RNA–Protein interactions for RNA: ENST00000510335.5

PTPN20-224, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,153 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-224ENST00000510335 TMEM106CQ9BVX2 250 aa10.83□□□□□ -0.68
PTPN20-224ENST00000510335 ERCC6L2Q5T890 1561 aa10.82□□□□□ -0.68
PTPN20-224ENST00000510335 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
PTPN20-224ENST00000510335 DAXXQ9UER7 740 aaPredicted RBP10.82□□□□□ -0.68
PTPN20-224ENST00000510335 SALL2Q9Y467 1007 aaPredicted RBP10.82□□□□□ -0.68
PTPN20-224ENST00000510335 SPAG9O60271 1321 aaKnown RBP10.82□□□□□ -0.68
PTPN20-224ENST00000510335 NSD2O96028 1365 aa10.81□□□□□ -0.68
PTPN20-224ENST00000510335 RYDENQ9NUL5 291 aaKnown RBP10.81□□□□□ -0.68
PTPN20-224ENST00000510335 PHF8Q9UPP1 1060 aa10.81□□□□□ -0.68
PTPN20-224ENST00000510335 MROH2AA6NES4 1674 aa10.81□□□□□ -0.68
PTPN20-224ENST00000510335 PPRC1Q5VV67 1664 aaKnown RBP10.81□□□□□ -0.68
PTPN20-224ENST00000510335 ADGRB1O14514 1584 aa10.81□□□□□ -0.68
PTPN20-224ENST00000510335 CCDC27Q2M243 656 aa10.8□□□□□ -0.68
PTPN20-224ENST00000510335 USP19O94966 1318 aa10.8□□□□□ -0.68
PTPN20-224ENST00000510335 ZNF518AQ6AHZ1 1483 aa10.8□□□□□ -0.68
PTPN20-224ENST00000510335 SENP3-EIF4A1A0A087X0R7 540 aa10.79□□□□□ -0.68
PTPN20-224ENST00000510335 CLUAP1Q96AJ1 413 aa10.79□□□□□ -0.68
PTPN20-224ENST00000510335 PPLO60437 1756 aa10.79□□□□□ -0.68
PTPN20-224ENST00000510335 CENPJQ9HC77 1338 aaPredicted RBP10.79□□□□□ -0.68
PTPN20-224ENST00000510335 QRICH2Q9H0J4 1663 aa10.79□□□□□ -0.68
PTPN20-224ENST00000510335 PPP1R37O75864 691 aa10.78□□□□□ -0.68
PTPN20-224ENST00000510335 CT47B1P0C2W7 299 aaPredicted RBP10.78□□□□□ -0.68
PTPN20-224ENST00000510335 IL27Q8NEV9 243 aa10.78□□□□□ -0.68
PTPN20-224ENST00000510335 FBXO22Q8NEZ5 403 aa10.78□□□□□ -0.68
PTPN20-224ENST00000510335 PMFBP1Q8TBY8 1022 aa10.78□□□□□ -0.68
PTPN20-224ENST00000510335 CFAP74Q9C0B2 1584 aa10.77□□□□□ -0.68
PTPN20-224ENST00000510335 SOX12O15370 315 aa10.77□□□□□ -0.69
PTPN20-224ENST00000510335 BECN1Q14457 450 aa10.77□□□□□ -0.69
PTPN20-224ENST00000510335 WDR63Q8IWG1 891 aa10.77□□□□□ -0.69
PTPN20-224ENST00000510335 HECW2Q9P2P5 1572 aa10.77□□□□□ -0.69
PTPN20-224ENST00000510335 PIK3C2BO00750 1634 aa10.76□□□□□ -0.69
PTPN20-224ENST00000510335 BMP2KQ9NSY1 1161 aaPredicted RBP10.76□□□□□ -0.69
PTPN20-224ENST00000510335 TTLL13PA6NNM8 815 aa10.75□□□□□ -0.69
PTPN20-224ENST00000510335 APAF1O14727 1248 aa10.75□□□□□ -0.69
PTPN20-224ENST00000510335 NLRP6P59044 892 aa10.75□□□□□ -0.69
PTPN20-224ENST00000510335 FAM43AQ8N2R8 423 aa10.75□□□□□ -0.69
PTPN20-224ENST00000510335 FRAT1Q92837 279 aaPredicted RBP10.75□□□□□ -0.69
PTPN20-224ENST00000510335 NSD3Q9BZ95 1437 aa10.75□□□□□ -0.69
PTPN20-224ENST00000510335 MED14O60244 1454 aa10.74□□□□□ -0.69
PTPN20-224ENST00000510335 TIE1P35590 1138 aa10.74□□□□□ -0.69
PTPN20-224ENST00000510335 CADPS2Q86UW7 1296 aa10.74□□□□□ -0.69
PTPN20-224ENST00000510335 SKAP1Q86WV1 359 aa10.74□□□□□ -0.69
PTPN20-224ENST00000510335 WWC1Q8IX03 1113 aa10.74□□□□□ -0.69
PTPN20-224ENST00000510335 RUNDC1Q96C34 613 aa10.74□□□□□ -0.69
PTPN20-224ENST00000510335 RPGRIP1LQ68CZ1 1315 aa10.74□□□□□ -0.69
PTPN20-224ENST00000510335 KIDINS220Q9ULH0 1771 aa10.74□□□□□ -0.69
PTPN20-224ENST00000510335 REREQ9P2R6 1566 aa10.73□□□□□ -0.69
PTPN20-224ENST00000510335 CARD14Q9BXL6 1004 aa10.73□□□□□ -0.69
PTPN20-224ENST00000510335 CDC42BPGQ6DT37 1551 aa10.73□□□□□ -0.69
PTPN20-224ENST00000510335 UGGT1Q9NYU2 1555 aa10.73□□□□□ -0.69
PTPN20-224ENST00000510335 ANKRD26Q9UPS8 1709 aa10.72□□□□□ -0.69
PTPN20-224ENST00000510335 BCAR3O75815 825 aa10.72□□□□□ -0.69
PTPN20-224ENST00000510335 RARSP54136 660 aaKnown RBP10.72□□□□□ -0.69
PTPN20-224ENST00000510335 MS4A4AQ96JQ5 239 aa10.72□□□□□ -0.69
PTPN20-224ENST00000510335 TBC1D32Q96NH3 1257 aa10.72□□□□□ -0.69
PTPN20-224ENST00000510335 ANTXR1Q9H6X2 564 aa10.72□□□□□ -0.69
PTPN20-224ENST00000510335 ANKRD36BQ8N2N9 1353 aa10.72□□□□□ -0.69
PTPN20-224ENST00000510335 ABCC11Q96J66 1382 aa10.72□□□□□ -0.69
PTPN20-224ENST00000510335 ARHGEF28Q8N1W1 1705 aaKnown RBP10.72□□□□□ -0.69
PTPN20-224ENST00000510335 IGHDP01880 384 aa10.71□□□□□ -0.69
PTPN20-224ENST00000510335 GLI2P10070 1586 aa10.71□□□□□ -0.69
PTPN20-224ENST00000510335 CLTCQ00610 1675 aaKnown RBP10.71□□□□□ -0.69
PTPN20-224ENST00000510335 L1TD1Q5T7N2 865 aaKnown RBP10.71□□□□□ -0.69
PTPN20-224ENST00000510335 MLH3Q9UHC1 1453 aa10.71□□□□□ -0.69
PTPN20-224ENST00000510335 FRMPD1Q5SYB0 1578 aa10.7□□□□□ -0.7
PTPN20-224ENST00000510335 TULP4Q9NRJ4 1543 aa10.7□□□□□ -0.7
PTPN20-224ENST00000510335 COL3A1P02461 1466 aaPredicted RBP10.7□□□□□ -0.7
PTPN20-224ENST00000510335 ZFYVE9O95405 1425 aa10.7□□□□□ -0.7
PTPN20-224ENST00000510335 ADGRF5Q8IZF2 1346 aa10.7□□□□□ -0.7
PTPN20-224ENST00000510335 FRAT2O75474 233 aaPredicted RBP10.7□□□□□ -0.7
PTPN20-224ENST00000510335 RGS3P49796 1198 aa10.7□□□□□ -0.7
PTPN20-224ENST00000510335 CCDC146Q8IYE0 955 aa10.7□□□□□ -0.7
PTPN20-224ENST00000510335 UPF2Q9HAU5 1272 aaKnown RBP10.7□□□□□ -0.7
PTPN20-224ENST00000510335 CAMSAP1Q5T5Y3 1602 aa10.69□□□□□ -0.7
PTPN20-224ENST00000510335 ABCC3O15438 1527 aa10.69□□□□□ -0.7
PTPN20-224ENST00000510335 NOS1P29475 1434 aa10.69□□□□□ -0.7
PTPN20-224ENST00000510335 NCOA3Q9Y6Q9 1424 aa10.69□□□□□ -0.7
PTPN20-224ENST00000510335 IL16Q14005 1332 aa10.69□□□□□ -0.7
PTPN20-224ENST00000510335 MKRN3Q13064 507 aaKnown RBP10.69□□□□□ -0.7
PTPN20-224ENST00000510335 MYH16Q9H6N6 1097 aa10.69□□□□□ -0.7
PTPN20-224ENST00000510335 C14orf93Q9H972 538 aaKnown RBP10.69□□□□□ -0.7
PTPN20-224ENST00000510335 BRPF3Q9ULD4 1205 aa10.69□□□□□ -0.7
PTPN20-224ENST00000510335 CFAP70Q5T0N1 1121 aa10.68□□□□□ -0.7
PTPN20-224ENST00000510335 CFAP53Q96M91 514 aa10.68□□□□□ -0.7
PTPN20-224ENST00000510335 RWDD1Q9H446 243 aaPredicted RBP10.68□□□□□ -0.7
PTPN20-224ENST00000510335 ISY1Q9ULR0 285 aaKnown RBP10.68□□□□□ -0.7
PTPN20-224ENST00000510335 TRIM35Q9UPQ4 493 aa10.68□□□□□ -0.7
PTPN20-224ENST00000510335 NEXMIFQ5QGS0 1516 aa10.68□□□□□ -0.7
PTPN20-224ENST00000510335 NPATQ14207 1427 aa10.67□□□□□ -0.7
PTPN20-224ENST00000510335 ARHGAP31Q2M1Z3 1444 aa10.67□□□□□ -0.7
PTPN20-224ENST00000510335 POGZQ7Z3K3 1410 aa10.67□□□□□ -0.7
PTPN20-224ENST00000510335 GABBR2O75899 941 aa10.67□□□□□ -0.7
PTPN20-224ENST00000510335 CANXP27824 592 aaKnown RBP10.67□□□□□ -0.7
PTPN20-224ENST00000510335 SLC4A3P48751 1232 aa10.67□□□□□ -0.7
PTPN20-224ENST00000510335 HDAC1Q13547 482 aaPredicted RBP10.67□□□□□ -0.7
PTPN20-224ENST00000510335 RSPH6AQ9H0K4 717 aa10.67□□□□□ -0.7
PTPN20-224ENST00000510335 CLCN6P51797 869 aa10.66□□□□□ -0.7
PTPN20-224ENST00000510335 ATN1P54259 1190 aaPredicted RBP10.66□□□□□ -0.7
PTPN20-224ENST00000510335 MVPQ14764 893 aaKnown RBP10.66□□□□□ -0.7
PTPN20-224ENST00000510335 AFAP1Q8N556 730 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms