RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 USP6P35125 1406 aa18.36■□□□□ 0.53
PDLIM7-212ENST00000504380 NINLQ9Y2I6 1382 aa18.36■□□□□ 0.53
PDLIM7-212ENST00000504380 TRPM3Q9HCF6 1732 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-212ENST00000504380 NUTM2GQ5VZR2 741 aa18.35■□□□□ 0.53
PDLIM7-212ENST00000504380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
PDLIM7-212ENST00000504380 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-212ENST00000504380 CARD14Q9BXL6 1004 aa18.35■□□□□ 0.53
PDLIM7-212ENST00000504380 PANK3Q9H999 370 aa18.35■□□□□ 0.53
PDLIM7-212ENST00000504380 ANKRD36BQ8N2N9 1353 aa18.34■□□□□ 0.53
PDLIM7-212ENST00000504380 SPATA31A3Q5VYP0 1347 aa18.34■□□□□ 0.53
PDLIM7-212ENST00000504380 ZNF316A6NFI3 1004 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-212ENST00000504380 LRRC59Q96AG4 307 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-212ENST00000504380 TTC21BQ7Z4L5 1316 aa18.33■□□□□ 0.53
PDLIM7-212ENST00000504380 MON2Q7Z3U7 1717 aa18.33■□□□□ 0.52
PDLIM7-212ENST00000504380 SSH2Q76I76 1423 aa18.32■□□□□ 0.52
PDLIM7-212ENST00000504380 SBNO1A3KN83 1393 aa18.32■□□□□ 0.52
PDLIM7-212ENST00000504380 ZRANB1Q9UGI0 708 aa18.32■□□□□ 0.52
PDLIM7-212ENST00000504380 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
PDLIM7-212ENST00000504380 NME9Q86XW9 330 aa18.3■□□□□ 0.52
PDLIM7-212ENST00000504380 ABTB2Q8N961 1025 aa18.3■□□□□ 0.52
PDLIM7-212ENST00000504380 NRKQ7Z2Y5 1582 aa18.3■□□□□ 0.52
PDLIM7-212ENST00000504380 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
PDLIM7-212ENST00000504380 ALS2Q96Q42 1657 aa18.29■□□□□ 0.52
PDLIM7-212ENST00000504380 CABLES1Q8TDN4 633 aa18.29■□□□□ 0.52
PDLIM7-212ENST00000504380 EDC4Q6P2E9 1401 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-212ENST00000504380 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
PDLIM7-212ENST00000504380 DDX10Q13206 875 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-212ENST00000504380 UPF1Q92900 1129 aaKnown RBP eCLIP18.28■□□□□ 0.52
PDLIM7-212ENST00000504380 JCADQ9P266 1359 aa18.28■□□□□ 0.52
PDLIM7-212ENST00000504380 NUTM2BA6NNL0 878 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-212ENST00000504380 NUTM2EB1AL46 878 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-212ENST00000504380 NUTM2AQ8IVF1 878 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-212ENST00000504380 PIK3C2AO00443 1686 aa18.26■□□□□ 0.51
PDLIM7-212ENST00000504380 NLRP6P59044 892 aa18.26■□□□□ 0.51
PDLIM7-212ENST00000504380 TTC21AQ8NDW8 1320 aa18.25■□□□□ 0.51
PDLIM7-212ENST00000504380 CNGB1Q14028 1251 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-212ENST00000504380 ARHGEF10O15013 1369 aa18.25■□□□□ 0.51
PDLIM7-212ENST00000504380 BRD4O60885 1362 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-212ENST00000504380 SHPRHQ149N8 1683 aa18.25■□□□□ 0.51
PDLIM7-212ENST00000504380 GGNBP2Q9H3C7 697 aa18.24■□□□□ 0.51
PDLIM7-212ENST00000504380 FYB1O15117 783 aa18.23■□□□□ 0.51
PDLIM7-212ENST00000504380 SOX12O15370 315 aa18.22■□□□□ 0.51
PDLIM7-212ENST00000504380 PER1O15534 1290 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-212ENST00000504380 NLRP13Q86W25 1043 aa18.22■□□□□ 0.51
PDLIM7-212ENST00000504380 KNSTRNQ9Y448 316 aa18.22■□□□□ 0.51
PDLIM7-212ENST00000504380 COL22A1Q8NFW1 1626 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-212ENST00000504380 HAP1P54257 671 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-212ENST00000504380 MARF1Q9Y4F3 1742 aaKnown RBP18.2■□□□□ 0.5
PDLIM7-212ENST00000504380 ADAMTS2O95450 1211 aa18.2■□□□□ 0.5
PDLIM7-212ENST00000504380 KIF20BQ96Q89 1820 aa18.2■□□□□ 0.5
PDLIM7-212ENST00000504380 FBLN1P23142 703 aa18.19■□□□□ 0.5
PDLIM7-212ENST00000504380 LRP6O75581 1613 aa18.19■□□□□ 0.5
PDLIM7-212ENST00000504380 USP19O94966 1318 aa18.19■□□□□ 0.5
PDLIM7-212ENST00000504380 CGNL1Q0VF96 1302 aa18.19■□□□□ 0.5
PDLIM7-212ENST00000504380 USP31Q70CQ4 1352 aa18.18■□□□□ 0.5
PDLIM7-212ENST00000504380 ABCA3Q99758 1704 aa18.18■□□□□ 0.5
PDLIM7-212ENST00000504380 CRYBG1Q9Y4K1 1723 aa18.18■□□□□ 0.5
PDLIM7-212ENST00000504380 COG3Q96JB2 828 aa18.18■□□□□ 0.5
PDLIM7-212ENST00000504380 SPATA31A6Q5VVP1 1343 aa18.18■□□□□ 0.5
PDLIM7-212ENST00000504380 PHRF1Q9P1Y6 1649 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-212ENST00000504380 ZBTB7CA1YPR0 619 aa18.17■□□□□ 0.5
PDLIM7-212ENST00000504380 GCP02774 474 aa18.17■□□□□ 0.5
PDLIM7-212ENST00000504380 ZC3H6P61129 1189 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-212ENST00000504380 AMER1Q5JTC6 1135 aaPredicted RBP18.17■□□□□ 0.5
PDLIM7-212ENST00000504380 CC2D1BQ5T0F9 858 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-212ENST00000504380 ZNF772Q68DY9 489 aaPredicted RBP18.17■□□□□ 0.5
PDLIM7-212ENST00000504380 OVOS2A0A0J9YW53 1432 aa18.16■□□□□ 0.5
PDLIM7-212ENST00000504380 OVOS2Q6IE36 1432 aa18.16■□□□□ 0.5
PDLIM7-212ENST00000504380 TNNT2P45379 298 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-212ENST00000504380 SLIT3O75094 1523 aa18.14■□□□□ 0.49
PDLIM7-212ENST00000504380 MEX3CQ5U5Q3 659 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-212ENST00000504380 USP54Q70EL1 1684 aa18.13■□□□□ 0.49
PDLIM7-212ENST00000504380 CHRNA2Q15822 529 aa18.13■□□□□ 0.49
PDLIM7-212ENST00000504380 MORC1Q86VD1 984 aa18.12■□□□□ 0.49
PDLIM7-212ENST00000504380 FAM83GA6ND36 823 aa18.11■□□□□ 0.49
PDLIM7-212ENST00000504380 KCNH5Q8NCM2 988 aa18.11■□□□□ 0.49
PDLIM7-212ENST00000504380 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
PDLIM7-212ENST00000504380 KIAA0232Q92628 1395 aa18.11■□□□□ 0.49
PDLIM7-212ENST00000504380 ANKRD26Q9UPS8 1709 aa18.11■□□□□ 0.49
PDLIM7-212ENST00000504380 NFAT5O94916 1531 aa18.1■□□□□ 0.49
PDLIM7-212ENST00000504380 RRS1Q15050 365 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-212ENST00000504380 RXRBP28702 533 aa18.09■□□□□ 0.49
PDLIM7-212ENST00000504380 PRDM11Q9NQV5 511 aa18.09■□□□□ 0.49
PDLIM7-212ENST00000504380 CDK12Q9NYV4 1490 aaPredicted RBP18.08■□□□□ 0.49
PDLIM7-212ENST00000504380 NSD2O96028 1365 aa18.08■□□□□ 0.49
PDLIM7-212ENST00000504380 NGLY1Q96IV0 654 aa18.08■□□□□ 0.48
PDLIM7-212ENST00000504380 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
PDLIM7-212ENST00000504380 NPC1L1Q9UHC9 1359 aa18.06■□□□□ 0.48
PDLIM7-212ENST00000504380 MAP3K19Q56UN5 1328 aa18.06■□□□□ 0.48
PDLIM7-212ENST00000504380 EMILIN1Q9Y6C2 1016 aa18.06■□□□□ 0.48
PDLIM7-212ENST00000504380 SRCAPQ6ZRS2 3230 aa18.05■□□□□ 0.48
PDLIM7-212ENST00000504380 CPDO75976 1380 aa18.04■□□□□ 0.48
PDLIM7-212ENST00000504380 LTN1O94822 1766 aa18.04■□□□□ 0.48
PDLIM7-212ENST00000504380 AFF2P51816 1311 aa18.04■□□□□ 0.48
PDLIM7-212ENST00000504380 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-212ENST00000504380 AXIN2Q9Y2T1 843 aa18.04■□□□□ 0.48
PDLIM7-212ENST00000504380 MAP2P11137 1827 aaKnown RBP18.03■□□□□ 0.48
PDLIM7-212ENST00000504380 AMPHP49418 695 aa18.03■□□□□ 0.48
PDLIM7-212ENST00000504380 BTG4Q9NY30 223 aa18.03■□□□□ 0.48
PDLIM7-212ENST00000504380 POLKQ9UBT6 870 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms