RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 PNMA3Q9UL41 463 aa8.25□□□□□ -1.09
GYPA-203ENST00000503627 FAM196BA6NMK8 535 aa8.24□□□□□ -1.09
GYPA-203ENST00000503627 MARSP56192 900 aaKnown RBP8.24□□□□□ -1.09
GYPA-203ENST00000503627 PLEKHM2Q8IWE5 1019 aa8.24□□□□□ -1.09
GYPA-203ENST00000503627 USP17L15C9J2P7 530 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 USP17L10C9JJH3 530 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 USP17L13C9JLJ4 530 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 USP17L12C9JPN9 530 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 USP17L11C9JVI0 530 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 USP17L21D6R901 530 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 USP17L18D6R9N7 530 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 USP17L22D6RA61 530 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 USP17L17D6RBQ6 530 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 USP17L19D6RCP7 530 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 USP17L20D6RJB6 530 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 USP17L24Q0WX57 530 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 CRTC2Q53ET0 693 aaPredicted RBP8.23□□□□□ -1.09
GYPA-203ENST00000503627 PNMA1Q8ND90 353 aa8.23□□□□□ -1.09
GYPA-203ENST00000503627 CLP1Q92989 425 aaKnown RBP8.23□□□□□ -1.09
GYPA-203ENST00000503627 USP17L5A8MUK1 530 aa8.22□□□□□ -1.09
GYPA-203ENST00000503627 VAMP1P23763 118 aa8.22□□□□□ -1.09
GYPA-203ENST00000503627 LSM11P83369 360 aaKnown RBP eCLIP8.22□□□□□ -1.09
GYPA-203ENST00000503627 NR1H3Q13133 447 aa8.22□□□□□ -1.09
GYPA-203ENST00000503627 SREK1Q8WXA9 508 aaKnown RBP8.22□□□□□ -1.09
GYPA-203ENST00000503627 DRC1Q96MC2 740 aa8.22□□□□□ -1.09
GYPA-203ENST00000503627 ANKRD33BA6NCL7 494 aa8.21□□□□□ -1.1
GYPA-203ENST00000503627 PER1O15534 1290 aaPredicted RBP8.21□□□□□ -1.1
GYPA-203ENST00000503627 SLC10A3P09131 477 aa8.21□□□□□ -1.1
GYPA-203ENST00000503627 KHSRPQ92945 711 aaKnown RBP eCLIP8.21□□□□□ -1.11e-7■□□□□ 8.2
GYPA-203ENST00000503627 C6orf229H3BNL8 230 aa8.2□□□□□ -1.1
GYPA-203ENST00000503627 SKIP12755 728 aa8.2□□□□□ -1.1
GYPA-203ENST00000503627 PTK7Q13308 1070 aa8.2□□□□□ -1.1
GYPA-203ENST00000503627 TRIM6-TRIM34B2RNG4 842 aa8.19□□□□□ -1.1
GYPA-203ENST00000503627 PPP1R3GB7ZBB8 358 aa8.19□□□□□ -1.1
GYPA-203ENST00000503627 NUDT7P0C024 238 aa8.19□□□□□ -1.1
GYPA-203ENST00000503627 FBXO45P0C2W1 286 aa8.19□□□□□ -1.1
GYPA-203ENST00000503627 ATP2B4P23634 1241 aa8.19□□□□□ -1.1
GYPA-203ENST00000503627 FAM174AQ8TBP5 190 aa8.19□□□□□ -1.1
GYPA-203ENST00000503627 SMAPO00193 183 aa8.18□□□□□ -1.1
GYPA-203ENST00000503627 PBX2P40425 430 aa8.18□□□□□ -1.1
GYPA-203ENST00000503627 DEPDC4Q8N2C3 294 aa8.18□□□□□ -1.1
GYPA-203ENST00000503627 BIN2Q9UBW5 565 aaPredicted RBP8.18□□□□□ -1.1
GYPA-203ENST00000503627 SCNN1AP37088 669 aa8.17□□□□□ -1.1
GYPA-203ENST00000503627 ZNF326Q5BKZ1 582 aaKnown RBP8.17□□□□□ -1.1
GYPA-203ENST00000503627 FBXO33Q7Z6M2 555 aa8.17□□□□□ -1.1
GYPA-203ENST00000503627 PACS2Q86VP3 889 aa8.17□□□□□ -1.1
GYPA-203ENST00000503627 FAM200AQ8TCP9 573 aa8.17□□□□□ -1.1
GYPA-203ENST00000503627 BCL2L12Q9HB09 334 aa8.17□□□□□ -1.1
GYPA-203ENST00000503627 MKRN1Q9UHC7 482 aaKnown RBP8.17□□□□□ -1.1
GYPA-203ENST00000503627 RECKO95980 971 aa8.16□□□□□ -1.1
GYPA-203ENST00000503627 ZC3H6P61129 1189 aaKnown RBP8.16□□□□□ -1.1
GYPA-203ENST00000503627 SYMPKQ92797 1274 aaKnown RBP8.16□□□□□ -1.1
GYPA-203ENST00000503627 CDCA7Q9BWT1 371 aaPredicted RBP8.16□□□□□ -1.1
GYPA-203ENST00000503627 ZBBXA8MT70 800 aa8.15□□□□□ -1.1
GYPA-203ENST00000503627 RASA1P20936 1047 aa8.15□□□□□ -1.1
GYPA-203ENST00000503627 CANXP27824 592 aaKnown RBP8.15□□□□□ -1.1
GYPA-203ENST00000503627 LARP1Q6PKG0 1096 aaKnown RBP8.15□□□□□ -1.1
GYPA-203ENST00000503627 ANKMY2Q8IV38 441 aa8.15□□□□□ -1.1
GYPA-203ENST00000503627 C1orf216Q8TAB5 229 aa8.15□□□□□ -1.1
GYPA-203ENST00000503627 TAGLNQ01995 201 aaKnown RBP8.14□□□□□ -1.11
GYPA-203ENST00000503627 SPATA32Q96LK8 384 aa8.14□□□□□ -1.11
GYPA-203ENST00000503627 ATP5J2-PTCD1G3V325 749 aa8.13□□□□□ -1.11
GYPA-203ENST00000503627 SMARCA5O60264 1052 aaPredicted RBP8.13□□□□□ -1.11
GYPA-203ENST00000503627 FUT2Q10981 343 aa8.13□□□□□ -1.11
GYPA-203ENST00000503627 NCOA4Q13772 614 aa8.13□□□□□ -1.11
GYPA-203ENST00000503627 SWI5Q1ZZU3 235 aa8.13□□□□□ -1.11
GYPA-203ENST00000503627 CHMP4AQ9BY43 222 aa8.13□□□□□ -1.11
GYPA-203ENST00000503627 NAALADL2Q58DX5 795 aa8.12□□□□□ -1.11
GYPA-203ENST00000503627 PPP4R3BQ5MIZ7 849 aa8.12□□□□□ -1.11
GYPA-203ENST00000503627 SWT1Q5T5J6 900 aaKnown RBP8.12□□□□□ -1.11
GYPA-203ENST00000503627 UBXN4Q92575 508 aa8.12□□□□□ -1.11
GYPA-203ENST00000503627 PLA2G2EQ9NZK7 142 aa8.12□□□□□ -1.11
GYPA-203ENST00000503627 EGFL7Q9UHF1 273 aa8.12□□□□□ -1.11
GYPA-203ENST00000503627 LHX6Q9UPM6 363 aa8.12□□□□□ -1.11
GYPA-203ENST00000503627 PTPREP23469 700 aa8.11□□□□□ -1.11
GYPA-203ENST00000503627 DPYDQ12882 1025 aa8.11□□□□□ -1.11
GYPA-203ENST00000503627 GRIPAP1Q4V328 841 aa8.11□□□□□ -1.11
GYPA-203ENST00000503627 POTEEQ6S8J3 1075 aa8.11□□□□□ -1.11
GYPA-203ENST00000503627 PROX2Q3B8N5 592 aa8.1□□□□□ -1.11
GYPA-203ENST00000503627 DESI1Q6ICB0 168 aa8.1□□□□□ -1.11
GYPA-203ENST00000503627 RETREG3Q86VR2 466 aa8.1□□□□□ -1.11
GYPA-203ENST00000503627 HCSTQ9UBK5 93 aa8.1□□□□□ -1.11
GYPA-203ENST00000503627 AXIN2Q9Y2T1 843 aa8.1□□□□□ -1.11
GYPA-203ENST00000503627 PPM1GO15355 546 aaPredicted RBP8.09□□□□□ -1.11
GYPA-203ENST00000503627 SF3A1Q15459 793 aaKnown RBP8.09□□□□□ -1.11
GYPA-203ENST00000503627 LYPD8Q6UX82 237 aa8.09□□□□□ -1.11
GYPA-203ENST00000503627 FKBPLQ9UIM3 349 aa8.09□□□□□ -1.11
GYPA-203ENST00000503627 H3BRB1 525 aa8.08□□□□□ -1.12
GYPA-203ENST00000503627 ICMTO60725 284 aa8.08□□□□□ -1.12
GYPA-203ENST00000503627 ZNF211Q13398 564 aaPredicted RBP8.08□□□□□ -1.12
GYPA-203ENST00000503627 TAS1R3Q7RTX0 852 aa8.08□□□□□ -1.12
GYPA-203ENST00000503627 PHTF2Q8N3S3 785 aa8.08□□□□□ -1.12
GYPA-203ENST00000503627 OGFOD1Q8N543 542 aa8.08□□□□□ -1.12
GYPA-203ENST00000503627 ASB16Q96NS5 453 aa8.08□□□□□ -1.12
GYPA-203ENST00000503627 TUT1Q9H6E5 874 aaKnown RBP8.08□□□□□ -1.12
GYPA-203ENST00000503627 CADPSQ9ULU8 1353 aa8.08□□□□□ -1.12
GYPA-203ENST00000503627 LZTS3O60299 673 aaPredicted RBP8.07□□□□□ -1.12
GYPA-203ENST00000503627 ABL1P00519 1130 aa8.07□□□□□ -1.12
GYPA-203ENST00000503627 ATP6V1AP38606 617 aa8.07□□□□□ -1.12
GYPA-203ENST00000503627 CLDN10P78369 228 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms