RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 SLC52A1Q9NWF4 448 aa11.93□□□□□ -0.5
PHF3-208ENST00000506783 SSFA2P28290 1259 aa11.93□□□□□ -0.5
PHF3-208ENST00000506783 CHD1LQ86WJ1 897 aa11.93□□□□□ -0.5
PHF3-208ENST00000506783 CHMP5Q9NZZ3 219 aa11.93□□□□□ -0.5
PHF3-208ENST00000506783 YEATS2Q9ULM3 1422 aa11.92□□□□□ -0.5
PHF3-208ENST00000506783 XRCC6P12956 609 aaKnown RBP eCLIP11.92□□□□□ -0.57e-13■■■■■ 31.2
PHF3-208ENST00000506783 TBC1D32Q96NH3 1257 aa11.92□□□□□ -0.5
PHF3-208ENST00000506783 RRAGDQ9NQL2 400 aaPredicted RBP11.92□□□□□ -0.5
PHF3-208ENST00000506783 SCAF11Q99590 1463 aaKnown RBP11.92□□□□□ -0.5
PHF3-208ENST00000506783 FOXO3O43524 673 aa11.92□□□□□ -0.5
PHF3-208ENST00000506783 PTMAP06454 111 aaKnown RBP11.92□□□□□ -0.5
PHF3-208ENST00000506783 OS9Q13438 667 aaPredicted RBP11.92□□□□□ -0.5
PHF3-208ENST00000506783 CAVIN1Q6NZI2 390 aaKnown RBP11.92□□□□□ -0.5
PHF3-208ENST00000506783 USHBP1Q8N6Y0 703 aa11.91□□□□□ -0.5
PHF3-208ENST00000506783 COG3Q96JB2 828 aa11.91□□□□□ -0.5
PHF3-208ENST00000506783 GDPD2Q9HCC8 539 aa11.91□□□□□ -0.5
PHF3-208ENST00000506783 IL1RAPL2Q9NP60 686 aa11.91□□□□□ -0.5
PHF3-208ENST00000506783 USP19O94966 1318 aa11.91□□□□□ -0.5
PHF3-208ENST00000506783 ZNF521Q96K83 1311 aa11.91□□□□□ -0.5
PHF3-208ENST00000506783 TTC37Q6PGP7 1564 aa11.91□□□□□ -0.5
PHF3-208ENST00000506783 GOLGA6L22H0YM25 854 aa11.91□□□□□ -0.5
PHF3-208ENST00000506783 CD2BP2O95400 341 aaKnown RBP11.91□□□□□ -0.5
PHF3-208ENST00000506783 SLC4A2P04920 1241 aa11.91□□□□□ -0.5
PHF3-208ENST00000506783 DNTTIP2Q5QJE6 756 aaKnown RBP11.91□□□□□ -0.5
PHF3-208ENST00000506783 RTF1Q92541 710 aaKnown RBP11.91□□□□□ -0.5
PHF3-208ENST00000506783 ARHGEF12Q9NZN5 1544 aa11.91□□□□□ -0.5
PHF3-208ENST00000506783 ANXA1P04083 346 aa11.91□□□□□ -0.5
PHF3-208ENST00000506783 XPCQ01831 940 aaPredicted RBP11.9□□□□□ -0.5
PHF3-208ENST00000506783 TRIM35Q9UPQ4 493 aa11.9□□□□□ -0.5
PHF3-208ENST00000506783 AMPHP49418 695 aa11.9□□□□□ -0.5
PHF3-208ENST00000506783 WDR63Q8IWG1 891 aa11.9□□□□□ -0.5
PHF3-208ENST00000506783 UPF3BQ9BZI7 483 aaKnown RBP11.9□□□□□ -0.5
PHF3-208ENST00000506783 L1TD1Q5T7N2 865 aaKnown RBP11.9□□□□□ -0.5
PHF3-208ENST00000506783 RBM10P98175 930 aaKnown RBP11.89□□□□□ -0.51
PHF3-208ENST00000506783 DNAJC5Q9H3Z4 198 aa11.89□□□□□ -0.51
PHF3-208ENST00000506783 C14orf93Q9H972 538 aaKnown RBP11.89□□□□□ -0.51
PHF3-208ENST00000506783 ZNF518AQ6AHZ1 1483 aa11.89□□□□□ -0.51
PHF3-208ENST00000506783 PRPF40AO75400 957 aaKnown RBP11.89□□□□□ -0.51
PHF3-208ENST00000506783 HSPA2P54652 639 aa11.89□□□□□ -0.51
PHF3-208ENST00000506783 FKBP5Q13451 457 aaPredicted RBP11.89□□□□□ -0.51
PHF3-208ENST00000506783 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.89□□□□□ -0.51
PHF3-208ENST00000506783 TNPO1Q92973 898 aaKnown RBP11.89□□□□□ -0.51
PHF3-208ENST00000506783 ANO2Q9NQ90 1003 aa11.89□□□□□ -0.51
PHF3-208ENST00000506783 PPFIA3O75145 1194 aa11.89□□□□□ -0.51
PHF3-208ENST00000506783 MBIPQ9NS73 344 aa11.88□□□□□ -0.51
PHF3-208ENST00000506783 NAP1L2Q9ULW6 460 aaPredicted RBP11.88□□□□□ -0.51
PHF3-208ENST00000506783 HSP90AB2PQ58FF8 381 aa11.88□□□□□ -0.51
PHF3-208ENST00000506783 TBC1D9Q6ZT07 1266 aa11.88□□□□□ -0.51
PHF3-208ENST00000506783 RBM27Q9P2N5 1060 aaKnown RBP11.88□□□□□ -0.51
PHF3-208ENST00000506783 ZCCHC11Q5TAX3 1644 aaKnown RBP11.88□□□□□ -0.51
PHF3-208ENST00000506783 ASXL1Q8IXJ9 1541 aa11.87□□□□□ -0.51
PHF3-208ENST00000506783 VSIG10Q8N0Z9 540 aa11.87□□□□□ -0.51
PHF3-208ENST00000506783 GBP4Q96PP9 640 aa11.87□□□□□ -0.51
PHF3-208ENST00000506783 ZNF330Q9Y3S2 320 aaPredicted RBP11.87□□□□□ -0.51
PHF3-208ENST00000506783 ADGRL2O95490 1459 aa11.87□□□□□ -0.51
PHF3-208ENST00000506783 PKP1Q13835 747 aa11.87□□□□□ -0.51
PHF3-208ENST00000506783 CCDC27Q2M243 656 aa11.87□□□□□ -0.51
PHF3-208ENST00000506783 THEMISQ8N1K5 641 aaPredicted RBP11.87□□□□□ -0.51
PHF3-208ENST00000506783 BLMP54132 1417 aaPredicted RBP11.86□□□□□ -0.51
PHF3-208ENST00000506783 NEK4P51957 841 aa11.86□□□□□ -0.51
PHF3-208ENST00000506783 FOSBP53539 338 aa11.86□□□□□ -0.51
PHF3-208ENST00000506783 CALD1Q05682 793 aaKnown RBP11.86□□□□□ -0.51
PHF3-208ENST00000506783 TSPYL4Q9UJ04 414 aa11.86□□□□□ -0.51
PHF3-208ENST00000506783 POLKQ9UBT6 870 aa11.86□□□□□ -0.51
PHF3-208ENST00000506783 ITSN2Q9NZM3 1697 aa11.85□□□□□ -0.51
PHF3-208ENST00000506783 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
PHF3-208ENST00000506783 MEIS3Q99687 375 aa11.85□□□□□ -0.51
PHF3-208ENST00000506783 KCNJ4P48050 445 aa11.85□□□□□ -0.51
PHF3-208ENST00000506783 CLASP1Q7Z460 1538 aa11.85□□□□□ -0.51
PHF3-208ENST00000506783 ZGPATQ8N5A5 531 aaKnown RBP11.85□□□□□ -0.51
PHF3-208ENST00000506783 SAMD9LQ8IVG5 1584 aa11.85□□□□□ -0.51
PHF3-208ENST00000506783 ZMYM4Q5VZL5 1548 aa11.84□□□□□ -0.51
PHF3-208ENST00000506783 AIMP1Q12904 312 aaKnown RBP11.84□□□□□ -0.51
PHF3-208ENST00000506783 TRMT2AQ8IZ69 625 aaKnown RBP11.84□□□□□ -0.51
PHF3-208ENST00000506783 A0A1W2PP64 1363 aa11.84□□□□□ -0.51
PHF3-208ENST00000506783 KIF16BQ96L93 1317 aa11.84□□□□□ -0.51
PHF3-208ENST00000506783 GRPEL1Q9HAV7 217 aa11.84□□□□□ -0.51
PHF3-208ENST00000506783 CASC1Q6TDU7 716 aa11.83□□□□□ -0.52
PHF3-208ENST00000506783 NUTM1Q86Y26 1132 aa11.83□□□□□ -0.52
PHF3-208ENST00000506783 JARID2Q92833 1246 aaPredicted RBP11.83□□□□□ -0.52
PHF3-208ENST00000506783 UHRF1BP1LA0JNW5 1464 aa11.83□□□□□ -0.52
PHF3-208ENST00000506783 KDM5DQ9BY66 1539 aa11.83□□□□□ -0.52
PHF3-208ENST00000506783 FAM13BQ9NYF5 915 aa11.83□□□□□ -0.52
PHF3-208ENST00000506783 ADCY10Q96PN6 1610 aa11.83□□□□□ -0.52
PHF3-208ENST00000506783 MSNP26038 577 aaKnown RBP11.82□□□□□ -0.52
PHF3-208ENST00000506783 FBXW7Q969H0 707 aa11.82□□□□□ -0.52
PHF3-208ENST00000506783 ZBTB40Q9NUA8 1239 aa11.82□□□□□ -0.52
PHF3-208ENST00000506783 GNAI1P63096 354 aa11.82□□□□□ -0.52
PHF3-208ENST00000506783 G2E3Q7L622 706 aa11.82□□□□□ -0.52
PHF3-208ENST00000506783 GAS2L3Q86XJ1 694 aa11.82□□□□□ -0.52
PHF3-208ENST00000506783 NUDT16Q96DE0 195 aaKnown RBP11.82□□□□□ -0.52
PHF3-208ENST00000506783 KDM4AO75164 1064 aa11.82□□□□□ -0.52
PHF3-208ENST00000506783 NLRP6P59044 892 aa11.82□□□□□ -0.52
PHF3-208ENST00000506783 STK31Q9BXU1 1019 aa11.82□□□□□ -0.52
PHF3-208ENST00000506783 PROSER2Q86WR7 435 aaPredicted RBP11.81□□□□□ -0.52
PHF3-208ENST00000506783 ANKLE2Q86XL3 938 aa11.81□□□□□ -0.52
PHF3-208ENST00000506783 VAMP4O75379 141 aa11.81□□□□□ -0.52
PHF3-208ENST00000506783 CDC42BPAQ5VT25 1732 aa11.81□□□□□ -0.52
PHF3-208ENST00000506783 ZMYM3Q14202 1370 aa11.81□□□□□ -0.52
PHF3-208ENST00000506783 NFE2L2Q16236 605 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms