RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 COG3Q96JB2 828 aa8.17□□□□□ -1.1
LINC00939-201ENST00000502479 KIF13AQ9H1H9 1805 aa8.16□□□□□ -1.1
LINC00939-201ENST00000502479 CPS1P31327 1500 aa8.16□□□□□ -1.1
LINC00939-201ENST00000502479 NLRP1Q9C000 1473 aa8.16□□□□□ -1.1
LINC00939-201ENST00000502479 A0A1W2PP64 1363 aa8.16□□□□□ -1.1
LINC00939-201ENST00000502479 KIF24Q5T7B8 1368 aa8.16□□□□□ -1.1
LINC00939-201ENST00000502479 VIRMAQ69YN4 1812 aaKnown RBP8.16□□□□□ -1.1
LINC00939-201ENST00000502479 FRAT1Q92837 279 aaPredicted RBP8.16□□□□□ -1.1
LINC00939-201ENST00000502479 PLIN1O60240 522 aa8.16□□□□□ -1.1
LINC00939-201ENST00000502479 AEBP2Q6ZN18 517 aaPredicted RBP8.16□□□□□ -1.1
LINC00939-201ENST00000502479 CARD14Q9BXL6 1004 aa8.16□□□□□ -1.1
LINC00939-201ENST00000502479 CABP2Q9NPB3 220 aa8.16□□□□□ -1.1
LINC00939-201ENST00000502479 EID1Q9Y6B2 187 aa8.16□□□□□ -1.1
LINC00939-201ENST00000502479 AATKQ6ZMQ8 1374 aa8.16□□□□□ -1.1
LINC00939-201ENST00000502479 PRAM1Q96QH2 718 aa8.16□□□□□ -1.1
LINC00939-201ENST00000502479 SMC4Q9NTJ3 1288 aa8.15□□□□□ -1.1
LINC00939-201ENST00000502479 STK26Q9P289 416 aa8.15□□□□□ -1.1
LINC00939-201ENST00000502479 CDK12Q9NYV4 1490 aaPredicted RBP8.15□□□□□ -1.11
LINC00939-201ENST00000502479 MSH5O43196 834 aa8.15□□□□□ -1.11
LINC00939-201ENST00000502479 RAPGEF3O95398 923 aa8.15□□□□□ -1.11
LINC00939-201ENST00000502479 MVPQ14764 893 aaKnown RBP8.15□□□□□ -1.11
LINC00939-201ENST00000502479 TNRQ92752 1358 aa8.15□□□□□ -1.11
LINC00939-201ENST00000502479 RARSP54136 660 aaKnown RBP8.14□□□□□ -1.11
LINC00939-201ENST00000502479 IDI1Q13907 227 aa8.14□□□□□ -1.11
LINC00939-201ENST00000502479 TMEM132EQ6IEE7 984 aa8.14□□□□□ -1.11
LINC00939-201ENST00000502479 SLC12A5Q9H2X9 1139 aa8.14□□□□□ -1.11
LINC00939-201ENST00000502479 YEATS2Q9ULM3 1422 aa8.14□□□□□ -1.11
LINC00939-201ENST00000502479 TNNT2P45379 298 aaPredicted RBP8.14□□□□□ -1.11
LINC00939-201ENST00000502479 IFT57Q9NWB7 429 aa8.14□□□□□ -1.11
LINC00939-201ENST00000502479 A2ML1A8K2U0 1454 aa8.14□□□□□ -1.11
LINC00939-201ENST00000502479 IL27Q8NEV9 243 aa8.13□□□□□ -1.11
LINC00939-201ENST00000502479 API5Q9BZZ5 524 aaKnown RBP8.13□□□□□ -1.11
LINC00939-201ENST00000502479 PPIP5K1Q6PFW1 1433 aa8.13□□□□□ -1.11
LINC00939-201ENST00000502479 MINK1Q8N4C8 1332 aaPredicted RBP8.13□□□□□ -1.11
LINC00939-201ENST00000502479 RIMS1Q86UR5 1692 aaKnown RBP8.13□□□□□ -1.11
LINC00939-201ENST00000502479 ARHGAP45Q92619 1136 aa8.13□□□□□ -1.11
LINC00939-201ENST00000502479 RIPK4P57078 832 aa8.13□□□□□ -1.11
LINC00939-201ENST00000502479 GCC1Q96CN9 775 aa8.13□□□□□ -1.11
LINC00939-201ENST00000502479 ITPRIPQ8IWB1 547 aa8.12□□□□□ -1.11
LINC00939-201ENST00000502479 DEKP35659 375 aaKnown RBP8.12□□□□□ -1.11
LINC00939-201ENST00000502479 NBR1Q14596 966 aa8.12□□□□□ -1.11
LINC00939-201ENST00000502479 NEUROD2Q15784 382 aa8.12□□□□□ -1.11
LINC00939-201ENST00000502479 COL3A1P02461 1466 aaPredicted RBP8.12□□□□□ -1.11
LINC00939-201ENST00000502479 TMPOP42166 694 aaKnown RBP8.12□□□□□ -1.11
LINC00939-201ENST00000502479 RGS3P49796 1198 aa8.12□□□□□ -1.11
LINC00939-201ENST00000502479 BRPF1P55201 1214 aaPredicted RBP8.12□□□□□ -1.11
LINC00939-201ENST00000502479 HDAC1Q13547 482 aaPredicted RBP8.12□□□□□ -1.11
LINC00939-201ENST00000502479 L1TD1Q5T7N2 865 aaKnown RBP8.12□□□□□ -1.11
LINC00939-201ENST00000502479 TTC21BQ7Z4L5 1316 aa8.12□□□□□ -1.11
LINC00939-201ENST00000502479 WASLO00401 505 aaPredicted RBP8.11□□□□□ -1.11
LINC00939-201ENST00000502479 MON2Q7Z3U7 1717 aa8.11□□□□□ -1.11
LINC00939-201ENST00000502479 PLEKHG1Q9ULL1 1385 aa8.11□□□□□ -1.11
LINC00939-201ENST00000502479 NFE2L2Q16236 605 aa8.11□□□□□ -1.11
LINC00939-201ENST00000502479 HSCBQ8IWL3 235 aa8.11□□□□□ -1.11
LINC00939-201ENST00000502479 SOS1Q07889 1333 aaPredicted RBP8.11□□□□□ -1.11
LINC00939-201ENST00000502479 TTC21AQ8NDW8 1320 aa8.11□□□□□ -1.11
LINC00939-201ENST00000502479 TECPR2O15040 1411 aa8.11□□□□□ -1.11
LINC00939-201ENST00000502479 AKAP12Q02952 1782 aa8.1□□□□□ -1.11
LINC00939-201ENST00000502479 MYO5BQ9ULV0 1848 aa8.1□□□□□ -1.11
LINC00939-201ENST00000502479 NRKQ7Z2Y5 1582 aa8.1□□□□□ -1.11
LINC00939-201ENST00000502479 PNPLA6Q8IY17 1366 aa8.1□□□□□ -1.11
LINC00939-201ENST00000502479 PHF23Q9BUL5 403 aaPredicted RBP8.1□□□□□ -1.11
LINC00939-201ENST00000502479 BCAR3O75815 825 aa8.1□□□□□ -1.11
LINC00939-201ENST00000502479 LRRC7Q96NW7 1537 aa8.1□□□□□ -1.11
LINC00939-201ENST00000502479 COG6Q9Y2V7 657 aa8.1□□□□□ -1.11
LINC00939-201ENST00000502479 ATF7IPQ6VMQ6 1270 aa8.09□□□□□ -1.11
LINC00939-201ENST00000502479 TSPOAP1O95153 1857 aa8.09□□□□□ -1.11
LINC00939-201ENST00000502479 SAFB2Q14151 953 aaKnown RBP eCLIP8.09□□□□□ -1.12
LINC00939-201ENST00000502479 NUTM2DQ5VT03 806 aaPredicted RBP8.09□□□□□ -1.12
LINC00939-201ENST00000502479 CYB5RLQ6IPT4 315 aa8.09□□□□□ -1.12
LINC00939-201ENST00000502479 PLEKHF1Q96S99 279 aa8.08□□□□□ -1.12
LINC00939-201ENST00000502479 CABP1Q9NZU7 370 aa8.08□□□□□ -1.12
LINC00939-201ENST00000502479 SETD1AO15047 1707 aaKnown RBP8.08□□□□□ -1.12
LINC00939-201ENST00000502479 RTF1Q92541 710 aaKnown RBP8.08□□□□□ -1.12
LINC00939-201ENST00000502479 GGNBP2Q9H3C7 697 aa8.08□□□□□ -1.12
LINC00939-201ENST00000502479 RRP7AQ9Y3A4 280 aaKnown RBP8.08□□□□□ -1.12
LINC00939-201ENST00000502479 HMMRO75330 724 aa8.08□□□□□ -1.12
LINC00939-201ENST00000502479 ARHGEF10O15013 1369 aa8.08□□□□□ -1.12
LINC00939-201ENST00000502479 FYB1O15117 783 aa8.07□□□□□ -1.12
LINC00939-201ENST00000502479 C20orf194Q5TEA3 1177 aa8.07□□□□□ -1.12
LINC00939-201ENST00000502479 UBR1Q8IWV7 1749 aa8.07□□□□□ -1.12
LINC00939-201ENST00000502479 TOPAZ1Q8N9V7 1692 aa8.07□□□□□ -1.12
LINC00939-201ENST00000502479 HTATSF1O43719 755 aaKnown RBP8.07□□□□□ -1.12
LINC00939-201ENST00000502479 C8orf34Q49A92 452 aa8.07□□□□□ -1.12
LINC00939-201ENST00000502479 PANK1Q8TE04 598 aa8.07□□□□□ -1.12
LINC00939-201ENST00000502479 CPSF1Q10570 1443 aaKnown RBP8.07□□□□□ -1.12
LINC00939-201ENST00000502479 ANKARQ7Z5J8 1434 aa8.07□□□□□ -1.12
LINC00939-201ENST00000502479 SENP3-EIF4A1A0A087X0R7 540 aa8.07□□□□□ -1.12
LINC00939-201ENST00000502479 HDAC5Q9UQL6 1122 aa8.07□□□□□ -1.12
LINC00939-201ENST00000502479 GOLGA6L22H0YM25 854 aa8.06□□□□□ -1.12
LINC00939-201ENST00000502479 EXOSC9Q06265 439 aaKnown RBP8.06□□□□□ -1.12
LINC00939-201ENST00000502479 PTPRCP08575 1304 aa8.06□□□□□ -1.12
LINC00939-201ENST00000502479 RTL1A6NKG5 1358 aa8.06□□□□□ -1.12
LINC00939-201ENST00000502479 TMEM2Q9UHN6 1383 aa8.06□□□□□ -1.12
LINC00939-201ENST00000502479 DDX11L8A8MPP1 907 aa8.06□□□□□ -1.12
LINC00939-201ENST00000502479 NUDT16Q96DE0 195 aaKnown RBP8.06□□□□□ -1.12
LINC00939-201ENST00000502479 NOB1Q9ULX3 412 aaKnown RBP8.06□□□□□ -1.12
LINC00939-201ENST00000502479 PTCH1Q13635 1447 aa8.06□□□□□ -1.12
LINC00939-201ENST00000502479 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.06□□□□□ -1.12
LINC00939-201ENST00000502479 PDZRN3Q9UPQ7 1066 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms