RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 YBX3P16989 372 aaKnown RBP eCLIP8.81□□□□□ -12e-8■■■□□ 17.5
FXN-205ENST00000498653 AKT1S1Q96B36 256 aa8.81□□□□□ -1
FXN-205ENST00000498653 ORAI2Q96SN7 254 aa8.81□□□□□ -1
FXN-205ENST00000498653 MTUS2Q5JR59 1369 aa8.81□□□□□ -1
FXN-205ENST00000498653 USP19O94966 1318 aa8.8□□□□□ -1
FXN-205ENST00000498653 RGS19P49795 217 aa8.8□□□□□ -1
FXN-205ENST00000498653 ARXQ96QS3 562 aa8.8□□□□□ -1
FXN-205ENST00000498653 CCDC141Q6ZP82 1450 aa8.8□□□□□ -1
FXN-205ENST00000498653 RIMS2Q9UQ26 1411 aa8.8□□□□□ -1
FXN-205ENST00000498653 ZNF644Q9H582 1327 aaPredicted RBP8.8□□□□□ -1
FXN-205ENST00000498653 FAM196AQ6ZSG2 479 aa8.79□□□□□ -1
FXN-205ENST00000498653 PELP1Q8IZL8 1130 aaKnown RBP8.79□□□□□ -1
FXN-205ENST00000498653 PROM2Q8N271 834 aa8.79□□□□□ -1
FXN-205ENST00000498653 FBXO3Q9UK99 471 aa8.79□□□□□ -1
FXN-205ENST00000498653 AMOTL2Q9Y2J4 779 aa8.79□□□□□ -1
FXN-205ENST00000498653 COL24A1Q17RW2 1714 aa8.79□□□□□ -1
FXN-205ENST00000498653 NRXN3Q9Y4C0 1643 aa8.79□□□□□ -1
FXN-205ENST00000498653 FYCO1Q9BQS8 1478 aa8.78□□□□□ -1
FXN-205ENST00000498653 POTEHQ6S545 545 aa8.78□□□□□ -1
FXN-205ENST00000498653 MTFR1LQ9H019 292 aa8.78□□□□□ -1
FXN-205ENST00000498653 CFDP1Q9UEE9 299 aaPredicted RBP8.78□□□□□ -1
FXN-205ENST00000498653 CCDC18Q5T9S5 1454 aa8.77□□□□□ -1
FXN-205ENST00000498653 TULP4Q9NRJ4 1543 aa8.76□□□□□ -1.01
FXN-205ENST00000498653 SUPT5HO00267 1087 aaKnown RBP8.76□□□□□ -1.01
FXN-205ENST00000498653 TOMM70O94826 608 aa8.76□□□□□ -1.01
FXN-205ENST00000498653 ARHGEF5Q12774 1597 aa8.76□□□□□ -1.01
FXN-205ENST00000498653 NLGN2Q8NFZ4 835 aa8.75□□□□□ -1.01
FXN-205ENST00000498653 GRIN3BO60391 1043 aa8.74□□□□□ -1.01
FXN-205ENST00000498653 ABHD8Q96I13 439 aa8.74□□□□□ -1.01
FXN-205ENST00000498653 NPHP3Q7Z494 1330 aa8.74□□□□□ -1.01
FXN-205ENST00000498653 XPCQ01831 940 aaPredicted RBP8.73□□□□□ -1.01
FXN-205ENST00000498653 SPATA31A5Q5VU36 1347 aa8.73□□□□□ -1.01
FXN-205ENST00000498653 SPATA31A7Q8IWB4 1347 aa8.73□□□□□ -1.01
FXN-205ENST00000498653 SBF2Q86WG5 1849 aa8.73□□□□□ -1.01
FXN-205ENST00000498653 PEAK1Q9H792 1746 aa8.72□□□□□ -1.01
FXN-205ENST00000498653 DUOX2Q9NRD8 1548 aa8.72□□□□□ -1.01
FXN-205ENST00000498653 CHGAP10645 457 aaKnown RBP8.72□□□□□ -1.01
FXN-205ENST00000498653 TOPAZ1Q8N9V7 1692 aa8.72□□□□□ -1.01
FXN-205ENST00000498653 CCNB3Q8WWL7 1395 aa8.71□□□□□ -1.02
FXN-205ENST00000498653 COL14A1Q05707 1796 aaKnown RBP8.71□□□□□ -1.02
FXN-205ENST00000498653 PRAG1Q86YV5 1406 aa8.71□□□□□ -1.02
FXN-205ENST00000498653 LMTK2Q8IWU2 1503 aa8.7□□□□□ -1.02
FXN-205ENST00000498653 SPDYE1Q8NFV5 336 aaPredicted RBP8.7□□□□□ -1.02
FXN-205ENST00000498653 RRBP1Q9P2E9 1410 aaKnown RBP8.7□□□□□ -1.02
FXN-205ENST00000498653 PAPPAQ13219 1627 aa8.69□□□□□ -1.02
FXN-205ENST00000498653 CUL9Q8IWT3 2517 aa8.69□□□□□ -1.02
FXN-205ENST00000498653 PRDM10Q9NQV6 1147 aa8.69□□□□□ -1.02
FXN-205ENST00000498653 SPATA31A3Q5VYP0 1347 aa8.69□□□□□ -1.02
FXN-205ENST00000498653 REM2Q8IYK8 340 aaPredicted RBP8.68□□□□□ -1.02
FXN-205ENST00000498653 DHX57Q6P158 1386 aaKnown RBP8.68□□□□□ -1.02
FXN-205ENST00000498653 FOXN1O15353 648 aa8.67□□□□□ -1.02
FXN-205ENST00000498653 KLHL34Q8N239 644 aa8.67□□□□□ -1.02
FXN-205ENST00000498653 RBM46Q8TBY0 533 aaKnown RBP8.67□□□□□ -1.02
FXN-205ENST00000498653 BCL11BQ9C0K0 894 aaPredicted RBP8.67□□□□□ -1.02
FXN-205ENST00000498653 CDC42BPGQ6DT37 1551 aa8.66□□□□□ -1.02
FXN-205ENST00000498653 METP08581 1390 aa8.66□□□□□ -1.02
FXN-205ENST00000498653 PLSCR1O15162 318 aa8.66□□□□□ -1.02
FXN-205ENST00000498653 SLC15A2Q16348 729 aa8.66□□□□□ -1.02
FXN-205ENST00000498653 CABLES1Q8TDN4 633 aa8.66□□□□□ -1.02
FXN-205ENST00000498653 CICQ96RK0 1608 aaPredicted RBP8.65□□□□□ -1.02
FXN-205ENST00000498653 FOXO3O43524 673 aa8.65□□□□□ -1.02
FXN-205ENST00000498653 BTG4Q9NY30 223 aa8.65□□□□□ -1.02
FXN-205ENST00000498653 TNS3Q68CZ2 1445 aa8.64□□□□□ -1.03
FXN-205ENST00000498653 CASKIN1Q8WXD9 1431 aa8.64□□□□□ -1.03
FXN-205ENST00000498653 PITPNM2Q9BZ72 1349 aa8.64□□□□□ -1.03
FXN-205ENST00000498653 A0A0C4DFX4 3053 aa8.64□□□□□ -1.03
FXN-205ENST00000498653 STK32BQ9NY57 414 aa8.64□□□□□ -1.03
FXN-205ENST00000498653 TECPR2O15040 1411 aa8.63□□□□□ -1.03
FXN-205ENST00000498653 QSER1Q2KHR3 1735 aa8.63□□□□□ -1.03
FXN-205ENST00000498653 PARP4Q9UKK3 1724 aaKnown RBP8.63□□□□□ -1.03
FXN-205ENST00000498653 KIF1AQ12756 1690 aa8.63□□□□□ -1.03
FXN-205ENST00000498653 SPATA31A1Q5TZJ5 1347 aa8.63□□□□□ -1.03
FXN-205ENST00000498653 DLL1O00548 723 aa8.63□□□□□ -1.03
FXN-205ENST00000498653 FSTL1Q12841 308 aa8.63□□□□□ -1.03
FXN-205ENST00000498653 NMRK2Q9NPI5 230 aa8.63□□□□□ -1.03
FXN-205ENST00000498653 SLC52A1Q9NWF4 448 aa8.63□□□□□ -1.03
FXN-205ENST00000498653 CLEC11AQ9Y240 323 aa8.63□□□□□ -1.03
FXN-205ENST00000498653 CRYBG1Q9Y4K1 1723 aa8.63□□□□□ -1.03
FXN-205ENST00000498653 CCDC85CA6NKD9 419 aa8.62□□□□□ -1.03
FXN-205ENST00000498653 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.62□□□□□ -1.03
FXN-205ENST00000498653 CCDC144AA2RUR9 1427 aa8.62□□□□□ -1.03
FXN-205ENST00000498653 PHRF1Q9P1Y6 1649 aaKnown RBP8.62□□□□□ -1.03
FXN-205ENST00000498653 HDGFP51858 240 aaKnown RBP8.61□□□□□ -1.03
FXN-205ENST00000498653 HAP1P54257 671 aaPredicted RBP8.61□□□□□ -1.03
FXN-205ENST00000498653 PRPF38BQ5VTL8 546 aaKnown RBP8.61□□□□□ -1.03
FXN-205ENST00000498653 PTF1AQ7RTS3 328 aa8.61□□□□□ -1.03
FXN-205ENST00000498653 LRPPRCP42704 1394 aaKnown RBP8.61□□□□□ -1.03
FXN-205ENST00000498653 TUBGCP6Q96RT7 1819 aa8.6□□□□□ -1.03
FXN-205ENST00000498653 PLEKHG5O94827 1062 aa8.6□□□□□ -1.03
FXN-205ENST00000498653 ESCO1Q5FWF5 840 aa8.6□□□□□ -1.03
FXN-205ENST00000498653 IQGAP3Q86VI3 1631 aa8.59□□□□□ -1.03
FXN-205ENST00000498653 VASPP50552 380 aaPredicted RBP8.59□□□□□ -1.03
FXN-205ENST00000498653 C10orf71Q711Q0 1435 aa8.58□□□□□ -1.04
FXN-205ENST00000498653 PRR29P0C7W0 189 aa8.58□□□□□ -1.04
FXN-205ENST00000498653 ROBO2Q9HCK4 1378 aa8.58□□□□□ -1.04
FXN-205ENST00000498653 OVOS2A0A0G2JMS6 1433 aa8.57□□□□□ -1.04
FXN-205ENST00000498653 OVOS2A0A0J9YW53 1432 aa8.57□□□□□ -1.04
FXN-205ENST00000498653 OVOS2Q6IE36 1432 aa8.57□□□□□ -1.04
FXN-205ENST00000498653 PITPNM1O00562 1244 aa8.57□□□□□ -1.04
FXN-205ENST00000498653 PDE3BQ13370 1112 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms