USP38-202ENST00000510377 AMPHP49418 695 aa18.17■□□□□ 0.5
USP38-202ENST00000510377 TSPYL6Q8N831 410 aa18.17■□□□□ 0.5
USP38-202ENST00000510377 CEP170Q5SW79 1584 aa18.17■□□□□ 0.5
USP38-202ENST00000510377 SLC4A2P04920 1241 aa18.17■□□□□ 0.5
USP38-202ENST00000510377 ZSCAN30Q86W11 494 aa18.17■□□□□ 0.5
USP38-202ENST00000510377 C16orf71Q8IYS4 520 aaPredicted RBP18.17■□□□□ 0.5
USP38-202ENST00000510377 ANTXR1Q9H6X2 564 aa18.17■□□□□ 0.5
USP38-202ENST00000510377 CCDC27Q2M243 656 aa18.17■□□□□ 0.5
USP38-202ENST00000510377 XPCQ01831 940 aaPredicted RBP18.16■□□□□ 0.5
USP38-202ENST00000510377 TSPYL4Q9UJ04 414 aa18.16■□□□□ 0.5
USP38-202ENST00000510377 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
USP38-202ENST00000510377 FYB1O15117 783 aa18.16■□□□□ 0.5
USP38-202ENST00000510377 RRP9O43818 475 aaKnown RBP18.16■□□□□ 0.5
USP38-202ENST00000510377 NPC1L1Q9UHC9 1359 aa18.15■□□□□ 0.5
USP38-202ENST00000510377 TPM2P07951 284 aa18.15■□□□□ 0.5
USP38-202ENST00000510377 ALDH1L2Q3SY69 923 aa18.15■□□□□ 0.5
USP38-202ENST00000510377 EXOC6BQ9Y2D4 811 aa18.15■□□□□ 0.5
USP38-202ENST00000510377 TSHZ3Q63HK5 1081 aa18.14■□□□□ 0.5
USP38-202ENST00000510377 EIF2S2P20042 333 aaKnown RBP18.14■□□□□ 0.49
USP38-202ENST00000510377 BCL11BQ9C0K0 894 aaPredicted RBP18.14■□□□□ 0.49
USP38-202ENST00000510377 PLCH2O75038 1416 aa18.14■□□□□ 0.49
USP38-202ENST00000510377 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.13■□□□□ 0.49
USP38-202ENST00000510377 IDI1Q13907 227 aa18.13■□□□□ 0.49
USP38-202ENST00000510377 MCM10Q7L590 875 aa18.13■□□□□ 0.49
USP38-202ENST00000510377 UPF3BQ9BZI7 483 aaKnown RBP18.13■□□□□ 0.49
USP38-202ENST00000510377 PHF14O94880 888 aa18.13■□□□□ 0.49
USP38-202ENST00000510377 TXNDC2Q86VQ3 553 aa18.13■□□□□ 0.49
USP38-202ENST00000510377 NME9Q86XW9 330 aa18.13■□□□□ 0.49
USP38-202ENST00000510377 ERC2O15083 957 aa18.12■□□□□ 0.49
USP38-202ENST00000510377 MAP4K4O95819 1239 aaPredicted RBP18.12■□□□□ 0.49
USP38-202ENST00000510377 MBIPQ9NS73 344 aa18.12■□□□□ 0.49
USP38-202ENST00000510377 NGDNQ8NEJ9 315 aaKnown RBP18.12■□□□□ 0.49
USP38-202ENST00000510377 TRIM35Q9UPQ4 493 aa18.12■□□□□ 0.49
USP38-202ENST00000510377 GDPD2Q9HCC8 539 aa18.11■□□□□ 0.49
USP38-202ENST00000510377 PHACTR3Q96KR7 559 aa18.11■□□□□ 0.49
USP38-202ENST00000510377 F6X3S4 739 aa18.11■□□□□ 0.49
USP38-202ENST00000510377 RAB3GAP1Q15042 981 aa18.11■□□□□ 0.49
USP38-202ENST00000510377 ABCC11Q96J66 1382 aa18.11■□□□□ 0.49
USP38-202ENST00000510377 VPS37CA5D8V6 355 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms