RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 TMPOP42166 694 aaKnown RBP25.23■■□□□ 1.63
SDHA-206ENST00000505555 MYH16Q9H6N6 1097 aa25.23■■□□□ 1.63
SDHA-206ENST00000505555 TNNQ9UQP3 1299 aa25.23■■□□□ 1.63
SDHA-206ENST00000505555 PPM1GO15355 546 aaPredicted RBP25.22■■□□□ 1.63
SDHA-206ENST00000505555 IGHDP01880 384 aa25.22■■□□□ 1.63
SDHA-206ENST00000505555 TSR2Q969E8 191 aaKnown RBP25.22■■□□□ 1.63
SDHA-206ENST00000505555 NRXN3Q9Y4C0 1643 aa25.21■■□□□ 1.63
SDHA-206ENST00000505555 ANKRD26Q9UPS8 1709 aa25.21■■□□□ 1.63
SDHA-206ENST00000505555 ZBTB47Q9UFB7 747 aaPredicted RBP25.21■■□□□ 1.63
SDHA-206ENST00000505555 ADGRB2O60241 1585 aa25.21■■□□□ 1.63
SDHA-206ENST00000505555 WASLO00401 505 aaPredicted RBP25.21■■□□□ 1.63
SDHA-206ENST00000505555 NCBP3Q53F19 620 aaKnown RBP25.21■■□□□ 1.63
SDHA-206ENST00000505555 TRIM35Q9UPQ4 493 aa25.21■■□□□ 1.63
SDHA-206ENST00000505555 MAPK8IP3Q9UPT6 1336 aa25.2■■□□□ 1.63
SDHA-206ENST00000505555 NCKAP5LQ9HCH0 1330 aa25.2■■□□□ 1.62
SDHA-206ENST00000505555 RGS3P49796 1198 aa25.2■■□□□ 1.62
SDHA-206ENST00000505555 RLBP1P12271 317 aa25.18■■□□□ 1.62
SDHA-206ENST00000505555 PNPLA6Q8IY17 1366 aa25.18■■□□□ 1.62
SDHA-206ENST00000505555 TNRQ92752 1358 aa25.18■■□□□ 1.62
SDHA-206ENST00000505555 CLUAP1Q96AJ1 413 aa25.18■■□□□ 1.62
SDHA-206ENST00000505555 POLKQ9UBT6 870 aa25.17■■□□□ 1.62
SDHA-206ENST00000505555 ATP7BP35670 1465 aa25.16■■□□□ 1.62
SDHA-206ENST00000505555 ZRANB1Q9UGI0 708 aa25.16■■□□□ 1.62
SDHA-206ENST00000505555 PPIP5K1Q6PFW1 1433 aa25.16■■□□□ 1.62
SDHA-206ENST00000505555 KIF20BQ96Q89 1820 aa25.16■■□□□ 1.62
SDHA-206ENST00000505555 RIPK4P57078 832 aa25.16■■□□□ 1.62
SDHA-206ENST00000505555 NME9Q86XW9 330 aa25.15■■□□□ 1.62
SDHA-206ENST00000505555 NUDT16Q96DE0 195 aaKnown RBP25.15■■□□□ 1.62
SDHA-206ENST00000505555 HDGFP51858 240 aaKnown RBP25.14■■□□□ 1.62
SDHA-206ENST00000505555 EXOSC9Q06265 439 aaKnown RBP25.14■■□□□ 1.61
SDHA-206ENST00000505555 CPSF1Q10570 1443 aaKnown RBP25.12■■□□□ 1.61
SDHA-206ENST00000505555 TMEM2Q9UHN6 1383 aa25.11■■□□□ 1.61
SDHA-206ENST00000505555 EMILIN1Q9Y6C2 1016 aa25.11■■□□□ 1.61
SDHA-206ENST00000505555 CEBPAP49715 358 aaPredicted RBP25.1■■□□□ 1.61
SDHA-206ENST00000505555 C8orf34Q49A92 452 aa25.09■■□□□ 1.61
SDHA-206ENST00000505555 FCHSD2O94868 740 aa25.09■■□□□ 1.61
SDHA-206ENST00000505555 PRKAR2BP31323 418 aa25.09■■□□□ 1.61
SDHA-206ENST00000505555 FAM161AQ3B820 660 aa25.09■■□□□ 1.61
SDHA-206ENST00000505555 CCDC61Q9Y6R9 512 aa25.09■■□□□ 1.61
SDHA-206ENST00000505555 EDC4Q6P2E9 1401 aaKnown RBP25.08■■□□□ 1.61
SDHA-206ENST00000505555 HMOX1P09601 288 aa25.08■■□□□ 1.61
SDHA-206ENST00000505555 NBR1Q14596 966 aa25.08■■□□□ 1.61
SDHA-206ENST00000505555 PCDHB15Q9Y5E8 787 aa25.08■■□□□ 1.61
SDHA-206ENST00000505555 RSPH6AQ9H0K4 717 aa25.08■■□□□ 1.6
SDHA-206ENST00000505555 PNNQ9H307 717 aaKnown RBP25.08■■□□□ 1.6
SDHA-206ENST00000505555 FAM135BQ49AJ0 1406 aa25.07■■□□□ 1.6
SDHA-206ENST00000505555 LTKP29376 864 aa25.06■■□□□ 1.6
SDHA-206ENST00000505555 PLPPR3Q6T4P5 718 aa25.06■■□□□ 1.6
SDHA-206ENST00000505555 SIRT1Q96EB6 747 aa25.06■■□□□ 1.6
SDHA-206ENST00000505555 ROBO2Q9HCK4 1378 aa25.06■■□□□ 1.6
SDHA-206ENST00000505555 SMC4Q9NTJ3 1288 aa25.06■■□□□ 1.6
SDHA-206ENST00000505555 PHACTR3Q96KR7 559 aa25.05■■□□□ 1.6
SDHA-206ENST00000505555 PRR36Q9H6K5 1346 aa25.05■■□□□ 1.6
SDHA-206ENST00000505555 ZKSCAN2Q63HK3 967 aa25.05■■□□□ 1.6
SDHA-206ENST00000505555 SSH1Q8WYL5 1049 aa25.05■■□□□ 1.6
SDHA-206ENST00000505555 TECPR2O15040 1411 aa25.05■■□□□ 1.6
SDHA-206ENST00000505555 UBR1Q8IWV7 1749 aa25.04■■□□□ 1.6
SDHA-206ENST00000505555 IL16Q14005 1332 aa25.04■■□□□ 1.6
SDHA-206ENST00000505555 LRRC7Q96NW7 1537 aa25.04■■□□□ 1.6
SDHA-206ENST00000505555 CT47B1P0C2W7 299 aaPredicted RBP25.04■■□□□ 1.6
SDHA-206ENST00000505555 RRS1Q15050 365 aaKnown RBP25.04■■□□□ 1.6
SDHA-206ENST00000505555 CPS1P31327 1500 aa25.03■■□□□ 1.6
SDHA-206ENST00000505555 NUTM2FA1L443 756 aa25.03■■□□□ 1.6
SDHA-206ENST00000505555 MAP2P11137 1827 aaKnown RBP25.03■■□□□ 1.6
SDHA-206ENST00000505555 COG3Q96JB2 828 aa25.02■■□□□ 1.6
SDHA-206ENST00000505555 ADAMTS13Q76LX8 1427 aa25.02■■□□□ 1.6
SDHA-206ENST00000505555 IL13P35225 146 aa25.01■■□□□ 1.59
SDHA-206ENST00000505555 MVPQ14764 893 aaKnown RBP25.01■■□□□ 1.59
SDHA-206ENST00000505555 FTSJ3Q8IY81 847 aaKnown RBP25.01■■□□□ 1.59
SDHA-206ENST00000505555 DZIP1LQ8IYY4 767 aaKnown RBP25.01■■□□□ 1.59
SDHA-206ENST00000505555 SLC26A8Q96RN1 970 aa25.01■■□□□ 1.59
SDHA-206ENST00000505555 LAS1LQ9Y4W2 734 aaKnown RBP25■■□□□ 1.59
SDHA-206ENST00000505555 CDC42BPGQ6DT37 1551 aa25■■□□□ 1.59
SDHA-206ENST00000505555 KNDC1Q76NI1 1749 aa25■■□□□ 1.59
SDHA-206ENST00000505555 NEFMP07197 916 aa25■■□□□ 1.59
SDHA-206ENST00000505555 PMFBP1Q8TBY8 1022 aa25■■□□□ 1.59
SDHA-206ENST00000505555 TRIM27P14373 513 aa24.99■■□□□ 1.59
SDHA-206ENST00000505555 THUMPD2Q9BTF0 503 aaKnown RBP24.99■■□□□ 1.59
SDHA-206ENST00000505555 AAMPQ13685 434 aa24.98■■□□□ 1.59
SDHA-206ENST00000505555 NOB1Q9ULX3 412 aaKnown RBP24.98■■□□□ 1.59
SDHA-206ENST00000505555 NFE2L2Q16236 605 aa24.97■■□□□ 1.59
SDHA-206ENST00000505555 ZNF692Q9BU19 519 aaPredicted RBP24.96■■□□□ 1.59
SDHA-206ENST00000505555 AATKQ6ZMQ8 1374 aa24.95■■□□□ 1.59
SDHA-206ENST00000505555 PLEKHG1Q9ULL1 1385 aa24.95■■□□□ 1.58
SDHA-206ENST00000505555 ATF7IPQ6VMQ6 1270 aa24.94■■□□□ 1.58
SDHA-206ENST00000505555 CDK12Q9NYV4 1490 aaPredicted RBP24.93■■□□□ 1.58
SDHA-206ENST00000505555 DDRGK1Q96HY6 314 aa24.93■■□□□ 1.58
SDHA-206ENST00000505555 RWDD1Q9H446 243 aaPredicted RBP24.93■■□□□ 1.58
SDHA-206ENST00000505555 MON2Q7Z3U7 1717 aa24.93■■□□□ 1.58
SDHA-206ENST00000505555 ACEP12821 1306 aa24.92■■□□□ 1.58
SDHA-206ENST00000505555 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.92■■□□□ 1.58
SDHA-206ENST00000505555 ITPRIPQ8IWB1 547 aa24.92■■□□□ 1.58
SDHA-206ENST00000505555 PDZRN3Q9UPQ7 1066 aa24.92■■□□□ 1.58
SDHA-206ENST00000505555 PTPRUQ92729 1446 aa24.91■■□□□ 1.58
SDHA-206ENST00000505555 SLC4A3P48751 1232 aa24.91■■□□□ 1.58
SDHA-206ENST00000505555 EID1Q9Y6B2 187 aa24.91■■□□□ 1.58
SDHA-206ENST00000505555 TTC21BQ7Z4L5 1316 aa24.9■■□□□ 1.58
SDHA-206ENST00000505555 BCL11AQ9H165 835 aa24.9■■□□□ 1.58
SDHA-206ENST00000505555 TMEM57Q8N5G2 664 aa24.89■■□□□ 1.58
SDHA-206ENST00000505555 AKAP12Q02952 1782 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms