RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 PNPLA6Q8IY17 1366 aa24.15■■□□□ 1.46
LINC00535-201ENST00000501400 NME9Q86XW9 330 aa24.15■■□□□ 1.46
LINC00535-201ENST00000501400 MAP2P11137 1827 aaKnown RBP24.15■■□□□ 1.46
LINC00535-201ENST00000501400 PLEKHG3A1L390 1219 aa24.14■■□□□ 1.45
LINC00535-201ENST00000501400 NUTM2FA1L443 756 aa24.14■■□□□ 1.45
LINC00535-201ENST00000501400 ERICH6BQ5W0A0 696 aa24.13■■□□□ 1.45
LINC00535-201ENST00000501400 NPHP4O75161 1426 aaPredicted RBP24.12■■□□□ 1.45
LINC00535-201ENST00000501400 USP6P35125 1406 aa24.12■■□□□ 1.45
LINC00535-201ENST00000501400 ACEP12821 1306 aa24.12■■□□□ 1.45
LINC00535-201ENST00000501400 ZNF692Q9BU19 519 aaPredicted RBP24.12■■□□□ 1.45
LINC00535-201ENST00000501400 ZRANB1Q9UGI0 708 aa24.11■■□□□ 1.45
LINC00535-201ENST00000501400 RCAN3Q9UKA8 241 aa24.1■■□□□ 1.45
LINC00535-201ENST00000501400 SSH2Q76I76 1423 aa24.09■■□□□ 1.45
LINC00535-201ENST00000501400 DUSP27Q5VZP5 1158 aa24.09■■□□□ 1.45
LINC00535-201ENST00000501400 RUNDC1Q96C34 613 aa24.09■■□□□ 1.45
LINC00535-201ENST00000501400 ANKARQ7Z5J8 1434 aa24.08■■□□□ 1.45
LINC00535-201ENST00000501400 FBLN1P23142 703 aa24.08■■□□□ 1.45
LINC00535-201ENST00000501400 GOLGA2Q08379 1002 aa24.08■■□□□ 1.45
LINC00535-201ENST00000501400 NGEFQ8N5V2 710 aa24.08■■□□□ 1.44
LINC00535-201ENST00000501400 POLKQ9UBT6 870 aa24.08■■□□□ 1.44
LINC00535-201ENST00000501400 AATKQ6ZMQ8 1374 aa24.08■■□□□ 1.44
LINC00535-201ENST00000501400 OVOS2A0A0J9YW53 1432 aa24.07■■□□□ 1.44
LINC00535-201ENST00000501400 OVOS2Q6IE36 1432 aa24.07■■□□□ 1.44
LINC00535-201ENST00000501400 NWD1Q149M9 1564 aa24.06■■□□□ 1.44
LINC00535-201ENST00000501400 TTC21BQ7Z4L5 1316 aa24.06■■□□□ 1.44
LINC00535-201ENST00000501400 CDK12Q9NYV4 1490 aaPredicted RBP24.06■■□□□ 1.44
LINC00535-201ENST00000501400 U2AF1L5P0DN76 240 aaPredicted RBP24.06■■□□□ 1.44
LINC00535-201ENST00000501400 U2AF1Q01081 240 aaKnown RBP eCLIP24.06■■□□□ 1.44
LINC00535-201ENST00000501400 SLFN5Q08AF3 891 aa24.05■■□□□ 1.44
LINC00535-201ENST00000501400 TRMT2AQ8IZ69 625 aaKnown RBP24.05■■□□□ 1.44
LINC00535-201ENST00000501400 SPINK5Q9NQ38 1064 aaPredicted RBP24.05■■□□□ 1.44
LINC00535-201ENST00000501400 DMRT2Q9Y5R5 561 aa24.05■■□□□ 1.44
LINC00535-201ENST00000501400 RRP1P56182 461 aaKnown RBP24.04■■□□□ 1.44
LINC00535-201ENST00000501400 TCP11L2Q8N4U5 519 aa24.04■■□□□ 1.44
LINC00535-201ENST00000501400 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
LINC00535-201ENST00000501400 COG3Q96JB2 828 aa24.03■■□□□ 1.44
LINC00535-201ENST00000501400 WWC1Q8IX03 1113 aa24.02■■□□□ 1.44
LINC00535-201ENST00000501400 EMILIN1Q9Y6C2 1016 aa24.02■■□□□ 1.44
LINC00535-201ENST00000501400 LRRC7Q96NW7 1537 aa24.01■■□□□ 1.43
LINC00535-201ENST00000501400 DIAPH1O60610 1272 aaKnown RBP24.01■■□□□ 1.43
LINC00535-201ENST00000501400 PMFBP1Q8TBY8 1022 aa24.01■■□□□ 1.43
LINC00535-201ENST00000501400 PPP4R2Q9NY27 417 aa24.01■■□□□ 1.43
LINC00535-201ENST00000501400 PIK3C2AO00443 1686 aa24■■□□□ 1.43
LINC00535-201ENST00000501400 U2SURPO15042 1029 aaKnown RBP24■■□□□ 1.43
LINC00535-201ENST00000501400 PLEKHF1Q96S99 279 aa24■■□□□ 1.43
LINC00535-201ENST00000501400 RRP7AQ9Y3A4 280 aaKnown RBP24■■□□□ 1.43
LINC00535-201ENST00000501400 ADGRL3Q9HAR2 1447 aa24■■□□□ 1.43
LINC00535-201ENST00000501400 E9PSI1 815 aa23.97■■□□□ 1.43
LINC00535-201ENST00000501400 PEAK1Q9H792 1746 aa23.96■■□□□ 1.43
LINC00535-201ENST00000501400 MARF1Q9Y4F3 1742 aaKnown RBP23.96■■□□□ 1.43
LINC00535-201ENST00000501400 PPM1GO15355 546 aaPredicted RBP23.96■■□□□ 1.43
LINC00535-201ENST00000501400 USP31Q70CQ4 1352 aa23.96■■□□□ 1.43
LINC00535-201ENST00000501400 RRS1Q15050 365 aaKnown RBP23.96■■□□□ 1.43
LINC00535-201ENST00000501400 NEUROD2Q15784 382 aa23.96■■□□□ 1.43
LINC00535-201ENST00000501400 CCDC27Q2M243 656 aa23.96■■□□□ 1.43
LINC00535-201ENST00000501400 NCBP3Q53F19 620 aaKnown RBP23.96■■□□□ 1.43
LINC00535-201ENST00000501400 RBM33Q96EV2 1170 aaKnown RBP23.96■■□□□ 1.43
LINC00535-201ENST00000501400 TTC21AQ8NDW8 1320 aa23.95■■□□□ 1.42
LINC00535-201ENST00000501400 USP54Q70EL1 1684 aa23.95■■□□□ 1.42
LINC00535-201ENST00000501400 NGDNQ8NEJ9 315 aaKnown RBP23.93■■□□□ 1.42
LINC00535-201ENST00000501400 PELP1Q8IZL8 1130 aaKnown RBP23.92■■□□□ 1.42
LINC00535-201ENST00000501400 IL13P35225 146 aa23.92■■□□□ 1.42
LINC00535-201ENST00000501400 RSPH6AQ9H0K4 717 aa23.9■■□□□ 1.42
LINC00535-201ENST00000501400 B4GALNT3Q6L9W6 998 aa23.9■■□□□ 1.42
LINC00535-201ENST00000501400 WDR63Q8IWG1 891 aa23.9■■□□□ 1.42
LINC00535-201ENST00000501400 TMPOP42166 694 aaKnown RBP23.88■■□□□ 1.41
LINC00535-201ENST00000501400 MAPK8IP3Q9UPT6 1336 aa23.88■■□□□ 1.41
LINC00535-201ENST00000501400 STRCP1A6NGW2 1772 aa23.88■■□□□ 1.41
LINC00535-201ENST00000501400 FCHSD2O94868 740 aa23.88■■□□□ 1.41
LINC00535-201ENST00000501400 PLIN1O60240 522 aa23.87■■□□□ 1.41
LINC00535-201ENST00000501400 RGPD1P0DJD0 1748 aa23.87■■□□□ 1.41
LINC00535-201ENST00000501400 TRIM35Q9UPQ4 493 aa23.85■■□□□ 1.41
LINC00535-201ENST00000501400 PRKAR2BP31323 418 aa23.84■■□□□ 1.41
LINC00535-201ENST00000501400 PHF8Q9UPP1 1060 aa23.84■■□□□ 1.41
LINC00535-201ENST00000501400 EXOC6Q8TAG9 804 aa23.84■■□□□ 1.41
LINC00535-201ENST00000501400 PNNQ9H307 717 aaKnown RBP23.83■■□□□ 1.41
LINC00535-201ENST00000501400 HMOX1P09601 288 aa23.82■■□□□ 1.4
LINC00535-201ENST00000501400 MAP3K19Q56UN5 1328 aa23.8■■□□□ 1.4
LINC00535-201ENST00000501400 EIF4A2Q14240 407 aaKnown RBP23.8■■□□□ 1.4
LINC00535-201ENST00000501400 KDM4FA0A1W2PPD8 638 aa23.8■■□□□ 1.4
LINC00535-201ENST00000501400 DLG5Q8TDM6 1919 aa23.79■■□□□ 1.4
LINC00535-201ENST00000501400 C20orf194Q5TEA3 1177 aa23.79■■□□□ 1.4
LINC00535-201ENST00000501400 PHACTR3Q96KR7 559 aa23.79■■□□□ 1.4
LINC00535-201ENST00000501400 LMTK3Q96Q04 1460 aa23.79■■□□□ 1.4
LINC00535-201ENST00000501400 SOX12O15370 315 aa23.78■■□□□ 1.4
LINC00535-201ENST00000501400 RIPK4P57078 832 aa23.78■■□□□ 1.4
LINC00535-201ENST00000501400 SBNO1A3KN83 1393 aa23.78■■□□□ 1.4
LINC00535-201ENST00000501400 HSPA2P54652 639 aa23.78■■□□□ 1.4
LINC00535-201ENST00000501400 C14orf37Q86TY3 774 aa23.78■■□□□ 1.4
LINC00535-201ENST00000501400 HSP90AB2PQ58FF8 381 aa23.77■■□□□ 1.4
LINC00535-201ENST00000501400 PROSER2Q86WR7 435 aaPredicted RBP23.77■■□□□ 1.4
LINC00535-201ENST00000501400 FLT4P35916 1363 aa23.76■■□□□ 1.39
LINC00535-201ENST00000501400 BCAR3O75815 825 aa23.76■■□□□ 1.39
LINC00535-201ENST00000501400 NLRP6P59044 892 aa23.76■■□□□ 1.39
LINC00535-201ENST00000501400 ESCO1Q5FWF5 840 aa23.76■■□□□ 1.39
LINC00535-201ENST00000501400 CRBNQ96SW2 442 aa23.76■■□□□ 1.39
LINC00535-201ENST00000501400 CCDC136Q96JN2 1154 aa23.75■■□□□ 1.39
LINC00535-201ENST00000501400 MYH16Q9H6N6 1097 aa23.75■■□□□ 1.39
LINC00535-201ENST00000501400 STRCQ7RTU9 1775 aa23.75■■□□□ 1.39
LINC00535-201ENST00000501400 IL16Q14005 1332 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms