RNA–Protein interactions for RNA: ENST00000505469.1

PPARGC1A-203, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 2

Gene PPARGC1A, Length 406 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-203ENST00000505469 USP54Q70EL1 1684 aa12.42□□□□□ -0.42
PPARGC1A-203ENST00000505469 SLC24A1O60721 1099 aa12.42□□□□□ -0.42
PPARGC1A-203ENST00000505469 SIN3AQ96ST3 1273 aa12.42□□□□□ -0.42
PPARGC1A-203ENST00000505469 SAFB2Q14151 953 aaKnown RBP eCLIP12.41□□□□□ -0.42
PPARGC1A-203ENST00000505469 NBPF1Q3BBV0 1214 aa12.41□□□□□ -0.42
PPARGC1A-203ENST00000505469 KRT28Q7Z3Y7 464 aa12.41□□□□□ -0.42
PPARGC1A-203ENST00000505469 NRAPQ86VF7 1730 aa12.41□□□□□ -0.42
PPARGC1A-203ENST00000505469 FNBP4Q8N3X1 1017 aaPredicted RBP12.41□□□□□ -0.42
PPARGC1A-203ENST00000505469 DDX17Q92841 729 aaKnown RBP12.41□□□□□ -0.42
PPARGC1A-203ENST00000505469 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
PPARGC1A-203ENST00000505469 PRR36Q9H6K5 1346 aa12.4□□□□□ -0.42
PPARGC1A-203ENST00000505469 PLEKHG3A1L390 1219 aa12.4□□□□□ -0.42
PPARGC1A-203ENST00000505469 SLIT2O94813 1529 aa12.4□□□□□ -0.42
PPARGC1A-203ENST00000505469 POTEAQ6S8J7 498 aa12.39□□□□□ -0.43
PPARGC1A-203ENST00000505469 NUDT16Q96DE0 195 aaKnown RBP12.39□□□□□ -0.43
PPARGC1A-203ENST00000505469 NRKQ7Z2Y5 1582 aa12.39□□□□□ -0.43
PPARGC1A-203ENST00000505469 AFF2P51816 1311 aa12.38□□□□□ -0.43
PPARGC1A-203ENST00000505469 NUTM2FA1L443 756 aa12.38□□□□□ -0.43
PPARGC1A-203ENST00000505469 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
PPARGC1A-203ENST00000505469 POLA2Q14181 598 aa12.38□□□□□ -0.43
PPARGC1A-203ENST00000505469 HIRIP3Q9BW71 556 aaPredicted RBP12.38□□□□□ -0.43
PPARGC1A-203ENST00000505469 CDK19Q9BWU1 502 aa12.38□□□□□ -0.43
PPARGC1A-203ENST00000505469 EVC2Q86UK5 1308 aa12.37□□□□□ -0.43
PPARGC1A-203ENST00000505469 ATRNO75882 1429 aa12.37□□□□□ -0.43
PPARGC1A-203ENST00000505469 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
PPARGC1A-203ENST00000505469 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
PPARGC1A-203ENST00000505469 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
PPARGC1A-203ENST00000505469 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
PPARGC1A-203ENST00000505469 ATAD2Q6PL18 1390 aa12.37□□□□□ -0.43
PPARGC1A-203ENST00000505469 RBM6P78332 1123 aaKnown RBP12.36□□□□□ -0.43
PPARGC1A-203ENST00000505469 PPIP5K1Q6PFW1 1433 aa12.36□□□□□ -0.43
PPARGC1A-203ENST00000505469 BCL9LQ86UU0 1499 aa12.35□□□□□ -0.43
PPARGC1A-203ENST00000505469 BRWD3Q6RI45 1802 aa12.35□□□□□ -0.43
PPARGC1A-203ENST00000505469 RXRBP28702 533 aa12.35□□□□□ -0.43
PPARGC1A-203ENST00000505469 NGDNQ8NEJ9 315 aaKnown RBP12.35□□□□□ -0.43
PPARGC1A-203ENST00000505469 NGLY1Q96IV0 654 aa12.35□□□□□ -0.43
PPARGC1A-203ENST00000505469 C8orf37Q96NL8 207 aa12.35□□□□□ -0.43
PPARGC1A-203ENST00000505469 TRPC5Q9UL62 973 aaPredicted RBP12.35□□□□□ -0.43
PPARGC1A-203ENST00000505469 NINLQ9Y2I6 1382 aa12.34□□□□□ -0.43
PPARGC1A-203ENST00000505469 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
PPARGC1A-203ENST00000505469 PMFBP1Q8TBY8 1022 aa12.34□□□□□ -0.43
PPARGC1A-203ENST00000505469 PIK3C2AO00443 1686 aa12.34□□□□□ -0.43
PPARGC1A-203ENST00000505469 ABCC6O95255 1503 aa12.33□□□□□ -0.44
PPARGC1A-203ENST00000505469 XPCQ01831 940 aaPredicted RBP12.33□□□□□ -0.44
PPARGC1A-203ENST00000505469 USP6P35125 1406 aa12.33□□□□□ -0.44
PPARGC1A-203ENST00000505469 ACEP12821 1306 aa12.33□□□□□ -0.44
PPARGC1A-203ENST00000505469 LMO7Q8WWI1 1683 aa12.32□□□□□ -0.44
PPARGC1A-203ENST00000505469 GLI3P10071 1580 aa12.32□□□□□ -0.44
PPARGC1A-203ENST00000505469 ADAMTS2O95450 1211 aa12.32□□□□□ -0.44
PPARGC1A-203ENST00000505469 SRPK2P78362 688 aaKnown RBP12.32□□□□□ -0.44
PPARGC1A-203ENST00000505469 CARD11Q9BXL7 1154 aa12.32□□□□□ -0.44
PPARGC1A-203ENST00000505469 QTRT2Q9H974 415 aaKnown RBP12.32□□□□□ -0.44
PPARGC1A-203ENST00000505469 USP21Q9UK80 565 aa12.32□□□□□ -0.44
PPARGC1A-203ENST00000505469 SLIT3O75094 1523 aa12.32□□□□□ -0.44
PPARGC1A-203ENST00000505469 CPSF1Q10570 1443 aaKnown RBP12.31□□□□□ -0.44
PPARGC1A-203ENST00000505469 SSH2Q76I76 1423 aa12.31□□□□□ -0.44
PPARGC1A-203ENST00000505469 ZNF692Q9BU19 519 aaPredicted RBP12.31□□□□□ -0.44
PPARGC1A-203ENST00000505469 CPDO75976 1380 aa12.3□□□□□ -0.44
PPARGC1A-203ENST00000505469 RGS12O14924 1447 aa12.3□□□□□ -0.44
PPARGC1A-203ENST00000505469 UNC5CLQ8IV45 518 aa12.3□□□□□ -0.44
PPARGC1A-203ENST00000505469 USP19O94966 1318 aa12.3□□□□□ -0.44
PPARGC1A-203ENST00000505469 WNK3Q9BYP7 1800 aa12.3□□□□□ -0.44
PPARGC1A-203ENST00000505469 LTN1O94822 1766 aa12.29□□□□□ -0.44
PPARGC1A-203ENST00000505469 COL18A1P39060 1754 aa12.29□□□□□ -0.44
PPARGC1A-203ENST00000505469 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
PPARGC1A-203ENST00000505469 TTC21AQ8NDW8 1320 aa12.28□□□□□ -0.44
PPARGC1A-203ENST00000505469 THSD7AQ9UPZ6 1657 aa12.28□□□□□ -0.44
PPARGC1A-203ENST00000505469 RGPD5Q99666 1765 aa12.28□□□□□ -0.44
PPARGC1A-203ENST00000505469 FAM208AQ9UK61 1670 aaKnown RBP12.27□□□□□ -0.45
PPARGC1A-203ENST00000505469 VPS72Q15906 364 aa12.27□□□□□ -0.45
PPARGC1A-203ENST00000505469 NLRP13Q86W25 1043 aa12.27□□□□□ -0.45
PPARGC1A-203ENST00000505469 CABP2Q9NPB3 220 aa12.27□□□□□ -0.45
PPARGC1A-203ENST00000505469 PARP4Q9UKK3 1724 aaKnown RBP12.26□□□□□ -0.45
PPARGC1A-203ENST00000505469 KIF20BQ96Q89 1820 aa12.26□□□□□ -0.45
PPARGC1A-203ENST00000505469 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
PPARGC1A-203ENST00000505469 GJD4Q96KN9 370 aaPredicted RBP12.26□□□□□ -0.45
PPARGC1A-203ENST00000505469 MYOM1P52179 1685 aa12.26□□□□□ -0.45
PPARGC1A-203ENST00000505469 ONECUT3O60422 494 aaPredicted RBP12.25□□□□□ -0.45
PPARGC1A-203ENST00000505469 PAK3O75914 559 aaPredicted RBP12.25□□□□□ -0.45
PPARGC1A-203ENST00000505469 CABP1Q9NZU7 370 aa12.25□□□□□ -0.45
PPARGC1A-203ENST00000505469 EDC4Q6P2E9 1401 aaKnown RBP12.25□□□□□ -0.45
PPARGC1A-203ENST00000505469 CD163L1Q9NR16 1453 aa12.25□□□□□ -0.45
PPARGC1A-203ENST00000505469 RGPD1P0DJD0 1748 aa12.24□□□□□ -0.45
PPARGC1A-203ENST00000505469 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
PPARGC1A-203ENST00000505469 ABTB2Q8N961 1025 aa12.24□□□□□ -0.45
PPARGC1A-203ENST00000505469 USP47Q96K76 1375 aa12.24□□□□□ -0.45
PPARGC1A-203ENST00000505469 TESK2Q96S53 571 aa12.24□□□□□ -0.45
PPARGC1A-203ENST00000505469 USP31Q70CQ4 1352 aa12.23□□□□□ -0.45
PPARGC1A-203ENST00000505469 CDCA8Q53HL2 280 aa12.23□□□□□ -0.45
PPARGC1A-203ENST00000505469 CABLES1Q8TDN4 633 aa12.23□□□□□ -0.45
PPARGC1A-203ENST00000505469 PCGF6Q9BYE7 350 aa12.23□□□□□ -0.45
PPARGC1A-203ENST00000505469 NFAT5O94916 1531 aa12.22□□□□□ -0.45
PPARGC1A-203ENST00000505469 KTN1Q86UP2 1357 aaKnown RBP12.22□□□□□ -0.45
PPARGC1A-203ENST00000505469 FAM83GA6ND36 823 aa12.22□□□□□ -0.45
PPARGC1A-203ENST00000505469 PRDM11Q9NQV5 511 aa12.22□□□□□ -0.45
PPARGC1A-203ENST00000505469 TERF2IPQ9NYB0 399 aa12.22□□□□□ -0.45
PPARGC1A-203ENST00000505469 ANKRD26Q9UPS8 1709 aa12.22□□□□□ -0.45
PPARGC1A-203ENST00000505469 AATKQ6ZMQ8 1374 aa12.21□□□□□ -0.45
PPARGC1A-203ENST00000505469 KIAA0232Q92628 1395 aa12.21□□□□□ -0.45
PPARGC1A-203ENST00000505469 CCDC125Q86Z20 511 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms