RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 PPIP5K1Q6PFW1 1433 aa28.43■■■□□ 2.14
HERC6-205ENST00000504905 PLEKHG3A1L390 1219 aa28.4■■■□□ 2.14
HERC6-205ENST00000504905 GJD4Q96KN9 370 aaPredicted RBP28.4■■■□□ 2.14
HERC6-205ENST00000504905 ZRANB1Q9UGI0 708 aa28.4■■■□□ 2.14
HERC6-205ENST00000504905 SPATA31A3Q5VYP0 1347 aa28.4■■■□□ 2.14
HERC6-205ENST00000504905 SBNO1A3KN83 1393 aa28.39■■■□□ 2.14
HERC6-205ENST00000504905 SLC24A1O60721 1099 aa28.39■■■□□ 2.14
HERC6-205ENST00000504905 TNS3Q68CZ2 1445 aa28.39■■■□□ 2.14
HERC6-205ENST00000504905 TESK2Q96S53 571 aa28.39■■■□□ 2.14
HERC6-205ENST00000504905 TRPM3Q9HCF6 1732 aaPredicted RBP28.39■■■□□ 2.14
HERC6-205ENST00000504905 POLR3AO14802 1390 aaPredicted RBP28.38■■■□□ 2.13
HERC6-205ENST00000504905 ACEP12821 1306 aa28.38■■■□□ 2.13
HERC6-205ENST00000504905 CABP1Q9NZU7 370 aa28.36■■■□□ 2.13
HERC6-205ENST00000504905 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.35■■■□□ 2.13
HERC6-205ENST00000504905 LMOD2Q6P5Q4 547 aa28.34■■■□□ 2.13
HERC6-205ENST00000504905 UNC5CLQ8IV45 518 aa28.32■■■□□ 2.12
HERC6-205ENST00000504905 ARHGEF10O15013 1369 aa28.32■■■□□ 2.12
HERC6-205ENST00000504905 SLIT2O94813 1529 aa28.32■■■□□ 2.12
HERC6-205ENST00000504905 ALS2Q96Q42 1657 aa28.32■■■□□ 2.12
HERC6-205ENST00000504905 PAK3O75914 559 aaPredicted RBP28.31■■■□□ 2.12
HERC6-205ENST00000504905 TMF1P82094 1093 aa28.3■■■□□ 2.12
HERC6-205ENST00000504905 PUS7Q96PZ0 661 aaKnown RBP28.3■■■□□ 2.12
HERC6-205ENST00000504905 EIF4G2P78344 907 aaKnown RBP eCLIP28.29■■■□□ 2.12
HERC6-205ENST00000504905 GLI3P10071 1580 aa28.28■■■□□ 2.12
HERC6-205ENST00000504905 AKAP12Q02952 1782 aa28.27■■■□□ 2.12
HERC6-205ENST00000504905 TMC1Q8TDI8 760 aa28.26■■■□□ 2.11
HERC6-205ENST00000504905 BLMP54132 1417 aaPredicted RBP28.25■■■□□ 2.11
HERC6-205ENST00000504905 USP6P35125 1406 aa28.24■■■□□ 2.11
HERC6-205ENST00000504905 BRD4O60885 1362 aaPredicted RBP28.24■■■□□ 2.11
HERC6-205ENST00000504905 PLEKHG5O94827 1062 aa28.23■■■□□ 2.11
HERC6-205ENST00000504905 HSPA5P11021 654 aaKnown RBP28.23■■■□□ 2.11
HERC6-205ENST00000504905 ABCA3Q99758 1704 aa28.23■■■□□ 2.11
HERC6-205ENST00000504905 HAP1P54257 671 aaPredicted RBP28.22■■■□□ 2.11
HERC6-205ENST00000504905 CDCA8Q53HL2 280 aa28.22■■■□□ 2.11
HERC6-205ENST00000504905 ZNF692Q9BU19 519 aaPredicted RBP28.22■■■□□ 2.11
HERC6-205ENST00000504905 CPSF1Q10570 1443 aaKnown RBP28.2■■■□□ 2.11
HERC6-205ENST00000504905 CABLES1Q8TDN4 633 aa28.2■■■□□ 2.1
HERC6-205ENST00000504905 SLC12A5Q9H2X9 1139 aa28.2■■■□□ 2.1
HERC6-205ENST00000504905 NINLQ9Y2I6 1382 aa28.2■■■□□ 2.1
HERC6-205ENST00000504905 MON2Q7Z3U7 1717 aa28.19■■■□□ 2.1
HERC6-205ENST00000504905 BRWD3Q6RI45 1802 aa28.18■■■□□ 2.1
HERC6-205ENST00000504905 VPS72Q15906 364 aa28.18■■■□□ 2.1
HERC6-205ENST00000504905 ABTB2Q8N961 1025 aa28.18■■■□□ 2.1
HERC6-205ENST00000504905 KTN1Q86UP2 1357 aaKnown RBP28.18■■■□□ 2.1
HERC6-205ENST00000504905 HDGFL2Q7Z4V5 671 aaPredicted RBP28.17■■■□□ 2.1
HERC6-205ENST00000504905 CRYBG1Q9Y4K1 1723 aa28.17■■■□□ 2.1
HERC6-205ENST00000504905 CD163L1Q9NR16 1453 aa28.16■■■□□ 2.1
HERC6-205ENST00000504905 ONECUT3O60422 494 aaPredicted RBP28.16■■■□□ 2.1
HERC6-205ENST00000504905 NUTM2GQ5VZR2 741 aa28.16■■■□□ 2.1
HERC6-205ENST00000504905 SEPT12Q8IYM1 358 aa28.16■■■□□ 2.1
HERC6-205ENST00000504905 TERF2IPQ9NYB0 399 aa28.16■■■□□ 2.1
HERC6-205ENST00000504905 SSH2Q76I76 1423 aa28.16■■■□□ 2.1
HERC6-205ENST00000504905 NRKQ7Z2Y5 1582 aa28.16■■■□□ 2.1
HERC6-205ENST00000504905 NWD2Q9ULI1 1742 aa28.15■■■□□ 2.1
HERC6-205ENST00000504905 PHRF1Q9P1Y6 1649 aaKnown RBP28.12■■■□□ 2.09
HERC6-205ENST00000504905 DEFB132Q7Z7B7 95 aa28.12■■■□□ 2.09
HERC6-205ENST00000504905 PLCH1Q4KWH8 1693 aa28.12■■■□□ 2.09
HERC6-205ENST00000504905 TTC21BQ7Z4L5 1316 aa28.12■■■□□ 2.09
HERC6-205ENST00000504905 A0A1W2PP64 1363 aa28.11■■■□□ 2.09
HERC6-205ENST00000504905 PIK3C2AO00443 1686 aa28.11■■■□□ 2.09
HERC6-205ENST00000504905 SF3B2Q13435 895 aaKnown RBP28.11■■■□□ 2.09
HERC6-205ENST00000504905 TTC21AQ8NDW8 1320 aa28.11■■■□□ 2.09
HERC6-205ENST00000504905 NLRP13Q86W25 1043 aa28.1■■■□□ 2.09
HERC6-205ENST00000504905 MYOM1P52179 1685 aa28.08■■■□□ 2.09
HERC6-205ENST00000504905 EDC4Q6P2E9 1401 aaKnown RBP28.08■■■□□ 2.09
HERC6-205ENST00000504905 NLRP6P59044 892 aa28.07■■■□□ 2.08
HERC6-205ENST00000504905 KRT27Q7Z3Y8 459 aa28.07■■■□□ 2.08
HERC6-205ENST00000504905 POLR3GLQ9BT43 218 aa28.07■■■□□ 2.08
HERC6-205ENST00000504905 CCDC9Q9Y3X0 531 aaKnown RBP28.07■■■□□ 2.08
HERC6-205ENST00000504905 ANKRD36BQ8N2N9 1353 aa28.07■■■□□ 2.08
HERC6-205ENST00000504905 FAM83GA6ND36 823 aa28.06■■■□□ 2.08
HERC6-205ENST00000504905 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.06■■■□□ 2.08
HERC6-205ENST00000504905 USP19O94966 1318 aa28.06■■■□□ 2.08
HERC6-205ENST00000504905 COL14A1Q05707 1796 aaKnown RBP28.01■■■□□ 2.08
HERC6-205ENST00000504905 SLIT3O75094 1523 aa28■■■□□ 2.07
HERC6-205ENST00000504905 LRP5O75197 1615 aa28■■■□□ 2.07
HERC6-205ENST00000504905 GCP02774 474 aa27.99■■■□□ 2.07
HERC6-205ENST00000504905 ZC3H6P61129 1189 aaKnown RBP27.99■■■□□ 2.07
HERC6-205ENST00000504905 NME9Q86XW9 330 aa27.99■■■□□ 2.07
HERC6-205ENST00000504905 PRDM11Q9NQV5 511 aa27.99■■■□□ 2.07
HERC6-205ENST00000504905 KIAA0232Q92628 1395 aa27.99■■■□□ 2.07
HERC6-205ENST00000504905 NRAPQ86VF7 1730 aa27.98■■■□□ 2.07
HERC6-205ENST00000504905 USP54Q70EL1 1684 aa27.98■■■□□ 2.07
HERC6-205ENST00000504905 C11orf95C9JLR9 678 aaPredicted RBP27.97■■■□□ 2.07
HERC6-205ENST00000504905 BAG6P46379 1132 aa27.96■■■□□ 2.07
HERC6-205ENST00000504905 BTG4Q9NY30 223 aa27.96■■■□□ 2.07
HERC6-205ENST00000504905 USP31Q70CQ4 1352 aa27.96■■■□□ 2.07
HERC6-205ENST00000504905 FAM98CQ17RN3 349 aaKnown RBP27.95■■■□□ 2.06
HERC6-205ENST00000504905 A0A0G2JS52 829 aa27.94■■■□□ 2.06
HERC6-205ENST00000504905 MYT1Q01538 1121 aa27.94■■■□□ 2.06
HERC6-205ENST00000504905 CPDO75976 1380 aa27.94■■■□□ 2.06
HERC6-205ENST00000504905 CHRNA2Q15822 529 aa27.93■■■□□ 2.06
HERC6-205ENST00000504905 KCNH5Q8NCM2 988 aa27.93■■■□□ 2.06
HERC6-205ENST00000504905 KIF20BQ96Q89 1820 aa27.91■■■□□ 2.06
HERC6-205ENST00000504905 SOX12O15370 315 aa27.91■■■□□ 2.06
HERC6-205ENST00000504905 KIF7Q2M1P5 1343 aa27.91■■■□□ 2.06
HERC6-205ENST00000504905 NSD3Q9BZ95 1437 aa27.9■■■□□ 2.06
HERC6-205ENST00000504905 ZBTB7CA1YPR0 619 aa27.89■■■□□ 2.06
HERC6-205ENST00000504905 CARD14Q9BXL6 1004 aa27.89■■■□□ 2.06
HERC6-205ENST00000504905 OVOS2A0A0J9YW53 1432 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms