RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 RNF20Q5VTR2 975 aa18.14■□□□□ 0.49
C4A-259ENST00000498271 CEP89Q96ST8 783 aa18.14■□□□□ 0.49
C4A-259ENST00000498271 TEFQ10587 303 aa18.14■□□□□ 0.49
C4A-259ENST00000498271 CPLX2Q6PUV4 134 aaKnown RBP18.13■□□□□ 0.49
C4A-259ENST00000498271 EXOSC9Q06265 439 aaKnown RBP18.13■□□□□ 0.49
C4A-259ENST00000498271 UGGT2Q9NYU1 1516 aa18.13■□□□□ 0.49
C4A-259ENST00000498271 C1orf141Q5JVX7 400 aa18.13■□□□□ 0.49
C4A-259ENST00000498271 CAVIN1Q6NZI2 390 aaKnown RBP18.12■□□□□ 0.49
C4A-259ENST00000498271 CREBRFQ8IUR6 639 aa18.12■□□□□ 0.49
C4A-259ENST00000498271 RABEP1Q15276 862 aa18.12■□□□□ 0.49
C4A-259ENST00000498271 CCDC73Q6ZRK6 1079 aa18.12■□□□□ 0.49
C4A-259ENST00000498271 CWC22Q9HCG8 908 aaKnown RBP18.12■□□□□ 0.49
C4A-259ENST00000498271 LRRFIP1Q32MZ4 808 aaKnown RBP18.12■□□□□ 0.49
C4A-259ENST00000498271 NECTIN2Q92692 538 aa18.11■□□□□ 0.49
C4A-259ENST00000498271 CLSTN1O94985 981 aa18.11■□□□□ 0.49
C4A-259ENST00000498271 RUFY1Q96T51 708 aa18.11■□□□□ 0.49
C4A-259ENST00000498271 EIF2S2P20042 333 aaKnown RBP18.11■□□□□ 0.49
C4A-259ENST00000498271 PRKAR2BP31323 418 aa18.11■□□□□ 0.49
C4A-259ENST00000498271 UBE2Q2Q8WVN8 375 aa18.11■□□□□ 0.49
C4A-259ENST00000498271 RBM10P98175 930 aaKnown RBP18.1■□□□□ 0.49
C4A-259ENST00000498271 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.1■□□□□ 0.49
C4A-259ENST00000498271 MSH5O43196 834 aa18.1■□□□□ 0.49
C4A-259ENST00000498271 TSPYL4Q9UJ04 414 aa18.1■□□□□ 0.49
C4A-259ENST00000498271 FKBP5Q13451 457 aaPredicted RBP18.1■□□□□ 0.49
C4A-259ENST00000498271 APPP05067 770 aa18.09■□□□□ 0.49
C4A-259ENST00000498271 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
C4A-259ENST00000498271 PDCL2Q8N4E4 241 aa18.09■□□□□ 0.49
C4A-259ENST00000498271 ANO2Q9NQ90 1003 aa18.09■□□□□ 0.49
C4A-259ENST00000498271 SLC52A1Q9NWF4 448 aa18.09■□□□□ 0.49
C4A-259ENST00000498271 UQCRHLA0A096LP55 91 aa18.08■□□□□ 0.49
C4A-259ENST00000498271 UQCRHP07919 91 aa18.08■□□□□ 0.49
C4A-259ENST00000498271 RPGRIP1LQ68CZ1 1315 aa18.08■□□□□ 0.49
C4A-259ENST00000498271 PDZRN3Q9UPQ7 1066 aa18.08■□□□□ 0.49
C4A-259ENST00000498271 WDR63Q8IWG1 891 aa18.08■□□□□ 0.48
C4A-259ENST00000498271 PES1O00541 588 aaKnown RBP18.08■□□□□ 0.48
C4A-259ENST00000498271 TAF7LQ5H9L4 462 aa18.08■□□□□ 0.48
C4A-259ENST00000498271 DMRT2Q9Y5R5 561 aa18.08■□□□□ 0.48
C4A-259ENST00000498271 LEKR1Q6ZMV7 388 aa18.07■□□□□ 0.48
C4A-259ENST00000498271 ZSCAN30Q86W11 494 aa18.07■□□□□ 0.48
C4A-259ENST00000498271 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
C4A-259ENST00000498271 VPS37CA5D8V6 355 aaPredicted RBP18.07■□□□□ 0.48
C4A-259ENST00000498271 MCM4P33991 863 aa18.07■□□□□ 0.48
C4A-259ENST00000498271 RAPGEF3O95398 923 aa18.07■□□□□ 0.48
C4A-259ENST00000498271 RNF214Q8ND24 703 aa18.07■□□□□ 0.48
C4A-259ENST00000498271 CDK19Q9BWU1 502 aa18.06■□□□□ 0.48
C4A-259ENST00000498271 RDXP35241 583 aaKnown RBP18.06■□□□□ 0.48
C4A-259ENST00000498271 CABP1Q9NZU7 370 aa18.06■□□□□ 0.48
C4A-259ENST00000498271 SLFN5Q08AF3 891 aa18.05■□□□□ 0.48
C4A-259ENST00000498271 TRIM29Q14134 588 aa18.05■□□□□ 0.48
C4A-259ENST00000498271 CCDC47Q96A33 483 aaKnown RBP18.05■□□□□ 0.48
C4A-259ENST00000498271 PDCL3Q9H2J4 239 aa18.05■□□□□ 0.48
C4A-259ENST00000498271 CTTNBP2Q8WZ74 1663 aa18.05■□□□□ 0.48
C4A-259ENST00000498271 HSP90AB4PQ58FF6 505 aa18.04■□□□□ 0.48
C4A-259ENST00000498271 C9orf78Q9NZ63 289 aaPredicted RBP18.04■□□□□ 0.48
C4A-259ENST00000498271 NSD3Q9BZ95 1437 aa18.04■□□□□ 0.48
C4A-259ENST00000498271 TRIM5Q9C035 493 aa18.04■□□□□ 0.48
C4A-259ENST00000498271 NOB1Q9ULX3 412 aaKnown RBP18.04■□□□□ 0.48
C4A-259ENST00000498271 PSME1Q06323 249 aa18.03■□□□□ 0.48
C4A-259ENST00000498271 SYNE3Q6ZMZ3 975 aa18.03■□□□□ 0.48
C4A-259ENST00000498271 THEMISQ8N1K5 641 aaPredicted RBP18.03■□□□□ 0.48
C4A-259ENST00000498271 PRPF40AO75400 957 aaKnown RBP18.03■□□□□ 0.48
C4A-259ENST00000498271 DCTN1Q14203 1278 aa18.03■□□□□ 0.48
C4A-259ENST00000498271 TSPYL1Q9H0U9 437 aa18.03■□□□□ 0.48
C4A-259ENST00000498271 CFAP43Q8NDM7 1665 aa18.03■□□□□ 0.48
C4A-259ENST00000498271 AKAP17AQ02040 695 aaKnown RBP18.03■□□□□ 0.48
C4A-259ENST00000498271 H0YHG0 523 aa18.02■□□□□ 0.48
C4A-259ENST00000498271 RAPGEF6Q8TEU7 1601 aa18.02■□□□□ 0.48
C4A-259ENST00000498271 CCDC112Q8NEF3 446 aa18.02■□□□□ 0.48
C4A-259ENST00000498271 TXNDC2Q86VQ3 553 aa18.02■□□□□ 0.48
C4A-259ENST00000498271 WWC1Q8IX03 1113 aa18.02■□□□□ 0.48
C4A-259ENST00000498271 CT47B1P0C2W7 299 aaPredicted RBP18.02■□□□□ 0.47
C4A-259ENST00000498271 TWISTNBQ3B726 338 aaPredicted RBP18.02■□□□□ 0.47
C4A-259ENST00000498271 PDCP20941 246 aa18.01■□□□□ 0.47
C4A-259ENST00000498271 GCC1Q96CN9 775 aa18.01■□□□□ 0.47
C4A-259ENST00000498271 NEXNQ0ZGT2 675 aa18.01■□□□□ 0.47
C4A-259ENST00000498271 ERC2O15083 957 aa18■□□□□ 0.47
C4A-259ENST00000498271 NLRP6P59044 892 aa18■□□□□ 0.47
C4A-259ENST00000498271 K7ELQ4 463 aaPredicted RBP18■□□□□ 0.47
C4A-259ENST00000498271 CPLX1O14810 134 aa18■□□□□ 0.47
C4A-259ENST00000498271 NUP153P49790 1475 aaKnown RBP18■□□□□ 0.47
C4A-259ENST00000498271 ATAD2Q6PL18 1390 aa18■□□□□ 0.47
C4A-259ENST00000498271 NUTM2GQ5VZR2 741 aa17.99■□□□□ 0.47
C4A-259ENST00000498271 OLFM4Q6UX06 510 aa17.99■□□□□ 0.47
C4A-259ENST00000498271 CCDC191Q8NCU4 936 aa17.99■□□□□ 0.47
C4A-259ENST00000498271 IFIT2P09913 472 aaKnown RBP17.99■□□□□ 0.47
C4A-259ENST00000498271 MVPQ14764 893 aaKnown RBP17.99■□□□□ 0.47
C4A-259ENST00000498271 PSMA5P28066 241 aa17.99■□□□□ 0.47
C4A-259ENST00000498271 USP8P40818 1118 aa17.98■□□□□ 0.47
C4A-259ENST00000498271 ATF7IPQ6VMQ6 1270 aa17.98■□□□□ 0.47
C4A-259ENST00000498271 TTC5Q8N0Z6 440 aa17.98■□□□□ 0.47
C4A-259ENST00000498271 CCDC192P0DO97 292 aa17.98■□□□□ 0.47
C4A-259ENST00000498271 C1orf115Q9H7X2 142 aa17.98■□□□□ 0.47
C4A-259ENST00000498271 TCOF1Q13428 1488 aaKnown RBP17.98■□□□□ 0.47
C4A-259ENST00000498271 RRP12Q5JTH9 1297 aaKnown RBP17.98■□□□□ 0.47
C4A-259ENST00000498271 ADGRL1O94910 1474 aa17.97■□□□□ 0.47
C4A-259ENST00000498271 TOMM22Q9NS69 142 aa17.97■□□□□ 0.47
C4A-259ENST00000498271 DISP3Q9P2K9 1392 aa17.97■□□□□ 0.47
C4A-259ENST00000498271 RTEL1-TNFRSF6BF6WH68 1400 aa17.96■□□□□ 0.47
C4A-259ENST00000498271 ADGRF5Q8IZF2 1346 aa17.96■□□□□ 0.47
C4A-259ENST00000498271 DDX58O95786 925 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms