RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 NDUFV2P19404 249 aa8.17□□□□□ -1.1
SMAD1-205ENST00000506626 PURBQ96QR8 312 aaKnown RBP8.16□□□□□ -1.1
SMAD1-205ENST00000506626 MS4A1P11836 297 aa8.15□□□□□ -1.1
SMAD1-205ENST00000506626 TIMP2P16035 220 aa8.15□□□□□ -1.1
SMAD1-205ENST00000506626 PARP9Q8IXQ6 854 aa8.15□□□□□ -1.1
SMAD1-205ENST00000506626 BEGAINQ9BUH8 593 aa8.15□□□□□ -1.1
SMAD1-205ENST00000506626 CCNYL3P0C7X3 344 aa8.14□□□□□ -1.11
SMAD1-205ENST00000506626 NNTQ13423 1086 aa8.14□□□□□ -1.11
SMAD1-205ENST00000506626 PTPRNQ16849 979 aa8.14□□□□□ -1.11
SMAD1-205ENST00000506626 MPNDQ8N594 471 aa8.14□□□□□ -1.11
SMAD1-205ENST00000506626 TRIM66O15016 1216 aa8.13□□□□□ -1.11
SMAD1-205ENST00000506626 RASSF7Q02833 373 aa8.13□□□□□ -1.11
SMAD1-205ENST00000506626 TMEM151AQ8N4L1 468 aa8.13□□□□□ -1.11
SMAD1-205ENST00000506626 KLF16Q9BXK1 252 aaPredicted RBP8.13□□□□□ -1.11
SMAD1-205ENST00000506626 MTMR2Q13614 643 aa8.12□□□□□ -1.11
SMAD1-205ENST00000506626 SCARF1Q14162 830 aa8.12□□□□□ -1.11
SMAD1-205ENST00000506626 PRR7Q8TB68 274 aa8.12□□□□□ -1.11
SMAD1-205ENST00000506626 TBC1D2Q9BYX2 928 aa8.12□□□□□ -1.11
SMAD1-205ENST00000506626 SPDYE5A6NIY4 337 aa8.11□□□□□ -1.11
SMAD1-205ENST00000506626 GDF11O95390 407 aa8.11□□□□□ -1.11
SMAD1-205ENST00000506626 ADH1CP00326 375 aa8.11□□□□□ -1.11
SMAD1-205ENST00000506626 GJA5P36382 358 aa8.11□□□□□ -1.11
SMAD1-205ENST00000506626 DIXDC1Q155Q3 683 aa8.11□□□□□ -1.11
SMAD1-205ENST00000506626 DESI1Q6ICB0 168 aa8.11□□□□□ -1.11
SMAD1-205ENST00000506626 AK7Q96M32 723 aa8.11□□□□□ -1.11
SMAD1-205ENST00000506626 UNC93B1Q9H1C4 597 aa8.11□□□□□ -1.11
SMAD1-205ENST00000506626 RSBN1LQ6PCB5 846 aaPredicted RBP8.1□□□□□ -1.11
SMAD1-205ENST00000506626 EVA1BQ9NVM1 165 aa8.1□□□□□ -1.11
SMAD1-205ENST00000506626 PLEKHG3A1L390 1219 aa8.09□□□□□ -1.11
SMAD1-205ENST00000506626 PPFIA3O75145 1194 aa8.09□□□□□ -1.11
SMAD1-205ENST00000506626 WDR4P57081 412 aaKnown RBP8.09□□□□□ -1.11
SMAD1-205ENST00000506626 KRT76Q01546 638 aa8.09□□□□□ -1.11
SMAD1-205ENST00000506626 KCNH2Q12809 1159 aa8.09□□□□□ -1.11
SMAD1-205ENST00000506626 VARSP26640 1264 aaKnown RBP8.08□□□□□ -1.12
SMAD1-205ENST00000506626 LINC01559Q495D7 138 aa8.08□□□□□ -1.12
SMAD1-205ENST00000506626 ZNF511Q8NB15 262 aa8.08□□□□□ -1.12
SMAD1-205ENST00000506626 RNF225M0QZC1 329 aaPredicted RBP8.07□□□□□ -1.12
SMAD1-205ENST00000506626 SPTLC1O15269 473 aa8.07□□□□□ -1.12
SMAD1-205ENST00000506626 BAP1Q92560 729 aa8.07□□□□□ -1.12
SMAD1-205ENST00000506626 PCDHB15Q9Y5E8 787 aa8.07□□□□□ -1.12
SMAD1-205ENST00000506626 ADAMTS8Q9UP79 889 aa8.06□□□□□ -1.12
SMAD1-205ENST00000506626 CFAP99D6REC4 459 aa8.05□□□□□ -1.12
SMAD1-205ENST00000506626 MAN1A2O60476 641 aa8.05□□□□□ -1.12
SMAD1-205ENST00000506626 HRCP23327 699 aa8.05□□□□□ -1.12
SMAD1-205ENST00000506626 LYPD8Q6UX82 237 aa8.05□□□□□ -1.12
SMAD1-205ENST00000506626 RIC3Q7Z5B4 369 aa8.05□□□□□ -1.12
SMAD1-205ENST00000506626 ZBTB3Q9H5J0 574 aa8.05□□□□□ -1.12
SMAD1-205ENST00000506626 PDE4DQ08499 809 aa8.04□□□□□ -1.12
SMAD1-205ENST00000506626 PRPF38BQ5VTL8 546 aaKnown RBP8.04□□□□□ -1.12
SMAD1-205ENST00000506626 ZFAND3Q9H8U3 227 aa8.04□□□□□ -1.12
SMAD1-205ENST00000506626 GPR161Q8N6U8 529 aaKnown RBP8.03□□□□□ -1.12
SMAD1-205ENST00000506626 CDK15Q96Q40 435 aa8.03□□□□□ -1.12
SMAD1-205ENST00000506626 CTHP32929 405 aa8.02□□□□□ -1.13
SMAD1-205ENST00000506626 CABLES1Q8TDN4 633 aa8.02□□□□□ -1.13
SMAD1-205ENST00000506626 ITPKCQ96DU7 683 aa8.02□□□□□ -1.13
SMAD1-205ENST00000506626 DNMT3AQ9Y6K1 912 aaPredicted RBP8.02□□□□□ -1.13
SMAD1-205ENST00000506626 ZIC2O95409 532 aaPredicted RBP8.01□□□□□ -1.13
SMAD1-205ENST00000506626 F12P00748 615 aaPredicted RBP8.01□□□□□ -1.13
SMAD1-205ENST00000506626 CSPP1Q1MSJ5 1256 aa8.01□□□□□ -1.13
SMAD1-205ENST00000506626 C6orf118Q5T5N4 469 aa8.01□□□□□ -1.13
SMAD1-205ENST00000506626 MYSM1Q5VVJ2 828 aa8.01□□□□□ -1.13
SMAD1-205ENST00000506626 CNTNAP3BQ96NU0 1288 aa8.01□□□□□ -1.13
SMAD1-205ENST00000506626 CNTNAP3Q9BZ76 1288 aa8.01□□□□□ -1.13
SMAD1-205ENST00000506626 SLC24A3Q9HC58 644 aa8.01□□□□□ -1.13
SMAD1-205ENST00000506626 MAP10Q9P2G4 905 aa8.01□□□□□ -1.13
SMAD1-205ENST00000506626 LIMD1Q9UGP4 676 aa8.01□□□□□ -1.13
SMAD1-205ENST00000506626 DNMT3LQ9UJW3 386 aa8.01□□□□□ -1.13
SMAD1-205ENST00000506626 SOS2Q07890 1332 aaPredicted RBP8.01□□□□□ -1.13
SMAD1-205ENST00000506626 NR3C2P08235 984 aa8□□□□□ -1.13
SMAD1-205ENST00000506626 ZNF385CQ66K41 422 aaPredicted RBP8□□□□□ -1.13
SMAD1-205ENST00000506626 IGHA1P01876 353 aa7.99□□□□□ -1.13
SMAD1-205ENST00000506626 TUSC1Q2TAM9 212 aa7.99□□□□□ -1.13
SMAD1-205ENST00000506626 GPAT2Q6NUI2 795 aa7.99□□□□□ -1.13
SMAD1-205ENST00000506626 LINC00528Q8N1L1 170 aa7.99□□□□□ -1.13
SMAD1-205ENST00000506626 MEIOBQ8N635 442 aa7.99□□□□□ -1.13
SMAD1-205ENST00000506626 FAM174AQ8TBP5 190 aa7.99□□□□□ -1.13
SMAD1-205ENST00000506626 QPCTQ16769 361 aa7.98□□□□□ -1.13
SMAD1-205ENST00000506626 XP32Q5T750 250 aa7.98□□□□□ -1.13
SMAD1-205ENST00000506626 PER1O15534 1290 aaPredicted RBP7.97□□□□□ -1.13
SMAD1-205ENST00000506626 TSC1Q92574 1164 aa7.97□□□□□ -1.13
SMAD1-205ENST00000506626 FOXJ1Q92949 421 aa7.97□□□□□ -1.13
SMAD1-205ENST00000506626 NUTM2BA6NNL0 878 aaPredicted RBP7.96□□□□□ -1.14
SMAD1-205ENST00000506626 NUTM2EB1AL46 878 aaPredicted RBP7.96□□□□□ -1.14
SMAD1-205ENST00000506626 LILRB3O75022 631 aa7.96□□□□□ -1.14
SMAD1-205ENST00000506626 BMP2P12643 396 aa7.96□□□□□ -1.14
SMAD1-205ENST00000506626 NR5A1Q13285 461 aa7.96□□□□□ -1.14
SMAD1-205ENST00000506626 RNFT1Q5M7Z0 435 aa7.96□□□□□ -1.14
SMAD1-205ENST00000506626 NUTM2DQ5VT03 806 aaPredicted RBP7.96□□□□□ -1.14
SMAD1-205ENST00000506626 NUTM2AQ8IVF1 878 aaPredicted RBP7.96□□□□□ -1.14
SMAD1-205ENST00000506626 COL25A1Q9BXS0 654 aaPredicted RBP7.96□□□□□ -1.14
SMAD1-205ENST00000506626 ARHGEF15O94989 841 aa7.95□□□□□ -1.14
SMAD1-205ENST00000506626 GRM5P41594 1212 aa7.95□□□□□ -1.14
SMAD1-205ENST00000506626 NANOS1Q8WY41 292 aaKnown RBP7.95□□□□□ -1.14
SMAD1-205ENST00000506626 SLURP2P0DP57 97 aa7.94□□□□□ -1.14
SMAD1-205ENST00000506626 IRS1P35568 1242 aa7.94□□□□□ -1.14
SMAD1-205ENST00000506626 CLK2P49760 499 aaKnown RBP7.94□□□□□ -1.14
SMAD1-205ENST00000506626 FOXK2Q01167 660 aa7.94□□□□□ -1.14
SMAD1-205ENST00000506626 SVOPQ8N4V2 548 aa7.94□□□□□ -1.14
SMAD1-205ENST00000506626 WHAMMQ8TF30 809 aa7.94□□□□□ -1.14
SMAD1-205ENST00000506626 UPP2O95045 317 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms