RNA–Protein interactions for RNA: ENST00000505905.1

LIN54-205, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN54, Length 810 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-205ENST00000505905 F12P00748 615 aaPredicted RBP13.24□□□□□ -0.29
LIN54-205ENST00000505905 BMP1P13497 986 aa13.24□□□□□ -0.29
LIN54-205ENST00000505905 MPNDQ8N594 471 aa13.24□□□□□ -0.29
LIN54-205ENST00000505905 TERTO14746 1132 aaKnown RBP13.23□□□□□ -0.29
LIN54-205ENST00000505905 CAPN5O15484 640 aaPredicted RBP13.23□□□□□ -0.29
LIN54-205ENST00000505905 WIPF1O43516 503 aa13.23□□□□□ -0.29
LIN54-205ENST00000505905 PRPF38BQ5VTL8 546 aaKnown RBP13.23□□□□□ -0.29
LIN54-205ENST00000505905 RIC3Q7Z5B4 369 aa13.23□□□□□ -0.29
LIN54-205ENST00000505905 CABLES1Q8TDN4 633 aa13.23□□□□□ -0.29
LIN54-205ENST00000505905 ZBTB3Q9H5J0 574 aa13.23□□□□□ -0.29
LIN54-205ENST00000505905 VARSP26640 1264 aaKnown RBP13.22□□□□□ -0.29
LIN54-205ENST00000505905 MAP10Q9P2G4 905 aa13.21□□□□□ -0.29
LIN54-205ENST00000505905 PDE4DQ08499 809 aa13.2□□□□□ -0.3
LIN54-205ENST00000505905 LIMD1Q9UGP4 676 aa13.2□□□□□ -0.3
LIN54-205ENST00000505905 CTHP32929 405 aa13.19□□□□□ -0.3
LIN54-205ENST00000505905 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
LIN54-205ENST00000505905 PER1O15534 1290 aaPredicted RBP13.18□□□□□ -0.3
LIN54-205ENST00000505905 NNTQ13423 1086 aa13.17□□□□□ -0.3
LIN54-205ENST00000505905 QPCTQ16769 361 aa13.17□□□□□ -0.3
LIN54-205ENST00000505905 TUSC1Q2TAM9 212 aa13.16□□□□□ -0.3
LIN54-205ENST00000505905 FOXJ1Q92949 421 aa13.16□□□□□ -0.3
LIN54-205ENST00000505905 KLF16Q9BXK1 252 aaPredicted RBP13.16□□□□□ -0.3
LIN54-205ENST00000505905 PLEKHG3A1L390 1219 aa13.15□□□□□ -0.3
LIN54-205ENST00000505905 CSPP1Q1MSJ5 1256 aa13.15□□□□□ -0.3
LIN54-205ENST00000505905 LILRB3O75022 631 aa13.14□□□□□ -0.31
LIN54-205ENST00000505905 C4orf48Q5BLP8 95 aa13.14□□□□□ -0.31
LIN54-205ENST00000505905 TIMP2P16035 220 aa13.13□□□□□ -0.31
LIN54-205ENST00000505905 CDK15Q96Q40 435 aa13.13□□□□□ -0.31
LIN54-205ENST00000505905 SLC24A3Q9HC58 644 aa13.13□□□□□ -0.31
LIN54-205ENST00000505905 ADH1CP00326 375 aa13.12□□□□□ -0.31
LIN54-205ENST00000505905 FAM174AQ8TBP5 190 aa13.12□□□□□ -0.31
LIN54-205ENST00000505905 ZFP42Q96MM3 310 aa13.11□□□□□ -0.31
LIN54-205ENST00000505905 NXF1Q9UBU9 619 aaKnown RBP13.1□□□□□ -0.31
LIN54-205ENST00000505905 WDR4P57081 412 aaKnown RBP13.08□□□□□ -0.32
LIN54-205ENST00000505905 RTL5Q5HYW3 569 aaPredicted RBP13.08□□□□□ -0.32
LIN54-205ENST00000505905 NR3C2P08235 984 aa13.06□□□□□ -0.32
LIN54-205ENST00000505905 GRM5P41594 1212 aa13.06□□□□□ -0.32
LIN54-205ENST00000505905 INSM1Q01101 510 aaPredicted RBP13.06□□□□□ -0.32
LIN54-205ENST00000505905 MRPL14Q6P1L8 145 aaKnown RBP13.06□□□□□ -0.32
LIN54-205ENST00000505905 STK17AQ9UEE5 414 aa13.06□□□□□ -0.32
LIN54-205ENST00000505905 NUTM2BA6NNL0 878 aaPredicted RBP13.05□□□□□ -0.32
LIN54-205ENST00000505905 NUTM2EB1AL46 878 aaPredicted RBP13.05□□□□□ -0.32
LIN54-205ENST00000505905 NUTM2DQ5VT03 806 aaPredicted RBP13.05□□□□□ -0.32
LIN54-205ENST00000505905 NUTM2AQ8IVF1 878 aaPredicted RBP13.05□□□□□ -0.32
LIN54-205ENST00000505905 C1QTNF2Q9BXJ5 285 aa13.05□□□□□ -0.32
LIN54-205ENST00000505905 SH3RF1Q7Z6J0 888 aa13.04□□□□□ -0.32
LIN54-205ENST00000505905 NPAS3Q8IXF0 933 aa13.04□□□□□ -0.32
LIN54-205ENST00000505905 H3BM21 787 aa13.03□□□□□ -0.32
LIN54-205ENST00000505905 CLK2P49760 499 aaKnown RBP13.03□□□□□ -0.32
LIN54-205ENST00000505905 BPHLQ86WA6 291 aaPredicted RBP13.03□□□□□ -0.32
LIN54-205ENST00000505905 TSC1Q92574 1164 aa13.03□□□□□ -0.32
LIN54-205ENST00000505905 ZFAND3Q9H8U3 227 aa13.03□□□□□ -0.32
LIN54-205ENST00000505905 VEGFBP49765 207 aa13.02□□□□□ -0.33
LIN54-205ENST00000505905 ARID5BQ14865 1188 aa13.02□□□□□ -0.33
LIN54-205ENST00000505905 ITPKCQ96DU7 683 aa13.02□□□□□ -0.33
LIN54-205ENST00000505905 PURBQ96QR8 312 aaKnown RBP13.02□□□□□ -0.33
LIN54-205ENST00000505905 NR5A1Q13285 461 aa13.01□□□□□ -0.33
LIN54-205ENST00000505905 SH3BP5LQ7L8J4 393 aa13.01□□□□□ -0.33
LIN54-205ENST00000505905 SLC16A10Q8TF71 515 aa13.01□□□□□ -0.33
LIN54-205ENST00000505905 ZIC2O95409 532 aaPredicted RBP13□□□□□ -0.33
LIN54-205ENST00000505905 LORP23490 312 aaPredicted RBP13□□□□□ -0.33
LIN54-205ENST00000505905 GMPRP36959 345 aa13□□□□□ -0.33
LIN54-205ENST00000505905 ERBB4Q15303 1308 aa12.99□□□□□ -0.33
LIN54-205ENST00000505905 AGERQ15109 404 aa12.99□□□□□ -0.33
LIN54-205ENST00000505905 HELBQ8NG08 1087 aaPredicted RBP12.99□□□□□ -0.33
LIN54-205ENST00000505905 SCARF1Q14162 830 aa12.98□□□□□ -0.33
LIN54-205ENST00000505905 ARMC2Q8NEN0 867 aa12.98□□□□□ -0.33
LIN54-205ENST00000505905 POLR3EQ9NVU0 708 aa12.98□□□□□ -0.33
LIN54-205ENST00000505905 SOBPA7XYQ1 873 aa12.97□□□□□ -0.33
LIN54-205ENST00000505905 FBXO31Q5XUX0 539 aaPredicted RBP12.97□□□□□ -0.33
LIN54-205ENST00000505905 TRMT44Q8IYL2 757 aaKnown RBP12.97□□□□□ -0.33
LIN54-205ENST00000505905 NBPF14Q5TI25 921 aa12.96□□□□□ -0.33
LIN54-205ENST00000505905 RSPH6AQ9H0K4 717 aa12.96□□□□□ -0.33
LIN54-205ENST00000505905 MAP4K5Q9Y4K4 846 aa12.96□□□□□ -0.33
LIN54-205ENST00000505905 IRF7Q92985 503 aa12.95□□□□□ -0.34
LIN54-205ENST00000505905 MEIOBQ8N635 442 aa12.94□□□□□ -0.34
LIN54-205ENST00000505905 CTDSPL2Q05D32 466 aa12.93□□□□□ -0.34
LIN54-205ENST00000505905 FSHRP23945 695 aa12.92□□□□□ -0.34
LIN54-205ENST00000505905 C6orf118Q5T5N4 469 aa12.9□□□□□ -0.34
LIN54-205ENST00000505905 GPKOWQ92917 476 aaPredicted RBP eCLIP12.9□□□□□ -0.34
LIN54-205ENST00000505905 MAGEB6P1A0A0J9YX57 407 aa12.89□□□□□ -0.35
LIN54-205ENST00000505905 VSIG8P0DPA2 414 aa12.89□□□□□ -0.35
LIN54-205ENST00000505905 ERFEQ4G0M1 354 aa12.89□□□□□ -0.35
LIN54-205ENST00000505905 LRRN4Q8WUT4 740 aa12.89□□□□□ -0.35
LIN54-205ENST00000505905 VASH1Q7L8A9 365 aaPredicted RBP12.88□□□□□ -0.35
LIN54-205ENST00000505905 LINC00528Q8N1L1 170 aa12.88□□□□□ -0.35
LIN54-205ENST00000505905 SKIV2LQ15477 1246 aaKnown RBP12.87□□□□□ -0.35
LIN54-205ENST00000505905 SH3D19Q5HYK7 790 aa12.87□□□□□ -0.35
LIN54-205ENST00000505905 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.87□□□□□ -0.35
LIN54-205ENST00000505905 GPBP1L1Q9HC44 474 aaPredicted RBP12.87□□□□□ -0.35
LIN54-205ENST00000505905 PROCA1Q8NCQ7 364 aaPredicted RBP12.86□□□□□ -0.35
LIN54-205ENST00000505905 CARD14Q9BXL6 1004 aa12.86□□□□□ -0.35
LIN54-205ENST00000505905 SOS2Q07890 1332 aaPredicted RBP12.86□□□□□ -0.35
LIN54-205ENST00000505905 KDM4CQ9H3R0 1056 aa12.85□□□□□ -0.35
LIN54-205ENST00000505905 MAN1A2O60476 641 aa12.84□□□□□ -0.35
LIN54-205ENST00000505905 BMP2P12643 396 aa12.84□□□□□ -0.35
LIN54-205ENST00000505905 PPP2R2DQ66LE6 453 aa12.84□□□□□ -0.35
LIN54-205ENST00000505905 PDXDC2PQ6P474 469 aa12.84□□□□□ -0.35
LIN54-205ENST00000505905 CCDC116Q8IYX3 515 aa12.84□□□□□ -0.35
LIN54-205ENST00000505905 ZSCAN1Q8NBB4 408 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms