RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 ZNF772Q68DY9 489 aaPredicted RBP12.26□□□□□ -0.45
CTSB-205ENST00000505496 C8orf37Q96NL8 207 aa12.26□□□□□ -0.45
CTSB-205ENST00000505496 CD163L1Q9NR16 1453 aa12.26□□□□□ -0.45
CTSB-205ENST00000505496 PAK3O75914 559 aaPredicted RBP12.25□□□□□ -0.45
CTSB-205ENST00000505496 AFF2P51816 1311 aa12.25□□□□□ -0.45
CTSB-205ENST00000505496 NINLQ9Y2I6 1382 aa12.25□□□□□ -0.45
CTSB-205ENST00000505496 USP19O94966 1318 aa12.24□□□□□ -0.45
CTSB-205ENST00000505496 TMF1P82094 1093 aa12.24□□□□□ -0.45
CTSB-205ENST00000505496 LMOD2Q6P5Q4 547 aa12.24□□□□□ -0.45
CTSB-205ENST00000505496 CABLES1Q8TDN4 633 aa12.24□□□□□ -0.45
CTSB-205ENST00000505496 BCL9LQ86UU0 1499 aa12.23□□□□□ -0.45
CTSB-205ENST00000505496 NGLY1Q96IV0 654 aa12.23□□□□□ -0.45
CTSB-205ENST00000505496 SLC12A5Q9H2X9 1139 aa12.23□□□□□ -0.45
CTSB-205ENST00000505496 SLIT2O94813 1529 aa12.22□□□□□ -0.45
CTSB-205ENST00000505496 TTC21BQ7Z4L5 1316 aa12.22□□□□□ -0.45
CTSB-205ENST00000505496 EIF4G2P78344 907 aaKnown RBP eCLIP12.22□□□□□ -0.45
CTSB-205ENST00000505496 CDCA8Q53HL2 280 aa12.22□□□□□ -0.45
CTSB-205ENST00000505496 ABTB2Q8N961 1025 aa12.22□□□□□ -0.45
CTSB-205ENST00000505496 KTN1Q86UP2 1357 aaKnown RBP12.21□□□□□ -0.45
CTSB-205ENST00000505496 TTC21AQ8NDW8 1320 aa12.21□□□□□ -0.45
CTSB-205ENST00000505496 ABCA3Q99758 1704 aa12.2□□□□□ -0.46
CTSB-205ENST00000505496 CRYBG1Q9Y4K1 1723 aa12.2□□□□□ -0.46
CTSB-205ENST00000505496 A0A1W2PP64 1363 aa12.2□□□□□ -0.46
CTSB-205ENST00000505496 FAM83GA6ND36 823 aa12.2□□□□□ -0.46
CTSB-205ENST00000505496 HSPA5P11021 654 aaKnown RBP12.2□□□□□ -0.46
CTSB-205ENST00000505496 NLRP13Q86W25 1043 aa12.2□□□□□ -0.46
CTSB-205ENST00000505496 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
CTSB-205ENST00000505496 QTRT2Q9H974 415 aaKnown RBP12.2□□□□□ -0.46
CTSB-205ENST00000505496 TERF2IPQ9NYB0 399 aa12.2□□□□□ -0.46
CTSB-205ENST00000505496 USP21Q9UK80 565 aa12.2□□□□□ -0.46
CTSB-205ENST00000505496 ATRNO75882 1429 aa12.2□□□□□ -0.46
CTSB-205ENST00000505496 NRKQ7Z2Y5 1582 aa12.19□□□□□ -0.46
CTSB-205ENST00000505496 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
CTSB-205ENST00000505496 NUTM2GQ5VZR2 741 aa12.19□□□□□ -0.46
CTSB-205ENST00000505496 HDGFL2Q7Z4V5 671 aaPredicted RBP12.19□□□□□ -0.46
CTSB-205ENST00000505496 EDC4Q6P2E9 1401 aaKnown RBP12.19□□□□□ -0.46
CTSB-205ENST00000505496 CPDO75976 1380 aa12.18□□□□□ -0.46
CTSB-205ENST00000505496 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
CTSB-205ENST00000505496 ANKRD36BQ8N2N9 1353 aa12.18□□□□□ -0.46
CTSB-205ENST00000505496 AKAP12Q02952 1782 aa12.18□□□□□ -0.46
CTSB-205ENST00000505496 MARF1Q9Y4F3 1742 aaKnown RBP12.18□□□□□ -0.46
CTSB-205ENST00000505496 GCP02774 474 aa12.18□□□□□ -0.46
CTSB-205ENST00000505496 NLRP6P59044 892 aa12.18□□□□□ -0.46
CTSB-205ENST00000505496 UNC5CLQ8IV45 518 aa12.18□□□□□ -0.46
CTSB-205ENST00000505496 TRPC5Q9UL62 973 aaPredicted RBP12.18□□□□□ -0.46
CTSB-205ENST00000505496 CDK12Q9NYV4 1490 aaPredicted RBP12.18□□□□□ -0.46
CTSB-205ENST00000505496 SLIT3O75094 1523 aa12.17□□□□□ -0.46
CTSB-205ENST00000505496 PIK3C2AO00443 1686 aa12.17□□□□□ -0.46
CTSB-205ENST00000505496 RXRBP28702 533 aa12.17□□□□□ -0.46
CTSB-205ENST00000505496 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
CTSB-205ENST00000505496 MON2Q7Z3U7 1717 aa12.17□□□□□ -0.46
CTSB-205ENST00000505496 KIAA0232Q92628 1395 aa12.17□□□□□ -0.46
CTSB-205ENST00000505496 PHRF1Q9P1Y6 1649 aaKnown RBP12.15□□□□□ -0.46
CTSB-205ENST00000505496 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.15□□□□□ -0.46
CTSB-205ENST00000505496 SOCS7O14512 581 aa12.15□□□□□ -0.46
CTSB-205ENST00000505496 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
CTSB-205ENST00000505496 VPS72Q15906 364 aa12.15□□□□□ -0.46
CTSB-205ENST00000505496 PRDM11Q9NQV5 511 aa12.15□□□□□ -0.46
CTSB-205ENST00000505496 ZC3H6P61129 1189 aaKnown RBP12.14□□□□□ -0.47
CTSB-205ENST00000505496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.14□□□□□ -0.47
CTSB-205ENST00000505496 GJD4Q96KN9 370 aaPredicted RBP12.14□□□□□ -0.47
CTSB-205ENST00000505496 BTG4Q9NY30 223 aa12.14□□□□□ -0.47
CTSB-205ENST00000505496 COL14A1Q05707 1796 aaKnown RBP12.14□□□□□ -0.47
CTSB-205ENST00000505496 NWD2Q9ULI1 1742 aa12.14□□□□□ -0.47
CTSB-205ENST00000505496 USP54Q70EL1 1684 aa12.13□□□□□ -0.47
CTSB-205ENST00000505496 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
CTSB-205ENST00000505496 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
CTSB-205ENST00000505496 C11orf95C9JLR9 678 aaPredicted RBP12.13□□□□□ -0.47
CTSB-205ENST00000505496 NME9Q86XW9 330 aa12.13□□□□□ -0.47
CTSB-205ENST00000505496 KCNH5Q8NCM2 988 aa12.13□□□□□ -0.47
CTSB-205ENST00000505496 NFAT5O94916 1531 aa12.12□□□□□ -0.47
CTSB-205ENST00000505496 ONECUT3O60422 494 aaPredicted RBP12.12□□□□□ -0.47
CTSB-205ENST00000505496 ARHGEF25Q86VW2 580 aa12.12□□□□□ -0.47
CTSB-205ENST00000505496 CARD14Q9BXL6 1004 aa12.12□□□□□ -0.47
CTSB-205ENST00000505496 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
CTSB-205ENST00000505496 AATKQ6ZMQ8 1374 aa12.12□□□□□ -0.47
CTSB-205ENST00000505496 PLCH1Q4KWH8 1693 aa12.12□□□□□ -0.47
CTSB-205ENST00000505496 RGS12O14924 1447 aa12.11□□□□□ -0.47
CTSB-205ENST00000505496 MYOM1P52179 1685 aa12.11□□□□□ -0.47
CTSB-205ENST00000505496 LMO7Q8WWI1 1683 aa12.11□□□□□ -0.47
CTSB-205ENST00000505496 CHRNA2Q15822 529 aa12.11□□□□□ -0.47
CTSB-205ENST00000505496 FYB1O15117 783 aa12.1□□□□□ -0.47
CTSB-205ENST00000505496 NRAPQ86VF7 1730 aa12.1□□□□□ -0.47
CTSB-205ENST00000505496 SPATA31A5Q5VU36 1347 aa12.1□□□□□ -0.47
CTSB-205ENST00000505496 SPATA31A7Q8IWB4 1347 aa12.1□□□□□ -0.47
CTSB-205ENST00000505496 CAMTA1Q9Y6Y1 1673 aa12.1□□□□□ -0.47
CTSB-205ENST00000505496 GLI3P10071 1580 aa12.09□□□□□ -0.47
CTSB-205ENST00000505496 KIF7Q2M1P5 1343 aa12.09□□□□□ -0.47
CTSB-205ENST00000505496 ABCC6O95255 1503 aa12.08□□□□□ -0.48
CTSB-205ENST00000505496 AXIN2Q9Y2T1 843 aa12.08□□□□□ -0.48
CTSB-205ENST00000505496 NSD3Q9BZ95 1437 aa12.08□□□□□ -0.48
CTSB-205ENST00000505496 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.48
CTSB-205ENST00000505496 COG3Q96JB2 828 aa12.07□□□□□ -0.48
CTSB-205ENST00000505496 SPATA31A1Q5TZJ5 1347 aa12.07□□□□□ -0.48
CTSB-205ENST00000505496 COL18A1P39060 1754 aa12.06□□□□□ -0.48
CTSB-205ENST00000505496 LARP1Q6PKG0 1096 aaKnown RBP12.05□□□□□ -0.48
CTSB-205ENST00000505496 GGNBP2Q9H3C7 697 aa12.05□□□□□ -0.48
CTSB-205ENST00000505496 PANK3Q9H999 370 aa12.05□□□□□ -0.48
CTSB-205ENST00000505496 EP400Q96L91 3159 aa12.04□□□□□ -0.48
CTSB-205ENST00000505496 SOX12O15370 315 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms