RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 TRIM6-TRIM34B2RNG4 842 aa7.72□□□□□ -1.17
CDH9-203ENST00000505045 MRPL50Q8N5N7 158 aaKnown RBP7.72□□□□□ -1.17
CDH9-203ENST00000505045 NBPF3Q9H094 633 aa7.72□□□□□ -1.17
CDH9-203ENST00000505045 SETD1BQ9UPS6 1966 aaKnown RBP7.72□□□□□ -1.17
CDH9-203ENST00000505045 MAP3K7O43318 606 aa7.71□□□□□ -1.17
CDH9-203ENST00000505045 SUZ12Q15022 739 aaKnown RBP7.71□□□□□ -1.17
CDH9-203ENST00000505045 ZNF142P52746 1687 aaPredicted RBP7.71□□□□□ -1.18
CDH9-203ENST00000505045 MYOM3Q5VTT5 1437 aa7.71□□□□□ -1.18
CDH9-203ENST00000505045 PRKD2Q9BZL6 878 aa7.71□□□□□ -1.18
CDH9-203ENST00000505045 KIAA1468Q9P260 1216 aa7.71□□□□□ -1.18
CDH9-203ENST00000505045 MAST1Q9Y2H9 1570 aa7.7□□□□□ -1.18
CDH9-203ENST00000505045 MROH1Q8NDA8 1641 aa7.7□□□□□ -1.18
CDH9-203ENST00000505045 RTEL1-TNFRSF6BF6WH68 1400 aa7.7□□□□□ -1.18
CDH9-203ENST00000505045 UHRF1BP1Q6BDS2 1440 aa7.7□□□□□ -1.18
CDH9-203ENST00000505045 LAPTM4BQ86VI4 370 aa7.7□□□□□ -1.18
CDH9-203ENST00000505045 TSKSQ9UJT2 592 aa7.7□□□□□ -1.18
CDH9-203ENST00000505045 PTPN23Q9H3S7 1636 aa7.7□□□□□ -1.18
CDH9-203ENST00000505045 CNTLNQ9NXG0 1405 aa7.69□□□□□ -1.18
CDH9-203ENST00000505045 FAM198AQ9UFP1 575 aa7.69□□□□□ -1.18
CDH9-203ENST00000505045 RNF17Q9BXT8 1623 aaKnown RBP7.69□□□□□ -1.18
CDH9-203ENST00000505045 MLLT3P42568 568 aaPredicted RBP7.68□□□□□ -1.18
CDH9-203ENST00000505045 CDHR5Q9HBB8 845 aa7.68□□□□□ -1.18
CDH9-203ENST00000505045 CEP170BQ9Y4F5 1589 aaPredicted RBP7.68□□□□□ -1.18
CDH9-203ENST00000505045 CEP152O94986 1710 aa7.68□□□□□ -1.18
CDH9-203ENST00000505045 CERKQ8TCT0 537 aa7.68□□□□□ -1.18
CDH9-203ENST00000505045 PTPRKQ15262 1439 aa7.68□□□□□ -1.18
CDH9-203ENST00000505045 KDM5DQ9BY66 1539 aa7.68□□□□□ -1.18
CDH9-203ENST00000505045 DNMT1P26358 1616 aaKnown RBP7.67□□□□□ -1.18
CDH9-203ENST00000505045 POTECB2RU33 542 aa7.67□□□□□ -1.18
CDH9-203ENST00000505045 NPDC1Q9NQX5 325 aaPredicted RBP7.67□□□□□ -1.18
CDH9-203ENST00000505045 ZMYM3Q14202 1370 aa7.67□□□□□ -1.18
CDH9-203ENST00000505045 DHX29Q7Z478 1369 aaKnown RBP7.67□□□□□ -1.18
CDH9-203ENST00000505045 MIA2Q96PC5 1412 aa7.67□□□□□ -1.18
CDH9-203ENST00000505045 EIF2AK4Q9P2K8 1649 aaKnown RBP7.67□□□□□ -1.18
CDH9-203ENST00000505045 PRSS12P56730 875 aa7.66□□□□□ -1.18
CDH9-203ENST00000505045 GGT6Q6P531 493 aa7.66□□□□□ -1.18
CDH9-203ENST00000505045 PDZRN3Q9UPQ7 1066 aa7.66□□□□□ -1.18
CDH9-203ENST00000505045 NPATQ14207 1427 aa7.66□□□□□ -1.18
CDH9-203ENST00000505045 CAMSAP1Q5T5Y3 1602 aa7.66□□□□□ -1.18
CDH9-203ENST00000505045 NCOA1Q15788 1441 aa7.66□□□□□ -1.18
CDH9-203ENST00000505045 FGD6Q6ZV73 1430 aa7.66□□□□□ -1.18
CDH9-203ENST00000505045 TTC13Q8NBP0 860 aa7.66□□□□□ -1.18
CDH9-203ENST00000505045 CDCA7LQ96GN5 454 aa7.66□□□□□ -1.18
CDH9-203ENST00000505045 ABCC3O15438 1527 aa7.65□□□□□ -1.18
CDH9-203ENST00000505045 TCOF1Q13428 1488 aaKnown RBP7.65□□□□□ -1.18
CDH9-203ENST00000505045 C3orf80F5H4A9 247 aa7.65□□□□□ -1.18
CDH9-203ENST00000505045 RBM27Q9P2N5 1060 aaKnown RBP7.65□□□□□ -1.18
CDH9-203ENST00000505045 ZC3H13Q5T200 1668 aaKnown RBP7.65□□□□□ -1.19
CDH9-203ENST00000505045 SHANK2Q9UPX8 1470 aa7.65□□□□□ -1.19
CDH9-203ENST00000505045 ABCC5O15440 1437 aa7.64□□□□□ -1.19
CDH9-203ENST00000505045 ZFRQ96KR1 1074 aaKnown RBP7.64□□□□□ -1.19
CDH9-203ENST00000505045 ESF1Q9H501 851 aaKnown RBP7.64□□□□□ -1.19
CDH9-203ENST00000505045 SEPT9Q9UHD8 586 aaPredicted RBP7.64□□□□□ -1.19
CDH9-203ENST00000505045 KDM2AQ9Y2K7 1162 aa7.64□□□□□ -1.19
CDH9-203ENST00000505045 FAM135AQ9P2D6 1515 aa7.64□□□□□ -1.19
CDH9-203ENST00000505045 PZPP20742 1482 aa7.64□□□□□ -1.19
CDH9-203ENST00000505045 DAPK1P53355 1430 aa7.64□□□□□ -1.19
CDH9-203ENST00000505045 POLR1AO95602 1720 aaPredicted RBP7.64□□□□□ -1.19
CDH9-203ENST00000505045 KIF3BO15066 747 aa7.64□□□□□ -1.19
CDH9-203ENST00000505045 FAM98CQ17RN3 349 aaKnown RBP7.64□□□□□ -1.19
CDH9-203ENST00000505045 DEPDC5O75140 1603 aa7.64□□□□□ -1.19
CDH9-203ENST00000505045 CFAP65Q6ZU64 1925 aaKnown RBP7.64□□□□□ -1.19
CDH9-203ENST00000505045 PRDM15P57071 1507 aaPredicted RBP7.63□□□□□ -1.19
CDH9-203ENST00000505045 NEURL4Q96JN8 1562 aa7.63□□□□□ -1.19
CDH9-203ENST00000505045 SOWAHBA6NEL2 793 aa7.63□□□□□ -1.19
CDH9-203ENST00000505045 PACS2Q86VP3 889 aa7.63□□□□□ -1.19
CDH9-203ENST00000505045 ANKK1Q8NFD2 765 aa7.63□□□□□ -1.19
CDH9-203ENST00000505045 DUOX2Q9NRD8 1548 aa7.62□□□□□ -1.19
CDH9-203ENST00000505045 HAP1P54257 671 aaPredicted RBP7.62□□□□□ -1.19
CDH9-203ENST00000505045 LTBP4Q8N2S1 1624 aa7.62□□□□□ -1.19
CDH9-203ENST00000505045 INSM1Q01101 510 aaPredicted RBP7.62□□□□□ -1.19
CDH9-203ENST00000505045 FBXO31Q5XUX0 539 aaPredicted RBP7.62□□□□□ -1.19
CDH9-203ENST00000505045 V9GY48 417 aaPredicted RBP7.62□□□□□ -1.19
CDH9-203ENST00000505045 SPATA31D1Q6ZQQ2 1576 aa7.61□□□□□ -1.19
CDH9-203ENST00000505045 KIF15Q9NS87 1388 aa7.61□□□□□ -1.19
CDH9-203ENST00000505045 A2ML1A8K2U0 1454 aa7.61□□□□□ -1.19
CDH9-203ENST00000505045 PLA2R1Q13018 1463 aa7.61□□□□□ -1.19
CDH9-203ENST00000505045 SEMA3EO15041 775 aa7.61□□□□□ -1.19
CDH9-203ENST00000505045 BCAMP50895 628 aa7.61□□□□□ -1.19
CDH9-203ENST00000505045 RSPH4AQ5TD94 716 aa7.61□□□□□ -1.19
CDH9-203ENST00000505045 PTPRTO14522 1441 aa7.6□□□□□ -1.19
CDH9-203ENST00000505045 TSPY4P0CV99 314 aa7.6□□□□□ -1.19
CDH9-203ENST00000505045 TSPY10P0CW01 314 aa7.6□□□□□ -1.19
CDH9-203ENST00000505045 NYAP1Q6ZVC0 841 aa7.6□□□□□ -1.19
CDH9-203ENST00000505045 ERVK-7P63135 1459 aa7.6□□□□□ -1.19
CDH9-203ENST00000505045 ERBINQ96RT1 1412 aa7.59□□□□□ -1.19
CDH9-203ENST00000505045 FBXO41Q8TF61 875 aa7.59□□□□□ -1.19
CDH9-203ENST00000505045 TATDN2Q93075 761 aa7.59□□□□□ -1.19
CDH9-203ENST00000505045 TNRQ92752 1358 aa7.59□□□□□ -1.19
CDH9-203ENST00000505045 UBR1Q8IWV7 1749 aa7.59□□□□□ -1.19
CDH9-203ENST00000505045 TESPA1A2RU30 521 aaPredicted RBP7.59□□□□□ -1.19
CDH9-203ENST00000505045 SMAPO00193 183 aa7.59□□□□□ -1.19
CDH9-203ENST00000505045 ADGRL2O95490 1459 aa7.58□□□□□ -1.2
CDH9-203ENST00000505045 VWDEQ8N2E2 1590 aa7.58□□□□□ -1.2
CDH9-203ENST00000505045 WASHC2CQ9Y4E1 1318 aa7.58□□□□□ -1.2
CDH9-203ENST00000505045 PADI6Q6TGC4 694 aa7.58□□□□□ -1.2
CDH9-203ENST00000505045 UGGT1Q9NYU2 1555 aa7.58□□□□□ -1.2
CDH9-203ENST00000505045 NBPF26B4DH59 902 aa7.57□□□□□ -1.2
CDH9-203ENST00000505045 PTGDRQ13258 359 aa7.57□□□□□ -1.2
CDH9-203ENST00000505045 RRP7BPQ9NSQ0 103 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms