RNA–Protein interactions for RNA: ENST00000509982.5

CDK11A-223, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 2,306 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-223ENST00000509982 HDGFL2Q7Z4V5 671 aaPredicted RBP23.85■■□□□ 1.41
CDK11A-223ENST00000509982 A2ML1A8K2U0 1454 aa23.84■■□□□ 1.41
CDK11A-223ENST00000509982 WAPLQ7Z5K2 1190 aa23.83■■□□□ 1.41
CDK11A-223ENST00000509982 MAPK8IP3Q9UPT6 1336 aa23.83■■□□□ 1.41
CDK11A-223ENST00000509982 AGLP35573 1532 aa23.83■■□□□ 1.4
CDK11A-223ENST00000509982 VIRMAQ69YN4 1812 aaKnown RBP23.83■■□□□ 1.4
CDK11A-223ENST00000509982 REREQ9P2R6 1566 aa23.83■■□□□ 1.4
CDK11A-223ENST00000509982 PPM1GO15355 546 aaPredicted RBP23.82■■□□□ 1.4
CDK11A-223ENST00000509982 EXOSC9Q06265 439 aaKnown RBP23.82■■□□□ 1.4
CDK11A-223ENST00000509982 AAMPQ13685 434 aa23.82■■□□□ 1.4
CDK11A-223ENST00000509982 PMFBP1Q8TBY8 1022 aa23.82■■□□□ 1.4
CDK11A-223ENST00000509982 PNPLA6Q8IY17 1366 aa23.82■■□□□ 1.4
CDK11A-223ENST00000509982 DIAPH1O60610 1272 aaKnown RBP23.81■■□□□ 1.4
CDK11A-223ENST00000509982 KIF20BQ96Q89 1820 aa23.81■■□□□ 1.4
CDK11A-223ENST00000509982 SPATA31D1Q6ZQQ2 1576 aa23.8■■□□□ 1.4
CDK11A-223ENST00000509982 RIMS2Q9UQ26 1411 aa23.8■■□□□ 1.4
CDK11A-223ENST00000509982 FBLN1P23142 703 aa23.79■■□□□ 1.4
CDK11A-223ENST00000509982 MVPQ14764 893 aaKnown RBP23.79■■□□□ 1.4
CDK11A-223ENST00000509982 ZKSCAN2Q63HK3 967 aa23.79■■□□□ 1.4
CDK11A-223ENST00000509982 RIMBP3CA6NJZ7 1639 aa23.79■■□□□ 1.4
CDK11A-223ENST00000509982 RIMBP3BA6NNM3 1639 aa23.79■■□□□ 1.4
CDK11A-223ENST00000509982 RIMBP3Q9UFD9 1639 aa23.79■■□□□ 1.4
CDK11A-223ENST00000509982 SETD1AO15047 1707 aaKnown RBP23.79■■□□□ 1.4
CDK11A-223ENST00000509982 CT47B1P0C2W7 299 aaPredicted RBP23.79■■□□□ 1.4
CDK11A-223ENST00000509982 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.79■■□□□ 1.4
CDK11A-223ENST00000509982 USP19O94966 1318 aa23.79■■□□□ 1.4
CDK11A-223ENST00000509982 DLC1Q96QB1 1528 aa23.79■■□□□ 1.4
CDK11A-223ENST00000509982 MLECQ14165 292 aa23.78■■□□□ 1.4
CDK11A-223ENST00000509982 USP35Q9P2H5 1018 aa23.78■■□□□ 1.4
CDK11A-223ENST00000509982 RIPK4P57078 832 aa23.78■■□□□ 1.4
CDK11A-223ENST00000509982 PPP6R1Q9UPN7 881 aa23.78■■□□□ 1.4
CDK11A-223ENST00000509982 SEC24BO95487 1268 aa23.77■■□□□ 1.4
CDK11A-223ENST00000509982 DZIP1LQ8IYY4 767 aaKnown RBP23.77■■□□□ 1.4
CDK11A-223ENST00000509982 SMC4Q9NTJ3 1288 aa23.77■■□□□ 1.4
CDK11A-223ENST00000509982 DAXXQ9UER7 740 aaPredicted RBP23.77■■□□□ 1.4
CDK11A-223ENST00000509982 SSH1Q8WYL5 1049 aa23.76■■□□□ 1.39
CDK11A-223ENST00000509982 FTSJ3Q8IY81 847 aaKnown RBP23.76■■□□□ 1.39
CDK11A-223ENST00000509982 PDZRN3Q9UPQ7 1066 aa23.76■■□□□ 1.39
CDK11A-223ENST00000509982 IL16Q14005 1332 aa23.75■■□□□ 1.39
CDK11A-223ENST00000509982 ATP7BP35670 1465 aa23.74■■□□□ 1.39
CDK11A-223ENST00000509982 LRRC7Q96NW7 1537 aa23.74■■□□□ 1.39
CDK11A-223ENST00000509982 TRIM27P14373 513 aa23.74■■□□□ 1.39
CDK11A-223ENST00000509982 POLKQ9UBT6 870 aa23.74■■□□□ 1.39
CDK11A-223ENST00000509982 RWDD1Q9H446 243 aaPredicted RBP23.73■■□□□ 1.39
CDK11A-223ENST00000509982 CDC42BPGQ6DT37 1551 aa23.73■■□□□ 1.39
CDK11A-223ENST00000509982 NRXN3Q9Y4C0 1643 aa23.71■■□□□ 1.39
CDK11A-223ENST00000509982 RSPH6AQ9H0K4 717 aa23.71■■□□□ 1.39
CDK11A-223ENST00000509982 FCHSD2O94868 740 aa23.7■■□□□ 1.38
CDK11A-223ENST00000509982 METP08581 1390 aa23.7■■□□□ 1.38
CDK11A-223ENST00000509982 PRKAR2BP31323 418 aa23.7■■□□□ 1.38
CDK11A-223ENST00000509982 ATF7IPQ6VMQ6 1270 aa23.69■■□□□ 1.38
CDK11A-223ENST00000509982 PNNQ9H307 717 aaKnown RBP23.69■■□□□ 1.38
CDK11A-223ENST00000509982 NOB1Q9ULX3 412 aaKnown RBP23.69■■□□□ 1.38
CDK11A-223ENST00000509982 FAM135BQ49AJ0 1406 aa23.69■■□□□ 1.38
CDK11A-223ENST00000509982 NFKBIBQ15653 356 aa23.68■■□□□ 1.38
CDK11A-223ENST00000509982 CPSF1Q10570 1443 aaKnown RBP23.67■■□□□ 1.38
CDK11A-223ENST00000509982 WASLO00401 505 aaPredicted RBP23.67■■□□□ 1.38
CDK11A-223ENST00000509982 ITPRIPQ8IWB1 547 aa23.67■■□□□ 1.38
CDK11A-223ENST00000509982 PPIP5K1Q6PFW1 1433 aa23.66■■□□□ 1.38
CDK11A-223ENST00000509982 EMILIN1Q9Y6C2 1016 aa23.66■■□□□ 1.38
CDK11A-223ENST00000509982 ZMYM3Q14202 1370 aa23.66■■□□□ 1.38
CDK11A-223ENST00000509982 MAP2P11137 1827 aaKnown RBP23.66■■□□□ 1.38
CDK11A-223ENST00000509982 TXNDC2Q86VQ3 553 aa23.66■■□□□ 1.38
CDK11A-223ENST00000509982 NME9Q86XW9 330 aa23.66■■□□□ 1.38
CDK11A-223ENST00000509982 HMOX1P09601 288 aa23.65■■□□□ 1.38
CDK11A-223ENST00000509982 PHACTR3Q96KR7 559 aa23.65■■□□□ 1.38
CDK11A-223ENST00000509982 ZRANB1Q9UGI0 708 aa23.65■■□□□ 1.38
CDK11A-223ENST00000509982 NCKAP5LQ9HCH0 1330 aa23.65■■□□□ 1.38
CDK11A-223ENST00000509982 EDC4Q6P2E9 1401 aaKnown RBP23.65■■□□□ 1.38
CDK11A-223ENST00000509982 TMEM57Q8N5G2 664 aa23.64■■□□□ 1.38
CDK11A-223ENST00000509982 DDX19BQ9UMR2 479 aa23.64■■□□□ 1.38
CDK11A-223ENST00000509982 THUMPD2Q9BTF0 503 aaKnown RBP23.61■■□□□ 1.37
CDK11A-223ENST00000509982 KIF16BQ96L93 1317 aa23.61■■□□□ 1.37
CDK11A-223ENST00000509982 HDAC1Q13547 482 aaPredicted RBP23.61■■□□□ 1.37
CDK11A-223ENST00000509982 IL13P35225 146 aa23.6■■□□□ 1.37
CDK11A-223ENST00000509982 NFE2L2Q16236 605 aa23.6■■□□□ 1.37
CDK11A-223ENST00000509982 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.6■■□□□ 1.37
CDK11A-223ENST00000509982 NUDT16Q96DE0 195 aaKnown RBP23.6■■□□□ 1.37
CDK11A-223ENST00000509982 CPS1P31327 1500 aa23.59■■□□□ 1.37
CDK11A-223ENST00000509982 ALDH1L2Q3SY69 923 aa23.59■■□□□ 1.37
CDK11A-223ENST00000509982 ZBTB40Q9NUA8 1239 aa23.59■■□□□ 1.37
CDK11A-223ENST00000509982 CDK12Q9NYV4 1490 aaPredicted RBP23.58■■□□□ 1.37
CDK11A-223ENST00000509982 IPO8O15397 1037 aaKnown RBP23.56■■□□□ 1.36
CDK11A-223ENST00000509982 TBC1D32Q96NH3 1257 aa23.56■■□□□ 1.36
CDK11A-223ENST00000509982 RRS1Q15050 365 aaKnown RBP23.56■■□□□ 1.36
CDK11A-223ENST00000509982 ESF1Q9H501 851 aaKnown RBP23.56■■□□□ 1.36
CDK11A-223ENST00000509982 TECPR2O15040 1411 aa23.56■■□□□ 1.36
CDK11A-223ENST00000509982 AATKQ6ZMQ8 1374 aa23.55■■□□□ 1.36
CDK11A-223ENST00000509982 KNDC1Q76NI1 1749 aa23.55■■□□□ 1.36
CDK11A-223ENST00000509982 CCDC61Q9Y6R9 512 aa23.55■■□□□ 1.36
CDK11A-223ENST00000509982 MON2Q7Z3U7 1717 aa23.55■■□□□ 1.36
CDK11A-223ENST00000509982 SMC5Q8IY18 1101 aa23.54■■□□□ 1.36
CDK11A-223ENST00000509982 FRAT2O75474 233 aaPredicted RBP23.54■■□□□ 1.36
CDK11A-223ENST00000509982 TSPYL6Q8N831 410 aa23.54■■□□□ 1.36
CDK11A-223ENST00000509982 COG3Q96JB2 828 aa23.54■■□□□ 1.36
CDK11A-223ENST00000509982 UPF2Q9HAU5 1272 aaKnown RBP23.54■■□□□ 1.36
CDK11A-223ENST00000509982 PRR36Q9H6K5 1346 aa23.54■■□□□ 1.36
CDK11A-223ENST00000509982 VAMP4O75379 141 aa23.53■■□□□ 1.36
CDK11A-223ENST00000509982 BRPF1P55201 1214 aaPredicted RBP23.51■■□□□ 1.35
CDK11A-223ENST00000509982 SIRT1Q96EB6 747 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms