RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 NUP155O75694 1391 aa14.2□□□□□ -0.14
CLCN3-205ENST00000506924 GCC2Q8IWJ2 1684 aa14.2□□□□□ -0.14
CLCN3-205ENST00000506924 HFM1A2PYH4 1435 aa14.19□□□□□ -0.14
CLCN3-205ENST00000506924 CERKQ8TCT0 537 aa14.19□□□□□ -0.14
CLCN3-205ENST00000506924 BCL2L12Q9HB09 334 aa14.19□□□□□ -0.14
CLCN3-205ENST00000506924 ERVK-7P63135 1459 aa14.18□□□□□ -0.14
CLCN3-205ENST00000506924 ZMYND10O75800 440 aa14.18□□□□□ -0.14
CLCN3-205ENST00000506924 FCHSD2O94868 740 aa14.18□□□□□ -0.14
CLCN3-205ENST00000506924 TRIM52Q96A61 297 aa14.18□□□□□ -0.14
CLCN3-205ENST00000506924 FAM163AQ96GL9 167 aaPredicted RBP14.18□□□□□ -0.14
CLCN3-205ENST00000506924 LMTK2Q8IWU2 1503 aa14.17□□□□□ -0.14
CLCN3-205ENST00000506924 NUTM2FA1L443 756 aa14.17□□□□□ -0.14
CLCN3-205ENST00000506924 GPR37O15354 613 aa14.17□□□□□ -0.14
CLCN3-205ENST00000506924 EMP3P54852 163 aa14.17□□□□□ -0.14
CLCN3-205ENST00000506924 ERBB3P21860 1342 aa14.16□□□□□ -0.14
CLCN3-205ENST00000506924 EFCAB6Q5THR3 1501 aa14.16□□□□□ -0.14
CLCN3-205ENST00000506924 HIC1Q14526 733 aa14.16□□□□□ -0.14
CLCN3-205ENST00000506924 CEP170BQ9Y4F5 1589 aaPredicted RBP14.16□□□□□ -0.14
CLCN3-205ENST00000506924 ARHGAP31Q2M1Z3 1444 aa14.15□□□□□ -0.14
CLCN3-205ENST00000506924 SPATA31D1Q6ZQQ2 1576 aa14.15□□□□□ -0.14
CLCN3-205ENST00000506924 PTGDRQ13258 359 aa14.15□□□□□ -0.14
CLCN3-205ENST00000506924 C6orf132Q5T0Z8 1188 aa14.15□□□□□ -0.14
CLCN3-205ENST00000506924 ADAM33Q9BZ11 813 aa14.15□□□□□ -0.14
CLCN3-205ENST00000506924 IQGAP3Q86VI3 1631 aa14.15□□□□□ -0.14
CLCN3-205ENST00000506924 TET3O43151 1660 aa14.14□□□□□ -0.15
CLCN3-205ENST00000506924 RBM33Q96EV2 1170 aaKnown RBP14.14□□□□□ -0.15
CLCN3-205ENST00000506924 A2ML1A8K2U0 1454 aa14.13□□□□□ -0.15
CLCN3-205ENST00000506924 BARGINQ6ZT62 677 aa14.13□□□□□ -0.15
CLCN3-205ENST00000506924 ZNF142P52746 1687 aaPredicted RBP14.13□□□□□ -0.15
CLCN3-205ENST00000506924 E9PCH4 1651 aa14.12□□□□□ -0.15
CLCN3-205ENST00000506924 LCE2DQ5TA82 110 aaPredicted RBP14.12□□□□□ -0.15
CLCN3-205ENST00000506924 STRCQ7RTU9 1775 aa14.11□□□□□ -0.15
CLCN3-205ENST00000506924 SYNMO15061 1565 aa14.11□□□□□ -0.15
CLCN3-205ENST00000506924 GNPATO15228 680 aa14.11□□□□□ -0.15
CLCN3-205ENST00000506924 PTPREP23469 700 aa14.11□□□□□ -0.15
CLCN3-205ENST00000506924 RBM27Q9P2N5 1060 aaKnown RBP14.11□□□□□ -0.15
CLCN3-205ENST00000506924 NLRP1Q9C000 1473 aa14.11□□□□□ -0.15
CLCN3-205ENST00000506924 SETD5Q9C0A6 1442 aa14.1□□□□□ -0.15
CLCN3-205ENST00000506924 PRKCSHP14314 528 aaPredicted RBP14.1□□□□□ -0.15
CLCN3-205ENST00000506924 IDI1Q13907 227 aa14.1□□□□□ -0.15
CLCN3-205ENST00000506924 TSR1Q2NL82 804 aaKnown RBP14.1□□□□□ -0.15
CLCN3-205ENST00000506924 VARS2Q5ST30 1063 aaKnown RBP14.1□□□□□ -0.15
CLCN3-205ENST00000506924 NPDC1Q9NQX5 325 aaPredicted RBP14.1□□□□□ -0.15
CLCN3-205ENST00000506924 UGGT1Q9NYU2 1555 aa14.09□□□□□ -0.15
CLCN3-205ENST00000506924 NOS1P29475 1434 aa14.09□□□□□ -0.15
CLCN3-205ENST00000506924 PBX2P40425 430 aa14.09□□□□□ -0.15
CLCN3-205ENST00000506924 MARVELD3Q96A59 401 aa14.09□□□□□ -0.15
CLCN3-205ENST00000506924 THEMISQ8N1K5 641 aaPredicted RBP14.08□□□□□ -0.16
CLCN3-205ENST00000506924 CDHR5Q9HBB8 845 aa14.08□□□□□ -0.16
CLCN3-205ENST00000506924 PIK3C2BO00750 1634 aa14.08□□□□□ -0.16
CLCN3-205ENST00000506924 RAB3GAP2Q9H2M9 1393 aa14.08□□□□□ -0.16
CLCN3-205ENST00000506924 RPRD2Q5VT52 1461 aaKnown RBP14.07□□□□□ -0.16
CLCN3-205ENST00000506924 PPP1R3GB7ZBB8 358 aa14.07□□□□□ -0.16
CLCN3-205ENST00000506924 ZNF687Q8N1G0 1237 aa14.07□□□□□ -0.16
CLCN3-205ENST00000506924 UBR1Q8IWV7 1749 aa14.06□□□□□ -0.16
CLCN3-205ENST00000506924 FAM205CA6NFA0 338 aa14.05□□□□□ -0.16
CLCN3-205ENST00000506924 MAP2K5Q13163 448 aa14.04□□□□□ -0.16
CLCN3-205ENST00000506924 SLC52A1Q9NWF4 448 aa14.04□□□□□ -0.16
CLCN3-205ENST00000506924 MINK1Q8N4C8 1332 aaPredicted RBP14.04□□□□□ -0.16
CLCN3-205ENST00000506924 PLA2R1Q13018 1463 aa14.04□□□□□ -0.16
CLCN3-205ENST00000506924 ANKLE2Q86XL3 938 aa14.03□□□□□ -0.16
CLCN3-205ENST00000506924 HS3ST6Q96QI5 342 aa14.03□□□□□ -0.16
CLCN3-205ENST00000506924 MPHOSPH9Q99550 1183 aa14.03□□□□□ -0.16
CLCN3-205ENST00000506924 SPHKAPQ2M3C7 1700 aa14.02□□□□□ -0.16
CLCN3-205ENST00000506924 ARHGAP33O14559 1287 aa14.02□□□□□ -0.17
CLCN3-205ENST00000506924 MYO5BQ9ULV0 1848 aa14.01□□□□□ -0.17
CLCN3-205ENST00000506924 ONECUT3O60422 494 aaPredicted RBP14.01□□□□□ -0.17
CLCN3-205ENST00000506924 LTKP29376 864 aa14.01□□□□□ -0.17
CLCN3-205ENST00000506924 TXNDC2Q86VQ3 553 aa14.01□□□□□ -0.17
CLCN3-205ENST00000506924 POLR1AO95602 1720 aaPredicted RBP14.01□□□□□ -0.17
CLCN3-205ENST00000506924 ADGRB3O60242 1522 aa14□□□□□ -0.17
CLCN3-205ENST00000506924 NUTM2DQ5VT03 806 aaPredicted RBP14□□□□□ -0.17
CLCN3-205ENST00000506924 TTC13Q8NBP0 860 aa14□□□□□ -0.17
CLCN3-205ENST00000506924 NEURL4Q96JN8 1562 aa14□□□□□ -0.17
CLCN3-205ENST00000506924 PTPRTO14522 1441 aa13.99□□□□□ -0.17
CLCN3-205ENST00000506924 PRSS12P56730 875 aa13.99□□□□□ -0.17
CLCN3-205ENST00000506924 SLC4A5Q9BY07 1137 aa13.99□□□□□ -0.17
CLCN3-205ENST00000506924 TMEM2Q9UHN6 1383 aa13.98□□□□□ -0.17
CLCN3-205ENST00000506924 TMEM131LA2VDJ0 1609 aa13.98□□□□□ -0.17
CLCN3-205ENST00000506924 KRI1Q8N9T8 703 aaKnown RBP13.98□□□□□ -0.17
CLCN3-205ENST00000506924 KCNK17Q96T54 332 aa13.98□□□□□ -0.17
CLCN3-205ENST00000506924 EID1Q9Y6B2 187 aa13.98□□□□□ -0.17
CLCN3-205ENST00000506924 CLTCL1P53675 1640 aa13.97□□□□□ -0.17
CLCN3-205ENST00000506924 COL9A1P20849 921 aa13.97□□□□□ -0.17
CLCN3-205ENST00000506924 TRIM26Q12899 539 aaPredicted RBP13.97□□□□□ -0.17
CLCN3-205ENST00000506924 AK7Q96M32 723 aa13.97□□□□□ -0.17
CLCN3-205ENST00000506924 NPHP4O75161 1426 aaPredicted RBP13.97□□□□□ -0.17
CLCN3-205ENST00000506924 SLIT1O75093 1534 aa13.96□□□□□ -0.17
CLCN3-205ENST00000506924 TRPM2O94759 1503 aa13.96□□□□□ -0.17
CLCN3-205ENST00000506924 SCAF11Q99590 1463 aaKnown RBP13.96□□□□□ -0.17
CLCN3-205ENST00000506924 ARHGAP23Q9P227 1491 aa13.96□□□□□ -0.17
CLCN3-205ENST00000506924 IRF6O14896 467 aa13.96□□□□□ -0.17
CLCN3-205ENST00000506924 ZNF326Q5BKZ1 582 aaKnown RBP13.96□□□□□ -0.17
CLCN3-205ENST00000506924 CDCA7LQ96GN5 454 aa13.96□□□□□ -0.17
CLCN3-205ENST00000506924 ZNF335Q9H4Z2 1342 aaPredicted RBP13.95□□□□□ -0.18
CLCN3-205ENST00000506924 KDM5AP29375 1690 aaKnown RBP13.95□□□□□ -0.18
CLCN3-205ENST00000506924 SLC24A3Q9HC58 644 aa13.95□□□□□ -0.18
CLCN3-205ENST00000506924 POTEB3A0JP26 581 aa13.94□□□□□ -0.18
CLCN3-205ENST00000506924 POTEMA6NI47 508 aa13.94□□□□□ -0.18
CLCN3-205ENST00000506924 PPP1R15AO75807 674 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms