RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 XPCQ01831 940 aaPredicted RBP12.43□□□□□ -0.42
SMAD1-207ENST00000507594 CNGB1Q14028 1251 aaPredicted RBP12.43□□□□□ -0.42
SMAD1-207ENST00000507594 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
SMAD1-207ENST00000507594 BRINP3Q76B58 766 aa12.43□□□□□ -0.42
SMAD1-207ENST00000507594 KTN1Q86UP2 1357 aaKnown RBP12.43□□□□□ -0.42
SMAD1-207ENST00000507594 NPHP3Q7Z494 1330 aa12.42□□□□□ -0.42
SMAD1-207ENST00000507594 FOXO3O43524 673 aa12.42□□□□□ -0.42
SMAD1-207ENST00000507594 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
SMAD1-207ENST00000507594 DDX10Q13206 875 aaKnown RBP12.41□□□□□ -0.42
SMAD1-207ENST00000507594 ANKRD36BQ8N2N9 1353 aa12.41□□□□□ -0.42
SMAD1-207ENST00000507594 AKAP12Q02952 1782 aa12.41□□□□□ -0.42
SMAD1-207ENST00000507594 PHLPP1O60346 1717 aa12.4□□□□□ -0.42
SMAD1-207ENST00000507594 PLEKHG3A1L390 1219 aa12.4□□□□□ -0.42
SMAD1-207ENST00000507594 DDX17Q92841 729 aaKnown RBP12.4□□□□□ -0.42
SMAD1-207ENST00000507594 PANK3Q9H999 370 aa12.4□□□□□ -0.42
SMAD1-207ENST00000507594 A0A1W2PP64 1363 aa12.4□□□□□ -0.42
SMAD1-207ENST00000507594 NSD3Q9BZ95 1437 aa12.39□□□□□ -0.43
SMAD1-207ENST00000507594 KRT28Q7Z3Y7 464 aa12.39□□□□□ -0.43
SMAD1-207ENST00000507594 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMAD1-207ENST00000507594 MON2Q7Z3U7 1717 aa12.39□□□□□ -0.43
SMAD1-207ENST00000507594 NHSL1Q5SYE7 1610 aa12.38□□□□□ -0.43
SMAD1-207ENST00000507594 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
SMAD1-207ENST00000507594 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
SMAD1-207ENST00000507594 KNSTRNQ9Y448 316 aa12.38□□□□□ -0.43
SMAD1-207ENST00000507594 POLR3AO14802 1390 aaPredicted RBP12.37□□□□□ -0.43
SMAD1-207ENST00000507594 USP6P35125 1406 aa12.37□□□□□ -0.43
SMAD1-207ENST00000507594 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
SMAD1-207ENST00000507594 KIF20BQ96Q89 1820 aa12.36□□□□□ -0.43
SMAD1-207ENST00000507594 AHDC1Q5TGY3 1603 aaPredicted RBP12.36□□□□□ -0.43
SMAD1-207ENST00000507594 EDC4Q6P2E9 1401 aaKnown RBP12.36□□□□□ -0.43
SMAD1-207ENST00000507594 CD163L1Q9NR16 1453 aa12.35□□□□□ -0.43
SMAD1-207ENST00000507594 NUTM2GQ5VZR2 741 aa12.35□□□□□ -0.43
SMAD1-207ENST00000507594 CGNL1Q0VF96 1302 aa12.35□□□□□ -0.43
SMAD1-207ENST00000507594 NRKQ7Z2Y5 1582 aa12.35□□□□□ -0.43
SMAD1-207ENST00000507594 ABTB2Q8N961 1025 aa12.34□□□□□ -0.43
SMAD1-207ENST00000507594 CPSF1Q10570 1443 aaKnown RBP12.34□□□□□ -0.43
SMAD1-207ENST00000507594 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
SMAD1-207ENST00000507594 TTC21BQ7Z4L5 1316 aa12.34□□□□□ -0.43
SMAD1-207ENST00000507594 PXDNQ92626 1479 aa12.34□□□□□ -0.43
SMAD1-207ENST00000507594 SOX12O15370 315 aa12.33□□□□□ -0.44
SMAD1-207ENST00000507594 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
SMAD1-207ENST00000507594 TTC21AQ8NDW8 1320 aa12.33□□□□□ -0.44
SMAD1-207ENST00000507594 ARHGEF10O15013 1369 aa12.32□□□□□ -0.44
SMAD1-207ENST00000507594 TRPM3Q9HCF6 1732 aaPredicted RBP12.32□□□□□ -0.44
SMAD1-207ENST00000507594 ZBTB7CA1YPR0 619 aa12.32□□□□□ -0.44
SMAD1-207ENST00000507594 NLRP6P59044 892 aa12.32□□□□□ -0.44
SMAD1-207ENST00000507594 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
SMAD1-207ENST00000507594 NME9Q86XW9 330 aa12.32□□□□□ -0.44
SMAD1-207ENST00000507594 FBXO41Q8TF61 875 aa12.32□□□□□ -0.44
SMAD1-207ENST00000507594 LRRC59Q96AG4 307 aaKnown RBP12.32□□□□□ -0.44
SMAD1-207ENST00000507594 SBNO1A3KN83 1393 aa12.31□□□□□ -0.44
SMAD1-207ENST00000507594 BRD4O60885 1362 aaPredicted RBP12.31□□□□□ -0.44
SMAD1-207ENST00000507594 COL16A1Q07092 1604 aaPredicted RBP12.31□□□□□ -0.44
SMAD1-207ENST00000507594 HSPA1LP34931 641 aa12.31□□□□□ -0.44
SMAD1-207ENST00000507594 COG3Q96JB2 828 aa12.31□□□□□ -0.44
SMAD1-207ENST00000507594 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
SMAD1-207ENST00000507594 GGNBP2Q9H3C7 697 aa12.31□□□□□ -0.44
SMAD1-207ENST00000507594 SOS2Q07890 1332 aaPredicted RBP12.31□□□□□ -0.44
SMAD1-207ENST00000507594 PIK3C2AO00443 1686 aa12.3□□□□□ -0.44
SMAD1-207ENST00000507594 SPATA31A3Q5VYP0 1347 aa12.3□□□□□ -0.44
SMAD1-207ENST00000507594 TNNT2P45379 298 aaPredicted RBP12.29□□□□□ -0.44
SMAD1-207ENST00000507594 MORC1Q86VD1 984 aa12.29□□□□□ -0.44
SMAD1-207ENST00000507594 NLRP13Q86W25 1043 aa12.29□□□□□ -0.44
SMAD1-207ENST00000507594 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
SMAD1-207ENST00000507594 ALS2Q96Q42 1657 aa12.29□□□□□ -0.44
SMAD1-207ENST00000507594 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
SMAD1-207ENST00000507594 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
SMAD1-207ENST00000507594 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
SMAD1-207ENST00000507594 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
SMAD1-207ENST00000507594 NSD2O96028 1365 aa12.28□□□□□ -0.44
SMAD1-207ENST00000507594 ANP32CO43423 234 aa12.27□□□□□ -0.45
SMAD1-207ENST00000507594 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.45
SMAD1-207ENST00000507594 JCADQ9P266 1359 aa12.27□□□□□ -0.45
SMAD1-207ENST00000507594 FYB1O15117 783 aa12.26□□□□□ -0.45
SMAD1-207ENST00000507594 POLA2Q14181 598 aa12.26□□□□□ -0.45
SMAD1-207ENST00000507594 MEX3CQ5U5Q3 659 aaKnown RBP12.26□□□□□ -0.45
SMAD1-207ENST00000507594 DIEXFQ68CQ4 756 aaKnown RBP12.26□□□□□ -0.45
SMAD1-207ENST00000507594 CABLES1Q8TDN4 633 aa12.26□□□□□ -0.45
SMAD1-207ENST00000507594 PNPLA6Q8IY17 1366 aa12.26□□□□□ -0.45
SMAD1-207ENST00000507594 SSH2Q76I76 1423 aa12.26□□□□□ -0.45
SMAD1-207ENST00000507594 SHPRHQ149N8 1683 aa12.26□□□□□ -0.45
SMAD1-207ENST00000507594 PHRF1Q9P1Y6 1649 aaKnown RBP12.25□□□□□ -0.45
SMAD1-207ENST00000507594 PPM1GO15355 546 aaPredicted RBP12.24□□□□□ -0.45
SMAD1-207ENST00000507594 MED1Q15648 1581 aaPredicted RBP12.24□□□□□ -0.45
SMAD1-207ENST00000507594 KCNH5Q8NCM2 988 aa12.24□□□□□ -0.45
SMAD1-207ENST00000507594 ABCA3Q99758 1704 aa12.23□□□□□ -0.45
SMAD1-207ENST00000507594 OVOS2A0A0J9YW53 1432 aa12.23□□□□□ -0.45
SMAD1-207ENST00000507594 OVOS2Q6IE36 1432 aa12.23□□□□□ -0.45
SMAD1-207ENST00000507594 USP31Q70CQ4 1352 aa12.23□□□□□ -0.45
SMAD1-207ENST00000507594 PER1O15534 1290 aaPredicted RBP12.23□□□□□ -0.45
SMAD1-207ENST00000507594 ADAMTS2O95450 1211 aa12.23□□□□□ -0.45
SMAD1-207ENST00000507594 RNF39Q9H2S5 420 aa12.23□□□□□ -0.45
SMAD1-207ENST00000507594 COL22A1Q8NFW1 1626 aaPredicted RBP12.22□□□□□ -0.45
SMAD1-207ENST00000507594 ZC3H6P61129 1189 aaKnown RBP12.22□□□□□ -0.45
SMAD1-207ENST00000507594 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
SMAD1-207ENST00000507594 USP54Q70EL1 1684 aa12.22□□□□□ -0.45
SMAD1-207ENST00000507594 NPC1L1Q9UHC9 1359 aa12.21□□□□□ -0.45
SMAD1-207ENST00000507594 MARF1Q9Y4F3 1742 aaKnown RBP12.21□□□□□ -0.45
SMAD1-207ENST00000507594 AMPHP49418 695 aa12.21□□□□□ -0.45
SMAD1-207ENST00000507594 PRDM11Q9NQV5 511 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms