RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 CDC42BPGQ6DT37 1551 aa16.86■□□□□ 0.29
MATR3-233ENST00000504203 CPSF1Q10570 1443 aaKnown RBP16.85■□□□□ 0.29
MATR3-233ENST00000504203 ZBTB47Q9UFB7 747 aaPredicted RBP16.85■□□□□ 0.29
MATR3-233ENST00000504203 DIAPH1O60610 1272 aaKnown RBP16.85■□□□□ 0.29
MATR3-233ENST00000504203 CANXP27824 592 aaKnown RBP16.85■□□□□ 0.29
MATR3-233ENST00000504203 CLUAP1Q96AJ1 413 aa16.85■□□□□ 0.29
MATR3-233ENST00000504203 SIRT1Q96EB6 747 aa16.85■□□□□ 0.29
MATR3-233ENST00000504203 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
MATR3-233ENST00000504203 TRIM35Q9UPQ4 493 aa16.85■□□□□ 0.29
MATR3-233ENST00000504203 COG6Q9Y2V7 657 aa16.85■□□□□ 0.29
MATR3-233ENST00000504203 FAM135BQ49AJ0 1406 aa16.84■□□□□ 0.29
MATR3-233ENST00000504203 WASLO00401 505 aaPredicted RBP16.84■□□□□ 0.29
MATR3-233ENST00000504203 TNRQ92752 1358 aa16.84■□□□□ 0.29
MATR3-233ENST00000504203 IGHDP01880 384 aa16.84■□□□□ 0.29
MATR3-233ENST00000504203 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
MATR3-233ENST00000504203 FRAT1Q92837 279 aaPredicted RBP16.84■□□□□ 0.29
MATR3-233ENST00000504203 CT47B1P0C2W7 299 aaPredicted RBP16.83■□□□□ 0.28
MATR3-233ENST00000504203 AAMPQ13685 434 aa16.82■□□□□ 0.28
MATR3-233ENST00000504203 EDC4Q6P2E9 1401 aaKnown RBP16.82■□□□□ 0.28
MATR3-233ENST00000504203 CPS1P31327 1500 aa16.82■□□□□ 0.28
MATR3-233ENST00000504203 RLBP1P12271 317 aa16.82■□□□□ 0.28
MATR3-233ENST00000504203 POLKQ9UBT6 870 aa16.82■□□□□ 0.28
MATR3-233ENST00000504203 IL16Q14005 1332 aa16.82■□□□□ 0.28
MATR3-233ENST00000504203 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
MATR3-233ENST00000504203 PPIP5K1Q6PFW1 1433 aa16.82■□□□□ 0.28
MATR3-233ENST00000504203 UBR1Q8IWV7 1749 aa16.81■□□□□ 0.28
MATR3-233ENST00000504203 HDGFP51858 240 aaKnown RBP16.81■□□□□ 0.28
MATR3-233ENST00000504203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.81■□□□□ 0.284e-7■■■□□ 14.8
MATR3-233ENST00000504203 C8orf34Q49A92 452 aa16.81■□□□□ 0.28
MATR3-233ENST00000504203 TXNDC2Q86VQ3 553 aa16.81■□□□□ 0.28
MATR3-233ENST00000504203 PNNQ9H307 717 aaKnown RBP16.81■□□□□ 0.28
MATR3-233ENST00000504203 TNNQ9UQP3 1299 aa16.81■□□□□ 0.28
MATR3-233ENST00000504203 TMEM2Q9UHN6 1383 aa16.81■□□□□ 0.28
MATR3-233ENST00000504203 FAM161AQ3B820 660 aa16.8■□□□□ 0.28
MATR3-233ENST00000504203 BCL2L13Q9BXK5 485 aa16.8■□□□□ 0.28
MATR3-233ENST00000504203 FCHSD2O94868 740 aa16.8■□□□□ 0.28
MATR3-233ENST00000504203 TSR2Q969E8 191 aaKnown RBP16.8■□□□□ 0.28
MATR3-233ENST00000504203 MAP2P11137 1827 aaKnown RBP16.79■□□□□ 0.28
MATR3-233ENST00000504203 LRRC7Q96NW7 1537 aa16.79■□□□□ 0.28
MATR3-233ENST00000504203 FBLN1P23142 703 aa16.78■□□□□ 0.28
MATR3-233ENST00000504203 RIPK4P57078 832 aa16.78■□□□□ 0.28
MATR3-233ENST00000504203 NUDT16Q96DE0 195 aaKnown RBP16.78■□□□□ 0.28
MATR3-233ENST00000504203 MON2Q7Z3U7 1717 aa16.78■□□□□ 0.28
MATR3-233ENST00000504203 RGS3P49796 1198 aa16.77■□□□□ 0.28
MATR3-233ENST00000504203 EXOSC9Q06265 439 aaKnown RBP16.77■□□□□ 0.28
MATR3-233ENST00000504203 RSPH6AQ9H0K4 717 aa16.77■□□□□ 0.28
MATR3-233ENST00000504203 ADAMTS13Q76LX8 1427 aa16.77■□□□□ 0.28
MATR3-233ENST00000504203 CCDC61Q9Y6R9 512 aa16.77■□□□□ 0.27
MATR3-233ENST00000504203 AATKQ6ZMQ8 1374 aa16.76■□□□□ 0.27
MATR3-233ENST00000504203 AKAP12Q02952 1782 aa16.76■□□□□ 0.27
MATR3-233ENST00000504203 NME9Q86XW9 330 aa16.76■□□□□ 0.27
MATR3-233ENST00000504203 PCDHB15Q9Y5E8 787 aa16.76■□□□□ 0.27
MATR3-233ENST00000504203 ZKSCAN2Q63HK3 967 aa16.75■□□□□ 0.27
MATR3-233ENST00000504203 CDK12Q9NYV4 1490 aaPredicted RBP16.75■□□□□ 0.27
MATR3-233ENST00000504203 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
MATR3-233ENST00000504203 C3P01024 1663 aa16.74■□□□□ 0.27
MATR3-233ENST00000504203 NCKAP5LQ9HCH0 1330 aa16.74■□□□□ 0.27
MATR3-233ENST00000504203 MVPQ14764 893 aaKnown RBP16.74■□□□□ 0.27
MATR3-233ENST00000504203 ROBO2Q9HCK4 1378 aa16.74■□□□□ 0.27
MATR3-233ENST00000504203 PRR36Q9H6K5 1346 aa16.74■□□□□ 0.27
MATR3-233ENST00000504203 PRKAR2BP31323 418 aa16.73■□□□□ 0.27
MATR3-233ENST00000504203 EMILIN1Q9Y6C2 1016 aa16.73■□□□□ 0.27
MATR3-233ENST00000504203 PLEKHG1Q9ULL1 1385 aa16.73■□□□□ 0.27
MATR3-233ENST00000504203 PPM1GO15355 546 aaPredicted RBP16.73■□□□□ 0.27
MATR3-233ENST00000504203 IL13P35225 146 aa16.73■□□□□ 0.27
MATR3-233ENST00000504203 SSH1Q8WYL5 1049 aa16.73■□□□□ 0.27
MATR3-233ENST00000504203 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
MATR3-233ENST00000504203 ITSN1Q15811 1721 aa16.72■□□□□ 0.27
MATR3-233ENST00000504203 DZIP1LQ8IYY4 767 aaKnown RBP16.72■□□□□ 0.27
MATR3-233ENST00000504203 DDRGK1Q96HY6 314 aa16.72■□□□□ 0.27
MATR3-233ENST00000504203 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
MATR3-233ENST00000504203 VIRMAQ69YN4 1812 aaKnown RBP16.71■□□□□ 0.27
MATR3-233ENST00000504203 LTKP29376 864 aa16.71■□□□□ 0.27
MATR3-233ENST00000504203 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
MATR3-233ENST00000504203 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.71■□□□□ 0.27
MATR3-233ENST00000504203 PHACTR3Q96KR7 559 aa16.7■□□□□ 0.26
MATR3-233ENST00000504203 TRIM27P14373 513 aa16.7■□□□□ 0.26
MATR3-233ENST00000504203 NFE2L2Q16236 605 aa16.7■□□□□ 0.26
MATR3-233ENST00000504203 COG3Q96JB2 828 aa16.7■□□□□ 0.26
MATR3-233ENST00000504203 HMOX1P09601 288 aa16.69■□□□□ 0.26
MATR3-233ENST00000504203 FTSJ3Q8IY81 847 aaKnown RBP16.69■□□□□ 0.26
MATR3-233ENST00000504203 TOPAZ1Q8N9V7 1692 aa16.68■□□□□ 0.26
MATR3-233ENST00000504203 NBR1Q14596 966 aa16.68■□□□□ 0.26
MATR3-233ENST00000504203 ATF7IPQ6VMQ6 1270 aa16.68■□□□□ 0.26
MATR3-233ENST00000504203 NRKQ7Z2Y5 1582 aa16.68■□□□□ 0.26
MATR3-233ENST00000504203 NEFMP07197 916 aa16.68■□□□□ 0.26
MATR3-233ENST00000504203 RWDD1Q9H446 243 aaPredicted RBP16.68■□□□□ 0.26
MATR3-233ENST00000504203 ALDH1L2Q3SY69 923 aa16.67■□□□□ 0.26
MATR3-233ENST00000504203 NOB1Q9ULX3 412 aaKnown RBP16.66■□□□□ 0.26
MATR3-233ENST00000504203 PTPRUQ92729 1446 aa16.66■□□□□ 0.26
MATR3-233ENST00000504203 SLIT1O75093 1534 aa16.65■□□□□ 0.26
MATR3-233ENST00000504203 ARHGAP23Q9P227 1491 aa16.65■□□□□ 0.26
MATR3-233ENST00000504203 KIF16BQ96L93 1317 aa16.65■□□□□ 0.26
MATR3-233ENST00000504203 PLEKHG3A1L390 1219 aa16.65■□□□□ 0.26
MATR3-233ENST00000504203 CEBPAP49715 358 aaPredicted RBP16.65■□□□□ 0.26
MATR3-233ENST00000504203 BRPF1P55201 1214 aaPredicted RBP16.65■□□□□ 0.26
MATR3-233ENST00000504203 RRS1Q15050 365 aaKnown RBP16.65■□□□□ 0.26
MATR3-233ENST00000504203 ZNF428Q96B54 188 aa16.65■□□□□ 0.26
MATR3-233ENST00000504203 DDX19BQ9UMR2 479 aa16.65■□□□□ 0.26
MATR3-233ENST00000504203 PDZRN3Q9UPQ7 1066 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms