RNA–Protein interactions for RNA: ENST00000507232.5

SPDL1-206, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 1 (best)

Gene SPDL1, Length 2,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-206ENST00000507232 RIMS2Q9UQ26 1411 aa16.7■□□□□ 0.26
SPDL1-206ENST00000507232 A2ML1A8K2U0 1454 aa16.7■□□□□ 0.26
SPDL1-206ENST00000507232 ZRANB1Q9UGI0 708 aa16.7■□□□□ 0.26
SPDL1-206ENST00000507232 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
SPDL1-206ENST00000507232 RIPK4P57078 832 aa16.69■□□□□ 0.26
SPDL1-206ENST00000507232 TXNDC2Q86VQ3 553 aa16.69■□□□□ 0.26
SPDL1-206ENST00000507232 NINLQ9Y2I6 1382 aa16.69■□□□□ 0.26
SPDL1-206ENST00000507232 COL3A1P02461 1466 aaPredicted RBP16.69■□□□□ 0.26
SPDL1-206ENST00000507232 NLRP1Q9C000 1473 aa16.69■□□□□ 0.26
SPDL1-206ENST00000507232 ARHGEF40Q8TER5 1519 aa16.69■□□□□ 0.26
SPDL1-206ENST00000507232 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
SPDL1-206ENST00000507232 ADGRB2O60241 1585 aa16.67■□□□□ 0.26
SPDL1-206ENST00000507232 HMOX1P09601 288 aa16.67■□□□□ 0.26
SPDL1-206ENST00000507232 SMC4Q9NTJ3 1288 aa16.67■□□□□ 0.26
SPDL1-206ENST00000507232 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
SPDL1-206ENST00000507232 METP08581 1390 aa16.66■□□□□ 0.26
SPDL1-206ENST00000507232 NME9Q86XW9 330 aa16.66■□□□□ 0.26
SPDL1-206ENST00000507232 FTSJ3Q8IY81 847 aaKnown RBP16.66■□□□□ 0.26
SPDL1-206ENST00000507232 ESF1Q9H501 851 aaKnown RBP16.66■□□□□ 0.26
SPDL1-206ENST00000507232 SEC24BO95487 1268 aa16.65■□□□□ 0.26
SPDL1-206ENST00000507232 NEFMP07197 916 aa16.65■□□□□ 0.26
SPDL1-206ENST00000507232 DDRGK1Q96HY6 314 aa16.65■□□□□ 0.26
SPDL1-206ENST00000507232 ANKRD26Q9UPS8 1709 aa16.65■□□□□ 0.26
SPDL1-206ENST00000507232 POLKQ9UBT6 870 aa16.64■□□□□ 0.25
SPDL1-206ENST00000507232 EMILIN1Q9Y6C2 1016 aa16.64■□□□□ 0.25
SPDL1-206ENST00000507232 KIF20BQ96Q89 1820 aa16.64■□□□□ 0.25
SPDL1-206ENST00000507232 PRKAR2BP31323 418 aa16.64■□□□□ 0.25
SPDL1-206ENST00000507232 SSH1Q8WYL5 1049 aa16.64■□□□□ 0.25
SPDL1-206ENST00000507232 THUMPD2Q9BTF0 503 aaKnown RBP16.64■□□□□ 0.25
SPDL1-206ENST00000507232 ZKSCAN2Q63HK3 967 aa16.63■□□□□ 0.25
SPDL1-206ENST00000507232 NUTM2FA1L443 756 aa16.63■□□□□ 0.25
SPDL1-206ENST00000507232 MVPQ14764 893 aaKnown RBP16.62■□□□□ 0.25
SPDL1-206ENST00000507232 DZIP1LQ8IYY4 767 aaKnown RBP16.62■□□□□ 0.25
SPDL1-206ENST00000507232 PHACTR3Q96KR7 559 aa16.62■□□□□ 0.25
SPDL1-206ENST00000507232 BCL11AQ9H165 835 aa16.62■□□□□ 0.25
SPDL1-206ENST00000507232 DAXXQ9UER7 740 aaPredicted RBP16.62■□□□□ 0.25
SPDL1-206ENST00000507232 NOB1Q9ULX3 412 aaKnown RBP16.62■□□□□ 0.25
SPDL1-206ENST00000507232 SPATA31D1Q6ZQQ2 1576 aa16.62■□□□□ 0.25
SPDL1-206ENST00000507232 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
SPDL1-206ENST00000507232 PPIP5K1Q6PFW1 1433 aa16.61■□□□□ 0.25
SPDL1-206ENST00000507232 WASLO00401 505 aaPredicted RBP16.61■□□□□ 0.25
SPDL1-206ENST00000507232 ITPRIPQ8IWB1 547 aa16.61■□□□□ 0.25
SPDL1-206ENST00000507232 ZMYM3Q14202 1370 aa16.61■□□□□ 0.25
SPDL1-206ENST00000507232 AGLP35573 1532 aa16.6■□□□□ 0.25
SPDL1-206ENST00000507232 SETD1AO15047 1707 aaKnown RBP16.6■□□□□ 0.25
SPDL1-206ENST00000507232 TRIM27P14373 513 aa16.6■□□□□ 0.25
SPDL1-206ENST00000507232 RRS1Q15050 365 aaKnown RBP16.6■□□□□ 0.25
SPDL1-206ENST00000507232 PMFBP1Q8TBY8 1022 aa16.6■□□□□ 0.25
SPDL1-206ENST00000507232 LRRC7Q96NW7 1537 aa16.59■□□□□ 0.25
SPDL1-206ENST00000507232 MED14O60244 1454 aa16.59■□□□□ 0.25
SPDL1-206ENST00000507232 NUDT16Q96DE0 195 aaKnown RBP16.59■□□□□ 0.25
SPDL1-206ENST00000507232 RSPH6AQ9H0K4 717 aa16.59■□□□□ 0.25
SPDL1-206ENST00000507232 MAP2P11137 1827 aaKnown RBP16.58■□□□□ 0.25
SPDL1-206ENST00000507232 NRXN3Q9Y4C0 1643 aa16.58■□□□□ 0.24
SPDL1-206ENST00000507232 PNPLA6Q8IY17 1366 aa16.58■□□□□ 0.24
SPDL1-206ENST00000507232 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
SPDL1-206ENST00000507232 REREQ9P2R6 1566 aa16.57■□□□□ 0.24
SPDL1-206ENST00000507232 ELL2O00472 640 aaPredicted RBP16.57■□□□□ 0.24
SPDL1-206ENST00000507232 RWDD1Q9H446 243 aaPredicted RBP16.57■□□□□ 0.24
SPDL1-206ENST00000507232 TMEM57Q8N5G2 664 aa16.56■□□□□ 0.24
SPDL1-206ENST00000507232 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
SPDL1-206ENST00000507232 FCHSD2O94868 740 aa16.55■□□□□ 0.24
SPDL1-206ENST00000507232 ATF7IPQ6VMQ6 1270 aa16.55■□□□□ 0.24
SPDL1-206ENST00000507232 USP19O94966 1318 aa16.55■□□□□ 0.24
SPDL1-206ENST00000507232 ATP7BP35670 1465 aa16.55■□□□□ 0.24
SPDL1-206ENST00000507232 SOX12O15370 315 aa16.55■□□□□ 0.24
SPDL1-206ENST00000507232 CEBPAP49715 358 aaPredicted RBP16.55■□□□□ 0.24
SPDL1-206ENST00000507232 CPS1P31327 1500 aa16.54■□□□□ 0.24
SPDL1-206ENST00000507232 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
SPDL1-206ENST00000507232 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.54■□□□□ 0.24
SPDL1-206ENST00000507232 PNNQ9H307 717 aaKnown RBP16.54■□□□□ 0.24
SPDL1-206ENST00000507232 FAM83GA6ND36 823 aa16.53■□□□□ 0.24
SPDL1-206ENST00000507232 TSPYL6Q8N831 410 aa16.53■□□□□ 0.24
SPDL1-206ENST00000507232 COG3Q96JB2 828 aa16.53■□□□□ 0.24
SPDL1-206ENST00000507232 PRR36Q9H6K5 1346 aa16.53■□□□□ 0.24
SPDL1-206ENST00000507232 FAM135BQ49AJ0 1406 aa16.53■□□□□ 0.24
SPDL1-206ENST00000507232 KIF13AQ9H1H9 1805 aa16.53■□□□□ 0.24
SPDL1-206ENST00000507232 IL13P35225 146 aa16.52■□□□□ 0.24
SPDL1-206ENST00000507232 DCTN1Q14203 1278 aa16.52■□□□□ 0.24
SPDL1-206ENST00000507232 CPSF1Q10570 1443 aaKnown RBP16.52■□□□□ 0.23
SPDL1-206ENST00000507232 IL16Q14005 1332 aa16.52■□□□□ 0.23
SPDL1-206ENST00000507232 NFE2L2Q16236 605 aa16.52■□□□□ 0.23
SPDL1-206ENST00000507232 VIRMAQ69YN4 1812 aaKnown RBP16.52■□□□□ 0.23
SPDL1-206ENST00000507232 EDC4Q6P2E9 1401 aaKnown RBP16.51■□□□□ 0.23
SPDL1-206ENST00000507232 TNRQ92752 1358 aa16.51■□□□□ 0.23
SPDL1-206ENST00000507232 CT47B1P0C2W7 299 aaPredicted RBP16.51■□□□□ 0.23
SPDL1-206ENST00000507232 CCDC61Q9Y6R9 512 aa16.51■□□□□ 0.23
SPDL1-206ENST00000507232 SLC26A8Q96RN1 970 aa16.51■□□□□ 0.23
SPDL1-206ENST00000507232 ROBO2Q9HCK4 1378 aa16.5■□□□□ 0.23
SPDL1-206ENST00000507232 NFKBIBQ15653 356 aa16.5■□□□□ 0.23
SPDL1-206ENST00000507232 C1orf115Q9H7X2 142 aa16.49■□□□□ 0.23
SPDL1-206ENST00000507232 DDX19BQ9UMR2 479 aa16.49■□□□□ 0.23
SPDL1-206ENST00000507232 LTKP29376 864 aa16.49■□□□□ 0.23
SPDL1-206ENST00000507232 AAMPQ13685 434 aa16.48■□□□□ 0.23
SPDL1-206ENST00000507232 AEBP1Q8IUX7 1158 aa16.48■□□□□ 0.23
SPDL1-206ENST00000507232 MBIPQ9NS73 344 aa16.48■□□□□ 0.23
SPDL1-206ENST00000507232 CDC42BPGQ6DT37 1551 aa16.47■□□□□ 0.23
SPDL1-206ENST00000507232 TMEM2Q9UHN6 1383 aa16.46■□□□□ 0.23
SPDL1-206ENST00000507232 VAMP4O75379 141 aa16.46■□□□□ 0.23
SPDL1-206ENST00000507232 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms