RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 TSC1Q92574 1164 aa9.8□□□□□ -0.84
SOX2-OT-216ENST00000497122 ATP13A2Q9NQ11 1180 aa9.8□□□□□ -0.84
SOX2-OT-216ENST00000497122 SH3BP2P78314 561 aa9.79□□□□□ -0.84
SOX2-OT-216ENST00000497122 BAP1Q92560 729 aa9.79□□□□□ -0.84
SOX2-OT-216ENST00000497122 KDM4CQ9H3R0 1056 aa9.79□□□□□ -0.84
SOX2-OT-216ENST00000497122 EVA1BQ9NVM1 165 aa9.79□□□□□ -0.84
SOX2-OT-216ENST00000497122 PCDHB15Q9Y5E8 787 aa9.79□□□□□ -0.84
SOX2-OT-216ENST00000497122 KCNH2Q12809 1159 aa9.78□□□□□ -0.84
SOX2-OT-216ENST00000497122 ZBTB3Q9H5J0 574 aa9.78□□□□□ -0.84
SOX2-OT-216ENST00000497122 RIC3Q7Z5B4 369 aa9.77□□□□□ -0.85
SOX2-OT-216ENST00000497122 CFAP99D6REC4 459 aa9.76□□□□□ -0.85
SOX2-OT-216ENST00000497122 PDE4DQ08499 809 aa9.76□□□□□ -0.85
SOX2-OT-216ENST00000497122 TRIM26Q12899 539 aaPredicted RBP9.76□□□□□ -0.85
SOX2-OT-216ENST00000497122 CABLES1Q8TDN4 633 aa9.76□□□□□ -0.85
SOX2-OT-216ENST00000497122 TLL2Q9Y6L7 1015 aa9.76□□□□□ -0.85
SOX2-OT-216ENST00000497122 NUTM2BA6NNL0 878 aaPredicted RBP9.75□□□□□ -0.85
SOX2-OT-216ENST00000497122 NUTM2EB1AL46 878 aaPredicted RBP9.75□□□□□ -0.85
SOX2-OT-216ENST00000497122 SPTLC1O15269 473 aa9.75□□□□□ -0.85
SOX2-OT-216ENST00000497122 HRCP23327 699 aa9.75□□□□□ -0.85
SOX2-OT-216ENST00000497122 GJA5P36382 358 aa9.75□□□□□ -0.85
SOX2-OT-216ENST00000497122 NUTM2DQ5VT03 806 aaPredicted RBP9.75□□□□□ -0.85
SOX2-OT-216ENST00000497122 DESI1Q6ICB0 168 aa9.75□□□□□ -0.85
SOX2-OT-216ENST00000497122 NUTM2AQ8IVF1 878 aaPredicted RBP9.75□□□□□ -0.85
SOX2-OT-216ENST00000497122 ZNF511Q8NB15 262 aa9.75□□□□□ -0.85
SOX2-OT-216ENST00000497122 SENP2Q9HC62 589 aa9.75□□□□□ -0.85
SOX2-OT-216ENST00000497122 SNRPBP14678 240 aaKnown RBP9.74□□□□□ -0.85
SOX2-OT-216ENST00000497122 TREML4Q6UXN2 200 aa9.74□□□□□ -0.85
SOX2-OT-216ENST00000497122 SIAH2O43255 324 aa9.73□□□□□ -0.85
SOX2-OT-216ENST00000497122 CAPN5O15484 640 aaPredicted RBP9.72□□□□□ -0.85
SOX2-OT-216ENST00000497122 BMP1P13497 986 aa9.72□□□□□ -0.85
SOX2-OT-216ENST00000497122 AGERQ15109 404 aa9.72□□□□□ -0.85
SOX2-OT-216ENST00000497122 LYPD8Q6UX82 237 aa9.72□□□□□ -0.85
SOX2-OT-216ENST00000497122 TRIM47Q96LD4 638 aa9.72□□□□□ -0.85
SOX2-OT-216ENST00000497122 MAP10Q9P2G4 905 aa9.72□□□□□ -0.85
SOX2-OT-216ENST00000497122 WFS1O76024 890 aa9.71□□□□□ -0.86
SOX2-OT-216ENST00000497122 MYSM1Q5VVJ2 828 aa9.71□□□□□ -0.86
SOX2-OT-216ENST00000497122 PRPF38BQ5VTL8 546 aaKnown RBP9.7□□□□□ -0.86
SOX2-OT-216ENST00000497122 KIFC2Q96AC6 838 aa9.7□□□□□ -0.86
SOX2-OT-216ENST00000497122 LIMD1Q9UGP4 676 aa9.7□□□□□ -0.86
SOX2-OT-216ENST00000497122 PLEKHG3A1L390 1219 aa9.69□□□□□ -0.86
SOX2-OT-216ENST00000497122 VARSP26640 1264 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-216ENST00000497122 ARID5BQ14865 1188 aa9.69□□□□□ -0.86
SOX2-OT-216ENST00000497122 QPCTQ16769 361 aa9.69□□□□□ -0.86
SOX2-OT-216ENST00000497122 NNTQ13423 1086 aa9.68□□□□□ -0.86
SOX2-OT-216ENST00000497122 ATP1B4Q9UN42 357 aaPredicted RBP9.68□□□□□ -0.86
SOX2-OT-216ENST00000497122 ARID3CA6NKF2 412 aa9.67□□□□□ -0.86
SOX2-OT-216ENST00000497122 PER1O15534 1290 aaPredicted RBP9.67□□□□□ -0.86
SOX2-OT-216ENST00000497122 FAM174AQ8TBP5 190 aa9.67□□□□□ -0.86
SOX2-OT-216ENST00000497122 FOXJ1Q92949 421 aa9.66□□□□□ -0.86
SOX2-OT-216ENST00000497122 POLR3EQ9NVU0 708 aa9.66□□□□□ -0.86
SOX2-OT-216ENST00000497122 CLK2P49760 499 aaKnown RBP9.65□□□□□ -0.86
SOX2-OT-216ENST00000497122 HELBQ8NG08 1087 aaPredicted RBP9.65□□□□□ -0.86
SOX2-OT-216ENST00000497122 F12P00748 615 aaPredicted RBP9.64□□□□□ -0.87
SOX2-OT-216ENST00000497122 FAM117AQ9C073 453 aa9.64□□□□□ -0.87
SOX2-OT-216ENST00000497122 WDR4P57081 412 aaKnown RBP9.63□□□□□ -0.87
SOX2-OT-216ENST00000497122 NFX1Q12986 1120 aaKnown RBP9.63□□□□□ -0.87
SOX2-OT-216ENST00000497122 TRIM46Q7Z4K8 759 aa9.63□□□□□ -0.87
SOX2-OT-216ENST00000497122 NPM2Q86SE8 214 aaKnown RBP9.63□□□□□ -0.87
SOX2-OT-216ENST00000497122 C1orf115Q9H7X2 142 aa9.63□□□□□ -0.87
SOX2-OT-216ENST00000497122 APBB1O00213 710 aa9.62□□□□□ -0.87
SOX2-OT-216ENST00000497122 TERTO14746 1132 aaKnown RBP9.62□□□□□ -0.87
SOX2-OT-216ENST00000497122 LILRB3O75022 631 aa9.62□□□□□ -0.87
SOX2-OT-216ENST00000497122 ADH1CP00326 375 aa9.62□□□□□ -0.87
SOX2-OT-216ENST00000497122 RTL5Q5HYW3 569 aaPredicted RBP9.62□□□□□ -0.87
SOX2-OT-216ENST00000497122 LCE2AQ5TA79 106 aaPredicted RBP9.61□□□□□ -0.87
SOX2-OT-216ENST00000497122 BPHLQ86WA6 291 aaPredicted RBP9.61□□□□□ -0.87
SOX2-OT-216ENST00000497122 ZFP42Q96MM3 310 aa9.6□□□□□ -0.87
SOX2-OT-216ENST00000497122 MAGEB6P1A0A0J9YX57 407 aa9.59□□□□□ -0.87
SOX2-OT-216ENST00000497122 ARMC2Q8NEN0 867 aa9.59□□□□□ -0.87
SOX2-OT-216ENST00000497122 SCARF1Q14162 830 aa9.58□□□□□ -0.88
SOX2-OT-216ENST00000497122 TUSC1Q2TAM9 212 aa9.58□□□□□ -0.88
SOX2-OT-216ENST00000497122 NBPF14Q5TI25 921 aa9.58□□□□□ -0.88
SOX2-OT-216ENST00000497122 MPNDQ8N594 471 aa9.58□□□□□ -0.88
SOX2-OT-216ENST00000497122 DDRGK1Q96HY6 314 aa9.58□□□□□ -0.88
SOX2-OT-216ENST00000497122 PURBQ96QR8 312 aaKnown RBP9.58□□□□□ -0.88
SOX2-OT-216ENST00000497122 CARD14Q9BXL6 1004 aa9.58□□□□□ -0.88
SOX2-OT-216ENST00000497122 TIMP2P16035 220 aa9.57□□□□□ -0.88
SOX2-OT-216ENST00000497122 VEGFBP49765 207 aa9.57□□□□□ -0.88
SOX2-OT-216ENST00000497122 C4orf48Q5BLP8 95 aa9.57□□□□□ -0.88
SOX2-OT-216ENST00000497122 MRPL14Q6P1L8 145 aaKnown RBP9.57□□□□□ -0.88
SOX2-OT-216ENST00000497122 SLC16A10Q8TF71 515 aa9.57□□□□□ -0.88
SOX2-OT-216ENST00000497122 ZIC2O95409 532 aaPredicted RBP9.56□□□□□ -0.88
SOX2-OT-216ENST00000497122 FLIIQ13045 1269 aa9.56□□□□□ -0.88
SOX2-OT-216ENST00000497122 C6orf118Q5T5N4 469 aa9.55□□□□□ -0.88
SOX2-OT-216ENST00000497122 ZFAND3Q9H8U3 227 aa9.55□□□□□ -0.88
SOX2-OT-216ENST00000497122 NXF1Q9UBU9 619 aaKnown RBP9.55□□□□□ -0.88
SOX2-OT-216ENST00000497122 NR3C2P08235 984 aa9.54□□□□□ -0.88
SOX2-OT-216ENST00000497122 FSHRP23945 695 aa9.54□□□□□ -0.88
SOX2-OT-216ENST00000497122 VASH1Q7L8A9 365 aaPredicted RBP9.54□□□□□ -0.88
SOX2-OT-216ENST00000497122 ITPKCQ96DU7 683 aa9.54□□□□□ -0.88
SOX2-OT-216ENST00000497122 CDK15Q96Q40 435 aa9.54□□□□□ -0.88
SOX2-OT-216ENST00000497122 PDIA4P13667 645 aaKnown RBP9.53□□□□□ -0.88
SOX2-OT-216ENST00000497122 INSM1Q01101 510 aaPredicted RBP9.53□□□□□ -0.88
SOX2-OT-216ENST00000497122 CTDSPL2Q05D32 466 aa9.53□□□□□ -0.88
SOX2-OT-216ENST00000497122 NR5A1Q13285 461 aa9.53□□□□□ -0.88
SOX2-OT-216ENST00000497122 ZBTB7CA1YPR0 619 aa9.52□□□□□ -0.89
SOX2-OT-216ENST00000497122 SOBPA7XYQ1 873 aa9.52□□□□□ -0.89
SOX2-OT-216ENST00000497122 UPP2O95045 317 aa9.52□□□□□ -0.89
SOX2-OT-216ENST00000497122 LCE2CQ5TA81 110 aa9.51□□□□□ -0.89
SOX2-OT-216ENST00000497122 LRRN4Q8WUT4 740 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms