RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 KTN1Q86UP2 1357 aaKnown RBP15.78■□□□□ 0.12
CTTN-208ENST00000498223 NUTM2BA6NNL0 878 aaPredicted RBP15.78■□□□□ 0.12
CTTN-208ENST00000498223 NUTM2EB1AL46 878 aaPredicted RBP15.78■□□□□ 0.12
CTTN-208ENST00000498223 PAK3O75914 559 aaPredicted RBP15.78■□□□□ 0.12
CTTN-208ENST00000498223 NUTM2AQ8IVF1 878 aaPredicted RBP15.78■□□□□ 0.12
CTTN-208ENST00000498223 ZNF692Q9BU19 519 aaPredicted RBP15.78■□□□□ 0.12
CTTN-208ENST00000498223 PNPLA6Q8IY17 1366 aa15.77■□□□□ 0.12
CTTN-208ENST00000498223 LMOD2Q6P5Q4 547 aa15.77■□□□□ 0.12
CTTN-208ENST00000498223 POLR3AO14802 1390 aaPredicted RBP15.76■□□□□ 0.11
CTTN-208ENST00000498223 A0A1W2PP64 1363 aa15.75■□□□□ 0.11
CTTN-208ENST00000498223 ANKRD36BQ8N2N9 1353 aa15.75■□□□□ 0.11
CTTN-208ENST00000498223 SOS2Q07890 1332 aaPredicted RBP15.75■□□□□ 0.11
CTTN-208ENST00000498223 PANK3Q9H999 370 aa15.75■□□□□ 0.11
CTTN-208ENST00000498223 KIF20BQ96Q89 1820 aa15.75■□□□□ 0.11
CTTN-208ENST00000498223 TRPM3Q9HCF6 1732 aaPredicted RBP15.74■□□□□ 0.11
CTTN-208ENST00000498223 CPSF1Q10570 1443 aaKnown RBP15.74■□□□□ 0.11
CTTN-208ENST00000498223 CD163L1Q9NR16 1453 aa15.73■□□□□ 0.11
CTTN-208ENST00000498223 DDX10Q13206 875 aaKnown RBP15.73■□□□□ 0.11
CTTN-208ENST00000498223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.73■□□□□ 0.11
CTTN-208ENST00000498223 USP6P35125 1406 aa15.73■□□□□ 0.11
CTTN-208ENST00000498223 PXDNQ92626 1479 aa15.72■□□□□ 0.11
CTTN-208ENST00000498223 AFF2P51816 1311 aa15.72■□□□□ 0.11
CTTN-208ENST00000498223 PLEKHG5O94827 1062 aa15.72■□□□□ 0.11
CTTN-208ENST00000498223 NRKQ7Z2Y5 1582 aa15.71■□□□□ 0.11
CTTN-208ENST00000498223 RXRBP28702 533 aa15.71■□□□□ 0.11
CTTN-208ENST00000498223 EDC4Q6P2E9 1401 aaKnown RBP15.7■□□□□ 0.1
CTTN-208ENST00000498223 NSD3Q9BZ95 1437 aa15.7■□□□□ 0.1
CTTN-208ENST00000498223 ABTB2Q8N961 1025 aa15.7■□□□□ 0.1
CTTN-208ENST00000498223 C8orf37Q96NL8 207 aa15.7■□□□□ 0.1
CTTN-208ENST00000498223 KNSTRNQ9Y448 316 aa15.7■□□□□ 0.1
CTTN-208ENST00000498223 BRD4O60885 1362 aaPredicted RBP15.7■□□□□ 0.1
CTTN-208ENST00000498223 ALS2Q96Q42 1657 aa15.7■□□□□ 0.1
CTTN-208ENST00000498223 TTC21BQ7Z4L5 1316 aa15.69■□□□□ 0.1
CTTN-208ENST00000498223 CNGB1Q14028 1251 aaPredicted RBP15.69■□□□□ 0.1
CTTN-208ENST00000498223 NUTM2GQ5VZR2 741 aa15.69■□□□□ 0.1
CTTN-208ENST00000498223 SBNO1A3KN83 1393 aa15.69■□□□□ 0.1
CTTN-208ENST00000498223 CDK12Q9NYV4 1490 aaPredicted RBP15.69■□□□□ 0.1
CTTN-208ENST00000498223 TTC21AQ8NDW8 1320 aa15.68■□□□□ 0.1
CTTN-208ENST00000498223 TNS3Q68CZ2 1445 aa15.68■□□□□ 0.1
CTTN-208ENST00000498223 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
CTTN-208ENST00000498223 PIK3C2AO00443 1686 aa15.67■□□□□ 0.1
CTTN-208ENST00000498223 ADAMTS2O95450 1211 aa15.67■□□□□ 0.1
CTTN-208ENST00000498223 HAP1P54257 671 aaPredicted RBP15.67■□□□□ 0.1
CTTN-208ENST00000498223 CARD14Q9BXL6 1004 aa15.67■□□□□ 0.1
CTTN-208ENST00000498223 CGNL1Q0VF96 1302 aa15.67■□□□□ 0.1
CTTN-208ENST00000498223 ANKRD26Q9UPS8 1709 aa15.66■□□□□ 0.1
CTTN-208ENST00000498223 ARHGEF10O15013 1369 aa15.66■□□□□ 0.1
CTTN-208ENST00000498223 NLRP6P59044 892 aa15.66■□□□□ 0.1
CTTN-208ENST00000498223 NME9Q86XW9 330 aa15.66■□□□□ 0.1
CTTN-208ENST00000498223 NGLY1Q96IV0 654 aa15.66■□□□□ 0.1
CTTN-208ENST00000498223 NLRP13Q86W25 1043 aa15.65■□□□□ 0.1
CTTN-208ENST00000498223 RBM6P78332 1123 aaKnown RBP15.64■□□□□ 0.09
CTTN-208ENST00000498223 SSH2Q76I76 1423 aa15.64■□□□□ 0.09
CTTN-208ENST00000498223 QTRT2Q9H974 415 aaKnown RBP15.64■□□□□ 0.09
CTTN-208ENST00000498223 COG3Q96JB2 828 aa15.63■□□□□ 0.09
CTTN-208ENST00000498223 GGNBP2Q9H3C7 697 aa15.63■□□□□ 0.09
CTTN-208ENST00000498223 ZRANB1Q9UGI0 708 aa15.63■□□□□ 0.09
CTTN-208ENST00000498223 MARF1Q9Y4F3 1742 aaKnown RBP15.63■□□□□ 0.09
CTTN-208ENST00000498223 COL22A1Q8NFW1 1626 aaPredicted RBP15.62■□□□□ 0.09
CTTN-208ENST00000498223 MAP2P11137 1827 aaKnown RBP15.62■□□□□ 0.09
CTTN-208ENST00000498223 SOX12O15370 315 aa15.62■□□□□ 0.09
CTTN-208ENST00000498223 CC2D1BQ5T0F9 858 aaKnown RBP15.62■□□□□ 0.09
CTTN-208ENST00000498223 FNBP4Q8N3X1 1017 aaPredicted RBP15.62■□□□□ 0.09
CTTN-208ENST00000498223 UPF1Q92900 1129 aaKnown RBP eCLIP15.62■□□□□ 0.09
CTTN-208ENST00000498223 ABCA3Q99758 1704 aa15.62■□□□□ 0.09
CTTN-208ENST00000498223 PHRF1Q9P1Y6 1649 aaKnown RBP15.61■□□□□ 0.09
CTTN-208ENST00000498223 FYB1O15117 783 aa15.61■□□□□ 0.09
CTTN-208ENST00000498223 CABLES1Q8TDN4 633 aa15.61■□□□□ 0.09
CTTN-208ENST00000498223 PER1O15534 1290 aaPredicted RBP15.6■□□□□ 0.09
CTTN-208ENST00000498223 USP21Q9UK80 565 aa15.6■□□□□ 0.09
CTTN-208ENST00000498223 USP54Q70EL1 1684 aa15.6■□□□□ 0.09
CTTN-208ENST00000498223 CRYBG1Q9Y4K1 1723 aa15.6■□□□□ 0.09
CTTN-208ENST00000498223 RGS12O14924 1447 aa15.6■□□□□ 0.09
CTTN-208ENST00000498223 ZBTB7CA1YPR0 619 aa15.59■□□□□ 0.09
CTTN-208ENST00000498223 MORC1Q86VD1 984 aa15.59■□□□□ 0.09
CTTN-208ENST00000498223 TRPC5Q9UL62 973 aaPredicted RBP15.59■□□□□ 0.09
CTTN-208ENST00000498223 NSD2O96028 1365 aa15.59■□□□□ 0.09
CTTN-208ENST00000498223 LTN1O94822 1766 aa15.59■□□□□ 0.09
CTTN-208ENST00000498223 TNNT2P45379 298 aaPredicted RBP15.58■□□□□ 0.08
CTTN-208ENST00000498223 USP31Q70CQ4 1352 aa15.58■□□□□ 0.08
CTTN-208ENST00000498223 AMER1Q5JTC6 1135 aaPredicted RBP15.57■□□□□ 0.08
CTTN-208ENST00000498223 KCNH5Q8NCM2 988 aa15.56■□□□□ 0.08
CTTN-208ENST00000498223 OVOS2A0A0J9YW53 1432 aa15.56■□□□□ 0.08
CTTN-208ENST00000498223 ATRNO75882 1429 aa15.56■□□□□ 0.08
CTTN-208ENST00000498223 OVOS2Q6IE36 1432 aa15.56■□□□□ 0.08
CTTN-208ENST00000498223 RGPD5Q99666 1765 aa15.55■□□□□ 0.08
CTTN-208ENST00000498223 USP19O94966 1318 aa15.55■□□□□ 0.08
CTTN-208ENST00000498223 GCP02774 474 aa15.55■□□□□ 0.08
CTTN-208ENST00000498223 ZC3H6P61129 1189 aaKnown RBP15.55■□□□□ 0.08
CTTN-208ENST00000498223 SLIT3O75094 1523 aa15.54■□□□□ 0.08
CTTN-208ENST00000498223 BCL9LQ86UU0 1499 aa15.54■□□□□ 0.08
CTTN-208ENST00000498223 NPC1L1Q9UHC9 1359 aa15.53■□□□□ 0.08
CTTN-208ENST00000498223 PPM1GO15355 546 aaPredicted RBP15.51■□□□□ 0.07
CTTN-208ENST00000498223 FBLN1P23142 703 aa15.51■□□□□ 0.07
CTTN-208ENST00000498223 PRDM11Q9NQV5 511 aa15.51■□□□□ 0.07
CTTN-208ENST00000498223 ANP32CO43423 234 aa15.5■□□□□ 0.07
CTTN-208ENST00000498223 AMPHP49418 695 aa15.5■□□□□ 0.07
CTTN-208ENST00000498223 RRS1Q15050 365 aaKnown RBP15.5■□□□□ 0.07
CTTN-208ENST00000498223 COL14A1Q05707 1796 aaKnown RBP15.49■□□□□ 0.07
CTTN-208ENST00000498223 SLIT2O94813 1529 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms