RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 CDK19Q9BWU1 502 aa9.72□□□□□ -0.85
PPARGC1A-204ENST00000506055 DIAPH1O60610 1272 aaKnown RBP9.71□□□□□ -0.85
PPARGC1A-204ENST00000506055 TRIM27P14373 513 aa9.71□□□□□ -0.85
PPARGC1A-204ENST00000506055 ITPRIPQ8IWB1 547 aa9.71□□□□□ -0.85
PPARGC1A-204ENST00000506055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.71□□□□□ -0.851e-6■■■□□ 18.5
PPARGC1A-204ENST00000506055 SSH1Q8WYL5 1049 aa9.71□□□□□ -0.85
PPARGC1A-204ENST00000506055 UPF2Q9HAU5 1272 aaKnown RBP9.71□□□□□ -0.85
PPARGC1A-204ENST00000506055 NCBP3Q53F19 620 aaKnown RBP9.71□□□□□ -0.86
PPARGC1A-204ENST00000506055 HDGFL2Q7Z4V5 671 aaPredicted RBP9.71□□□□□ -0.86
PPARGC1A-204ENST00000506055 ARHGAP31Q2M1Z3 1444 aa9.71□□□□□ -0.86
PPARGC1A-204ENST00000506055 ATAD2Q6PL18 1390 aa9.71□□□□□ -0.86
PPARGC1A-204ENST00000506055 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
PPARGC1A-204ENST00000506055 ZFYVE9O95405 1425 aa9.7□□□□□ -0.86
PPARGC1A-204ENST00000506055 YTHDC2Q9H6S0 1430 aaKnown RBP9.7□□□□□ -0.86
PPARGC1A-204ENST00000506055 BECN1Q14457 450 aa9.7□□□□□ -0.86
PPARGC1A-204ENST00000506055 SLKQ9H2G2 1235 aaPredicted RBP9.7□□□□□ -0.86
PPARGC1A-204ENST00000506055 CT47B1P0C2W7 299 aaPredicted RBP9.69□□□□□ -0.86
PPARGC1A-204ENST00000506055 RTN4Q9NQC3 1192 aaKnown RBP9.69□□□□□ -0.86
PPARGC1A-204ENST00000506055 PTPRMP28827 1452 aa9.69□□□□□ -0.86
PPARGC1A-204ENST00000506055 ATF7IPQ6VMQ6 1270 aa9.69□□□□□ -0.86
PPARGC1A-204ENST00000506055 WAPLQ7Z5K2 1190 aa9.69□□□□□ -0.86
PPARGC1A-204ENST00000506055 MYO5BQ9ULV0 1848 aa9.68□□□□□ -0.86
PPARGC1A-204ENST00000506055 CD163L1Q9NR16 1453 aa9.68□□□□□ -0.86
PPARGC1A-204ENST00000506055 ADGRB2O60241 1585 aa9.68□□□□□ -0.86
PPARGC1A-204ENST00000506055 CYB5RLQ6IPT4 315 aa9.68□□□□□ -0.86
PPARGC1A-204ENST00000506055 TMEM57Q8N5G2 664 aa9.68□□□□□ -0.86
PPARGC1A-204ENST00000506055 PNNQ9H307 717 aaKnown RBP9.68□□□□□ -0.86
PPARGC1A-204ENST00000506055 DDX19BQ9UMR2 479 aa9.68□□□□□ -0.86
PPARGC1A-204ENST00000506055 TMEM131LA2VDJ0 1609 aa9.67□□□□□ -0.86
PPARGC1A-204ENST00000506055 TBC1D32Q96NH3 1257 aa9.67□□□□□ -0.86
PPARGC1A-204ENST00000506055 DNAJC5Q9H3Z4 198 aa9.67□□□□□ -0.86
PPARGC1A-204ENST00000506055 HMOX1P09601 288 aa9.67□□□□□ -0.86
PPARGC1A-204ENST00000506055 PRKAR2BP31323 418 aa9.67□□□□□ -0.86
PPARGC1A-204ENST00000506055 COL3A1P02461 1466 aaPredicted RBP9.67□□□□□ -0.86
PPARGC1A-204ENST00000506055 VIRMAQ69YN4 1812 aaKnown RBP9.66□□□□□ -0.86
PPARGC1A-204ENST00000506055 FCHSD2O94868 740 aa9.66□□□□□ -0.86
PPARGC1A-204ENST00000506055 IL16Q14005 1332 aa9.66□□□□□ -0.86
PPARGC1A-204ENST00000506055 RICTORQ6R327 1708 aa9.66□□□□□ -0.86
PPARGC1A-204ENST00000506055 SPRYD3Q8NCJ5 442 aa9.66□□□□□ -0.86
PPARGC1A-204ENST00000506055 BRPF3Q9ULD4 1205 aa9.66□□□□□ -0.86
PPARGC1A-204ENST00000506055 PREX1Q8TCU6 1659 aa9.66□□□□□ -0.86
PPARGC1A-204ENST00000506055 NLRP1Q9C000 1473 aa9.66□□□□□ -0.86
PPARGC1A-204ENST00000506055 IPO8O15397 1037 aaKnown RBP9.66□□□□□ -0.86
PPARGC1A-204ENST00000506055 POLKQ9UBT6 870 aa9.66□□□□□ -0.86
PPARGC1A-204ENST00000506055 MFAP1P55081 439 aaKnown RBP9.65□□□□□ -0.86
PPARGC1A-204ENST00000506055 HDAC1Q13547 482 aaPredicted RBP9.65□□□□□ -0.86
PPARGC1A-204ENST00000506055 MLECQ14165 292 aa9.65□□□□□ -0.86
PPARGC1A-204ENST00000506055 PHACTR3Q96KR7 559 aa9.65□□□□□ -0.86
PPARGC1A-204ENST00000506055 PNPLA6Q8IY17 1366 aa9.65□□□□□ -0.87
PPARGC1A-204ENST00000506055 FAM69CQ0P6D2 419 aa9.65□□□□□ -0.87
PPARGC1A-204ENST00000506055 THUMPD2Q9BTF0 503 aaKnown RBP9.65□□□□□ -0.87
PPARGC1A-204ENST00000506055 TBC1D2Q9BYX2 928 aa9.65□□□□□ -0.87
PPARGC1A-204ENST00000506055 ZBTB40Q9NUA8 1239 aa9.65□□□□□ -0.87
PPARGC1A-204ENST00000506055 ALKQ9UM73 1620 aa9.65□□□□□ -0.87
PPARGC1A-204ENST00000506055 RSPH6AQ9H0K4 717 aa9.64□□□□□ -0.87
PPARGC1A-204ENST00000506055 KIF16BQ96L93 1317 aa9.64□□□□□ -0.87
PPARGC1A-204ENST00000506055 ELL2O00472 640 aaPredicted RBP9.64□□□□□ -0.87
PPARGC1A-204ENST00000506055 EMILIN1Q9Y6C2 1016 aa9.64□□□□□ -0.87
PPARGC1A-204ENST00000506055 ARHGEF40Q8TER5 1519 aa9.64□□□□□ -0.87
PPARGC1A-204ENST00000506055 MED14O60244 1454 aa9.64□□□□□ -0.87
PPARGC1A-204ENST00000506055 ZMYM3Q14202 1370 aa9.63□□□□□ -0.87
PPARGC1A-204ENST00000506055 C22orf23Q9BZE7 217 aa9.63□□□□□ -0.87
PPARGC1A-204ENST00000506055 ZRANB1Q9UGI0 708 aa9.63□□□□□ -0.87
PPARGC1A-204ENST00000506055 ALDH1L2Q3SY69 923 aa9.62□□□□□ -0.87
PPARGC1A-204ENST00000506055 NME9Q86XW9 330 aa9.62□□□□□ -0.87
PPARGC1A-204ENST00000506055 ANTXR1Q9H6X2 564 aa9.62□□□□□ -0.87
PPARGC1A-204ENST00000506055 TXNDC2Q86VQ3 553 aa9.62□□□□□ -0.87
PPARGC1A-204ENST00000506055 SMC5Q8IY18 1101 aa9.62□□□□□ -0.87
PPARGC1A-204ENST00000506055 LNPKQ9C0E8 428 aa9.62□□□□□ -0.87
PPARGC1A-204ENST00000506055 NCKAP5LQ9HCH0 1330 aa9.61□□□□□ -0.87
PPARGC1A-204ENST00000506055 NFE2L2Q16236 605 aa9.61□□□□□ -0.87
PPARGC1A-204ENST00000506055 TSPYL6Q8N831 410 aa9.61□□□□□ -0.87
PPARGC1A-204ENST00000506055 ANKRD26Q9UPS8 1709 aa9.61□□□□□ -0.87
PPARGC1A-204ENST00000506055 CLTCQ00610 1675 aaKnown RBP9.61□□□□□ -0.87
PPARGC1A-204ENST00000506055 LRRC7Q96NW7 1537 aa9.6□□□□□ -0.87
PPARGC1A-204ENST00000506055 VAMP4O75379 141 aa9.6□□□□□ -0.87
PPARGC1A-204ENST00000506055 NUCB1Q02818 461 aa9.6□□□□□ -0.87
PPARGC1A-204ENST00000506055 RRS1Q15050 365 aaKnown RBP9.6□□□□□ -0.87
PPARGC1A-204ENST00000506055 C1orf115Q9H7X2 142 aa9.6□□□□□ -0.87
PPARGC1A-204ENST00000506055 WASLO00401 505 aaPredicted RBP9.6□□□□□ -0.87
PPARGC1A-204ENST00000506055 IL13P35225 146 aa9.59□□□□□ -0.87
PPARGC1A-204ENST00000506055 ANKRD45Q5TZF3 282 aa9.59□□□□□ -0.87
PPARGC1A-204ENST00000506055 CHD1LQ86WJ1 897 aa9.59□□□□□ -0.87
PPARGC1A-204ENST00000506055 MBIPQ9NS73 344 aa9.59□□□□□ -0.87
PPARGC1A-204ENST00000506055 FAM135BQ49AJ0 1406 aa9.59□□□□□ -0.87
PPARGC1A-204ENST00000506055 RIMS2Q9UQ26 1411 aa9.59□□□□□ -0.87
PPARGC1A-204ENST00000506055 ZBTB7BO15156 539 aaPredicted RBP9.59□□□□□ -0.87
PPARGC1A-204ENST00000506055 GNAI1P63096 354 aa9.59□□□□□ -0.87
PPARGC1A-204ENST00000506055 CALD1Q05682 793 aaKnown RBP9.59□□□□□ -0.87
PPARGC1A-204ENST00000506055 PPIP5K1Q6PFW1 1433 aa9.59□□□□□ -0.87
PPARGC1A-204ENST00000506055 KIF20BQ96Q89 1820 aa9.59□□□□□ -0.87
PPARGC1A-204ENST00000506055 A2ML1A8K2U0 1454 aa9.59□□□□□ -0.87
PPARGC1A-204ENST00000506055 FAM83GA6ND36 823 aa9.58□□□□□ -0.88
PPARGC1A-204ENST00000506055 MRPL50Q8N5N7 158 aaKnown RBP9.58□□□□□ -0.88
PPARGC1A-204ENST00000506055 NUDT16Q96DE0 195 aaKnown RBP9.58□□□□□ -0.88
PPARGC1A-204ENST00000506055 COG3Q96JB2 828 aa9.58□□□□□ -0.88
PPARGC1A-204ENST00000506055 DCTN1Q14203 1278 aa9.58□□□□□ -0.88
PPARGC1A-204ENST00000506055 ZNF428Q96B54 188 aa9.58□□□□□ -0.88
PPARGC1A-204ENST00000506055 METP08581 1390 aa9.58□□□□□ -0.88
PPARGC1A-204ENST00000506055 TWISTNBQ3B726 338 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms