RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 SPATA31A3Q5VYP0 1347 aa19.45■□□□□ 0.7
VPS26A-209ENST00000497564 C8orf37Q96NL8 207 aa19.44■□□□□ 0.7
VPS26A-209ENST00000497564 MON2Q7Z3U7 1717 aa19.44■□□□□ 0.7
VPS26A-209ENST00000497564 AFF2P51816 1311 aa19.44■□□□□ 0.7
VPS26A-209ENST00000497564 KTN1Q86UP2 1357 aaKnown RBP19.44■□□□□ 0.7
VPS26A-209ENST00000497564 NUDT16Q96DE0 195 aaKnown RBP19.43■□□□□ 0.7
VPS26A-209ENST00000497564 ANKRD36BQ8N2N9 1353 aa19.43■□□□□ 0.7
VPS26A-209ENST00000497564 ANKRD26Q9UPS8 1709 aa19.42■□□□□ 0.7
VPS26A-209ENST00000497564 PRKRIP1Q9H875 184 aaPredicted RBP19.42■□□□□ 0.7
VPS26A-209ENST00000497564 NPC1L1Q9UHC9 1359 aa19.42■□□□□ 0.7
VPS26A-209ENST00000497564 KIF20BQ96Q89 1820 aa19.41■□□□□ 0.7
VPS26A-209ENST00000497564 TNS3Q68CZ2 1445 aa19.41■□□□□ 0.7
VPS26A-209ENST00000497564 CD163L1Q9NR16 1453 aa19.41■□□□□ 0.7
VPS26A-209ENST00000497564 CCER2I3L3R5 266 aa19.4■□□□□ 0.7
VPS26A-209ENST00000497564 PLEKHG5O94827 1062 aa19.4■□□□□ 0.7
VPS26A-209ENST00000497564 PSME1Q06323 249 aa19.4■□□□□ 0.7
VPS26A-209ENST00000497564 SLC12A5Q9H2X9 1139 aa19.4■□□□□ 0.7
VPS26A-209ENST00000497564 TRPM3Q9HCF6 1732 aaPredicted RBP19.39■□□□□ 0.7
VPS26A-209ENST00000497564 SBNO1A3KN83 1393 aa19.38■□□□□ 0.69
VPS26A-209ENST00000497564 ZNF772Q68DY9 489 aaPredicted RBP19.38■□□□□ 0.69
VPS26A-209ENST00000497564 TMC1Q8TDI8 760 aa19.38■□□□□ 0.69
VPS26A-209ENST00000497564 CABLES1Q8TDN4 633 aa19.38■□□□□ 0.69
VPS26A-209ENST00000497564 PPIP5K1Q6PFW1 1433 aa19.37■□□□□ 0.69
VPS26A-209ENST00000497564 PARD3Q8TEW0 1356 aa19.37■□□□□ 0.69
VPS26A-209ENST00000497564 LMOD2Q6P5Q4 547 aa19.37■□□□□ 0.69
VPS26A-209ENST00000497564 NGDNQ8NEJ9 315 aaKnown RBP19.37■□□□□ 0.69
VPS26A-209ENST00000497564 NGLY1Q96IV0 654 aa19.37■□□□□ 0.69
VPS26A-209ENST00000497564 KNSTRNQ9Y448 316 aa19.37■□□□□ 0.69
VPS26A-209ENST00000497564 A0A1W2PP64 1363 aa19.36■□□□□ 0.69
VPS26A-209ENST00000497564 CPSF1Q10570 1443 aaKnown RBP19.35■□□□□ 0.69
VPS26A-209ENST00000497564 NSD3Q9BZ95 1437 aa19.35■□□□□ 0.69
VPS26A-209ENST00000497564 RALBP1Q15311 655 aa19.35■□□□□ 0.69
VPS26A-209ENST00000497564 AMER1Q5JTC6 1135 aaPredicted RBP19.35■□□□□ 0.69
VPS26A-209ENST00000497564 CARD14Q9BXL6 1004 aa19.35■□□□□ 0.69
VPS26A-209ENST00000497564 TERF2IPQ9NYB0 399 aa19.35■□□□□ 0.69
VPS26A-209ENST00000497564 CCDC61Q9Y6R9 512 aa19.35■□□□□ 0.69
VPS26A-209ENST00000497564 NRKQ7Z2Y5 1582 aa19.35■□□□□ 0.69
VPS26A-209ENST00000497564 ALS2Q96Q42 1657 aa19.34■□□□□ 0.69
VPS26A-209ENST00000497564 ABCA3Q99758 1704 aa19.34■□□□□ 0.69
VPS26A-209ENST00000497564 MARF1Q9Y4F3 1742 aaKnown RBP19.34■□□□□ 0.69
VPS26A-209ENST00000497564 ACEP12821 1306 aa19.32■□□□□ 0.68
VPS26A-209ENST00000497564 FNBP4Q8N3X1 1017 aaPredicted RBP19.32■□□□□ 0.68
VPS26A-209ENST00000497564 QTRT2Q9H974 415 aaKnown RBP19.32■□□□□ 0.68
VPS26A-209ENST00000497564 CABP1Q9NZU7 370 aa19.32■□□□□ 0.68
VPS26A-209ENST00000497564 POLR3AO14802 1390 aaPredicted RBP19.32■□□□□ 0.68
VPS26A-209ENST00000497564 ARHGEF10O15013 1369 aa19.32■□□□□ 0.68
VPS26A-209ENST00000497564 NSD2O96028 1365 aa19.32■□□□□ 0.68
VPS26A-209ENST00000497564 PLEKHG3A1L390 1219 aa19.31■□□□□ 0.68
VPS26A-209ENST00000497564 HDGFL2Q7Z4V5 671 aaPredicted RBP19.31■□□□□ 0.68
VPS26A-209ENST00000497564 USP21Q9UK80 565 aa19.31■□□□□ 0.68
VPS26A-209ENST00000497564 PAK3O75914 559 aaPredicted RBP19.3■□□□□ 0.68
VPS26A-209ENST00000497564 BCL9LQ86UU0 1499 aa19.29■□□□□ 0.68
VPS26A-209ENST00000497564 RXRBP28702 533 aa19.29■□□□□ 0.68
VPS26A-209ENST00000497564 EDC4Q6P2E9 1401 aaKnown RBP19.28■□□□□ 0.68
VPS26A-209ENST00000497564 CGNL1Q0VF96 1302 aa19.27■□□□□ 0.68
VPS26A-209ENST00000497564 MYBBP1AQ9BQG0 1328 aaKnown RBP19.27■□□□□ 0.68
VPS26A-209ENST00000497564 HAP1P54257 671 aaPredicted RBP19.27■□□□□ 0.68
VPS26A-209ENST00000497564 CRYBG1Q9Y4K1 1723 aa19.26■□□□□ 0.67
VPS26A-209ENST00000497564 CC2D1BQ5T0F9 858 aaKnown RBP19.26■□□□□ 0.67
VPS26A-209ENST00000497564 NUTM2GQ5VZR2 741 aa19.26■□□□□ 0.67
VPS26A-209ENST00000497564 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
VPS26A-209ENST00000497564 ATRNO75882 1429 aa19.25■□□□□ 0.67
VPS26A-209ENST00000497564 SLIT2O94813 1529 aa19.25■□□□□ 0.67
VPS26A-209ENST00000497564 USP54Q70EL1 1684 aa19.25■□□□□ 0.67
VPS26A-209ENST00000497564 RGS12O14924 1447 aa19.25■□□□□ 0.67
VPS26A-209ENST00000497564 RBM6P78332 1123 aaKnown RBP19.24■□□□□ 0.67
VPS26A-209ENST00000497564 BRD4O60885 1362 aaPredicted RBP19.23■□□□□ 0.67
VPS26A-209ENST00000497564 FAM83GA6ND36 823 aa19.23■□□□□ 0.67
VPS26A-209ENST00000497564 TRPC5Q9UL62 973 aaPredicted RBP19.23■□□□□ 0.67
VPS26A-209ENST00000497564 USP6P35125 1406 aa19.23■□□□□ 0.67
VPS26A-209ENST00000497564 CDK12Q9NYV4 1490 aaPredicted RBP19.22■□□□□ 0.67
VPS26A-209ENST00000497564 PLCH1Q4KWH8 1693 aa19.22■□□□□ 0.67
VPS26A-209ENST00000497564 SSH2Q76I76 1423 aa19.21■□□□□ 0.67
VPS26A-209ENST00000497564 NLRP13Q86W25 1043 aa19.21■□□□□ 0.67
VPS26A-209ENST00000497564 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.2■□□□□ 0.66
VPS26A-209ENST00000497564 UNC5CLQ8IV45 518 aa19.2■□□□□ 0.66
VPS26A-209ENST00000497564 PHRF1Q9P1Y6 1649 aaKnown RBP19.2■□□□□ 0.66
VPS26A-209ENST00000497564 EP400Q96L91 3159 aa19.2■□□□□ 0.66
VPS26A-209ENST00000497564 MAP2P11137 1827 aaKnown RBP19.2■□□□□ 0.66
VPS26A-209ENST00000497564 PIK3C2AO00443 1686 aa19.18■□□□□ 0.66
VPS26A-209ENST00000497564 FYB1O15117 783 aa19.18■□□□□ 0.66
VPS26A-209ENST00000497564 CNGB1Q14028 1251 aaPredicted RBP19.18■□□□□ 0.66
VPS26A-209ENST00000497564 ABTB2Q8N961 1025 aa19.18■□□□□ 0.66
VPS26A-209ENST00000497564 GLI3P10071 1580 aa19.18■□□□□ 0.66
VPS26A-209ENST00000497564 PPP2R1AP30153 589 aa19.17■□□□□ 0.66
VPS26A-209ENST00000497564 CCDC184Q52MB2 194 aa19.17■□□□□ 0.66
VPS26A-209ENST00000497564 GJD4Q96KN9 370 aaPredicted RBP19.16■□□□□ 0.66
VPS26A-209ENST00000497564 MRS2Q9HD23 443 aa19.16■□□□□ 0.66
VPS26A-209ENST00000497564 NWD2Q9ULI1 1742 aa19.16■□□□□ 0.66
VPS26A-209ENST00000497564 KIAA0232Q92628 1395 aa19.16■□□□□ 0.66
VPS26A-209ENST00000497564 NRAPQ86VF7 1730 aa19.15■□□□□ 0.66
VPS26A-209ENST00000497564 ZC3H6P61129 1189 aaKnown RBP19.15■□□□□ 0.66
VPS26A-209ENST00000497564 MORC1Q86VD1 984 aa19.15■□□□□ 0.66
VPS26A-209ENST00000497564 BTG4Q9NY30 223 aa19.15■□□□□ 0.66
VPS26A-209ENST00000497564 USP19O94966 1318 aa19.15■□□□□ 0.66
VPS26A-209ENST00000497564 TTC21BQ7Z4L5 1316 aa19.15■□□□□ 0.66
VPS26A-209ENST00000497564 TTC21AQ8NDW8 1320 aa19.15■□□□□ 0.66
VPS26A-209ENST00000497564 COL14A1Q05707 1796 aaKnown RBP19.14■□□□□ 0.66
VPS26A-209ENST00000497564 CHRNA2Q15822 529 aa19.14■□□□□ 0.65
VPS26A-209ENST00000497564 PRDM11Q9NQV5 511 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms