RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 KRT28Q7Z3Y7 464 aa27.8■■■□□ 2.04
SMIM20-201ENST00000506197 CCDC61Q9Y6R9 512 aa27.8■■■□□ 2.04
SMIM20-201ENST00000506197 TNS3Q68CZ2 1445 aa27.8■■■□□ 2.04
SMIM20-201ENST00000506197 PPIP5K1Q6PFW1 1433 aa27.79■■■□□ 2.04
SMIM20-201ENST00000506197 RBM6P78332 1123 aaKnown RBP27.79■■■□□ 2.04
SMIM20-201ENST00000506197 TMC1Q8TDI8 760 aa27.79■■■□□ 2.04
SMIM20-201ENST00000506197 RGS12O14924 1447 aa27.78■■■□□ 2.04
SMIM20-201ENST00000506197 NINLQ9Y2I6 1382 aa27.78■■■□□ 2.04
SMIM20-201ENST00000506197 USP21Q9UK80 565 aa27.78■■■□□ 2.04
SMIM20-201ENST00000506197 FNBP4Q8N3X1 1017 aaPredicted RBP27.77■■■□□ 2.04
SMIM20-201ENST00000506197 PSME1Q06323 249 aa27.76■■■□□ 2.03
SMIM20-201ENST00000506197 SBNO1A3KN83 1393 aa27.74■■■□□ 2.03
SMIM20-201ENST00000506197 CABP1Q9NZU7 370 aa27.74■■■□□ 2.03
SMIM20-201ENST00000506197 TRPC5Q9UL62 973 aaPredicted RBP27.74■■■□□ 2.03
SMIM20-201ENST00000506197 ABCA3Q99758 1704 aa27.74■■■□□ 2.03
SMIM20-201ENST00000506197 PMFBP1Q8TBY8 1022 aa27.73■■■□□ 2.03
SMIM20-201ENST00000506197 ATRNO75882 1429 aa27.73■■■□□ 2.03
SMIM20-201ENST00000506197 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.72■■■□□ 2.03
SMIM20-201ENST00000506197 AKAP12Q02952 1782 aa27.72■■■□□ 2.03
SMIM20-201ENST00000506197 TRPM3Q9HCF6 1732 aaPredicted RBP27.72■■■□□ 2.03
SMIM20-201ENST00000506197 SLC12A5Q9H2X9 1139 aa27.71■■■□□ 2.03
SMIM20-201ENST00000506197 ARHGEF10O15013 1369 aa27.7■■■□□ 2.02
SMIM20-201ENST00000506197 BCL9LQ86UU0 1499 aa27.7■■■□□ 2.02
SMIM20-201ENST00000506197 PLEKHG3A1L390 1219 aa27.69■■■□□ 2.02
SMIM20-201ENST00000506197 TERF2IPQ9NYB0 399 aa27.69■■■□□ 2.02
SMIM20-201ENST00000506197 HDGFL2Q7Z4V5 671 aaPredicted RBP27.68■■■□□ 2.02
SMIM20-201ENST00000506197 NGDNQ8NEJ9 315 aaKnown RBP27.68■■■□□ 2.02
SMIM20-201ENST00000506197 UPF1Q92900 1129 aaKnown RBP eCLIP27.68■■■□□ 2.02
SMIM20-201ENST00000506197 MON2Q7Z3U7 1717 aa27.67■■■□□ 2.02
SMIM20-201ENST00000506197 ALS2Q96Q42 1657 aa27.66■■■□□ 2.02
SMIM20-201ENST00000506197 ANKRD36BQ8N2N9 1353 aa27.66■■■□□ 2.02
SMIM20-201ENST00000506197 HAP1P54257 671 aaPredicted RBP27.66■■■□□ 2.02
SMIM20-201ENST00000506197 LMOD2Q6P5Q4 547 aa27.66■■■□□ 2.02
SMIM20-201ENST00000506197 ACEP12821 1306 aa27.66■■■□□ 2.02
SMIM20-201ENST00000506197 SLIT2O94813 1529 aa27.65■■■□□ 2.02
SMIM20-201ENST00000506197 PLCH1Q4KWH8 1693 aa27.65■■■□□ 2.02
SMIM20-201ENST00000506197 POLR3AO14802 1390 aaPredicted RBP27.64■■■□□ 2.02
SMIM20-201ENST00000506197 CD163L1Q9NR16 1453 aa27.64■■■□□ 2.01
SMIM20-201ENST00000506197 A0A1W2PP64 1363 aa27.63■■■□□ 2.01
SMIM20-201ENST00000506197 PLEKHG5O94827 1062 aa27.63■■■□□ 2.01
SMIM20-201ENST00000506197 DDX10Q13206 875 aaKnown RBP27.63■■■□□ 2.01
SMIM20-201ENST00000506197 CABLES1Q8TDN4 633 aa27.63■■■□□ 2.01
SMIM20-201ENST00000506197 CPSF1Q10570 1443 aaKnown RBP27.62■■■□□ 2.01
SMIM20-201ENST00000506197 ZNF692Q9BU19 519 aaPredicted RBP27.62■■■□□ 2.01
SMIM20-201ENST00000506197 PANK3Q9H999 370 aa27.62■■■□□ 2.01
SMIM20-201ENST00000506197 KTN1Q86UP2 1357 aaKnown RBP27.61■■■□□ 2.01
SMIM20-201ENST00000506197 NWD2Q9ULI1 1742 aa27.61■■■□□ 2.01
SMIM20-201ENST00000506197 UNC5CLQ8IV45 518 aa27.59■■■□□ 2.01
SMIM20-201ENST00000506197 EP400Q96L91 3159 aa27.58■■■□□ 2.01
SMIM20-201ENST00000506197 USP6P35125 1406 aa27.58■■■□□ 2
SMIM20-201ENST00000506197 CRYBG1Q9Y4K1 1723 aa27.57■■■□□ 2
SMIM20-201ENST00000506197 GLI3P10071 1580 aa27.56■■■□□ 2
SMIM20-201ENST00000506197 NRKQ7Z2Y5 1582 aa27.56■■■□□ 2
SMIM20-201ENST00000506197 GJD4Q96KN9 370 aaPredicted RBP27.56■■■□□ 2
SMIM20-201ENST00000506197 EDC4Q6P2E9 1401 aaKnown RBP27.55■■■□□ 2
SMIM20-201ENST00000506197 NSD3Q9BZ95 1437 aa27.55■■■□□ 2
SMIM20-201ENST00000506197 KIF20BQ96Q89 1820 aa27.53■■■□□ 2
SMIM20-201ENST00000506197 BRD4O60885 1362 aaPredicted RBP27.53■■■□□ 2
SMIM20-201ENST00000506197 PAK3O75914 559 aaPredicted RBP27.52■■■□□ 2
SMIM20-201ENST00000506197 KNSTRNQ9Y448 316 aa27.52■■■□□ 2
SMIM20-201ENST00000506197 NRAPQ86VF7 1730 aa27.51■■□□□ 1.99
SMIM20-201ENST00000506197 CARD14Q9BXL6 1004 aa27.51■■□□□ 1.99
SMIM20-201ENST00000506197 COL14A1Q05707 1796 aaKnown RBP27.5■■□□□ 1.99
SMIM20-201ENST00000506197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.48■■□□□ 1.99
SMIM20-201ENST00000506197 PHRF1Q9P1Y6 1649 aaKnown RBP27.48■■□□□ 1.99
SMIM20-201ENST00000506197 TTC21BQ7Z4L5 1316 aa27.47■■□□□ 1.99
SMIM20-201ENST00000506197 TTC21AQ8NDW8 1320 aa27.47■■□□□ 1.99
SMIM20-201ENST00000506197 FAM83GA6ND36 823 aa27.47■■□□□ 1.99
SMIM20-201ENST00000506197 SSH2Q76I76 1423 aa27.47■■□□□ 1.99
SMIM20-201ENST00000506197 BRWD3Q6RI45 1802 aa27.46■■□□□ 1.99
SMIM20-201ENST00000506197 CGNL1Q0VF96 1302 aa27.46■■□□□ 1.99
SMIM20-201ENST00000506197 VPS72Q15906 364 aa27.46■■□□□ 1.99
SMIM20-201ENST00000506197 PIK3C2AO00443 1686 aa27.44■■□□□ 1.98
SMIM20-201ENST00000506197 PER1O15534 1290 aaPredicted RBP27.44■■□□□ 1.98
SMIM20-201ENST00000506197 ANKRD26Q9UPS8 1709 aa27.44■■□□□ 1.98
SMIM20-201ENST00000506197 CCDC9Q9Y3X0 531 aaKnown RBP27.43■■□□□ 1.98
SMIM20-201ENST00000506197 ABTB2Q8N961 1025 aa27.4■■□□□ 1.98
SMIM20-201ENST00000506197 BTG4Q9NY30 223 aa27.4■■□□□ 1.98
SMIM20-201ENST00000506197 NSD2O96028 1365 aa27.39■■□□□ 1.98
SMIM20-201ENST00000506197 NME9Q86XW9 330 aa27.39■■□□□ 1.98
SMIM20-201ENST00000506197 PRDM11Q9NQV5 511 aa27.38■■□□□ 1.97
SMIM20-201ENST00000506197 USP54Q70EL1 1684 aa27.37■■□□□ 1.97
SMIM20-201ENST00000506197 AMER1Q5JTC6 1135 aaPredicted RBP27.37■■□□□ 1.97
SMIM20-201ENST00000506197 NPC1L1Q9UHC9 1359 aa27.36■■□□□ 1.97
SMIM20-201ENST00000506197 FYB1O15117 783 aa27.36■■□□□ 1.97
SMIM20-201ENST00000506197 CNGB1Q14028 1251 aaPredicted RBP27.36■■□□□ 1.97
SMIM20-201ENST00000506197 NUTM2GQ5VZR2 741 aa27.36■■□□□ 1.97
SMIM20-201ENST00000506197 SEPT12Q8IYM1 358 aa27.36■■□□□ 1.97
SMIM20-201ENST00000506197 CC2D1BQ5T0F9 858 aaKnown RBP27.35■■□□□ 1.97
SMIM20-201ENST00000506197 GGNBP2Q9H3C7 697 aa27.35■■□□□ 1.97
SMIM20-201ENST00000506197 KIAA0232Q92628 1395 aa27.35■■□□□ 1.97
SMIM20-201ENST00000506197 NLRP6P59044 892 aa27.34■■□□□ 1.97
SMIM20-201ENST00000506197 COG3Q96JB2 828 aa27.34■■□□□ 1.97
SMIM20-201ENST00000506197 NLRP13Q86W25 1043 aa27.33■■□□□ 1.97
SMIM20-201ENST00000506197 USP31Q70CQ4 1352 aa27.33■■□□□ 1.97
SMIM20-201ENST00000506197 ONECUT3O60422 494 aaPredicted RBP27.32■■□□□ 1.96
SMIM20-201ENST00000506197 OVOS2A0A0J9YW53 1432 aa27.32■■□□□ 1.96
SMIM20-201ENST00000506197 OVOS2Q6IE36 1432 aa27.32■■□□□ 1.96
SMIM20-201ENST00000506197 DIEXFQ68CQ4 756 aaKnown RBP27.31■■□□□ 1.96
SMIM20-201ENST00000506197 ZRANB1Q9UGI0 708 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms