RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 ACEP12821 1306 aa20.16■□□□□ 0.82
COL15A1-204ENST00000496686 ZNF521Q96K83 1311 aa20.16■□□□□ 0.82
COL15A1-204ENST00000496686 RNF123Q5XPI4 1314 aa20.15■□□□□ 0.82
COL15A1-204ENST00000496686 NCKAP5LQ9HCH0 1330 aa20.15■□□□□ 0.82
COL15A1-204ENST00000496686 SSH2Q76I76 1423 aa20.15■□□□□ 0.82
COL15A1-204ENST00000496686 ADGRL3Q9HAR2 1447 aa20.15■□□□□ 0.82
COL15A1-204ENST00000496686 TTC21BQ7Z4L5 1316 aa20.14■□□□□ 0.81
COL15A1-204ENST00000496686 TTC21AQ8NDW8 1320 aa20.14■□□□□ 0.81
COL15A1-204ENST00000496686 RUNDC1Q96C34 613 aa20.13■□□□□ 0.81
COL15A1-204ENST00000496686 COG3Q96JB2 828 aa20.13■□□□□ 0.81
COL15A1-204ENST00000496686 NALCNQ8IZF0 1738 aa20.13■□□□□ 0.81
COL15A1-204ENST00000496686 IQSEC2Q5JU85 1478 aa20.12■□□□□ 0.81
COL15A1-204ENST00000496686 NME9Q86XW9 330 aa20.12■□□□□ 0.81
COL15A1-204ENST00000496686 CDK12Q9NYV4 1490 aaPredicted RBP20.11■□□□□ 0.81
COL15A1-204ENST00000496686 OVOS2A0A0J9YW53 1432 aa20.11■□□□□ 0.81
COL15A1-204ENST00000496686 OVOS2Q6IE36 1432 aa20.11■□□□□ 0.81
COL15A1-204ENST00000496686 APAF1O14727 1248 aa20.1■□□□□ 0.81
COL15A1-204ENST00000496686 CCDC146Q8IYE0 955 aa20.1■□□□□ 0.81
COL15A1-204ENST00000496686 SALL2Q9Y467 1007 aaPredicted RBP20.1■□□□□ 0.81
COL15A1-204ENST00000496686 POLKQ9UBT6 870 aa20.09■□□□□ 0.81
COL15A1-204ENST00000496686 DIAPH1O60610 1272 aaKnown RBP20.08■□□□□ 0.81
COL15A1-204ENST00000496686 GOLGA2Q08379 1002 aa20.08■□□□□ 0.81
COL15A1-204ENST00000496686 USP31Q70CQ4 1352 aa20.08■□□□□ 0.8
COL15A1-204ENST00000496686 LRRC7Q96NW7 1537 aa20.07■□□□□ 0.8
COL15A1-204ENST00000496686 SENP3-EIF4A1A0A087X0R7 540 aa20.07■□□□□ 0.8
COL15A1-204ENST00000496686 PNNQ9H307 717 aaKnown RBP20.07■□□□□ 0.8
COL15A1-204ENST00000496686 U2AF1L5P0DN76 240 aaPredicted RBP20.06■□□□□ 0.8
COL15A1-204ENST00000496686 U2AF1Q01081 240 aaKnown RBP eCLIP20.06■□□□□ 0.8
COL15A1-204ENST00000496686 NGDNQ8NEJ9 315 aaKnown RBP20.06■□□□□ 0.8
COL15A1-204ENST00000496686 NUTM2FA1L443 756 aa20.05■□□□□ 0.8
COL15A1-204ENST00000496686 CCDC27Q2M243 656 aa20.05■□□□□ 0.8
COL15A1-204ENST00000496686 CDCA7LQ96GN5 454 aa20.05■□□□□ 0.8
COL15A1-204ENST00000496686 NCOA3Q9Y6Q9 1424 aa20.04■□□□□ 0.8
COL15A1-204ENST00000496686 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
COL15A1-204ENST00000496686 USP54Q70EL1 1684 aa20.03■□□□□ 0.8
COL15A1-204ENST00000496686 SLFN5Q08AF3 891 aa20.03■□□□□ 0.8
COL15A1-204ENST00000496686 TRMT2AQ8IZ69 625 aaKnown RBP20.03■□□□□ 0.8
COL15A1-204ENST00000496686 RCAN3Q9UKA8 241 aa20.03■□□□□ 0.8
COL15A1-204ENST00000496686 E9PSI1 815 aa20.02■□□□□ 0.8
COL15A1-204ENST00000496686 PMFBP1Q8TBY8 1022 aa20.02■□□□□ 0.8
COL15A1-204ENST00000496686 ZRANB1Q9UGI0 708 aa20.02■□□□□ 0.8
COL15A1-204ENST00000496686 RGPD8O14715 1765 aaPredicted RBP20.01■□□□□ 0.79
COL15A1-204ENST00000496686 DUSP27Q5VZP5 1158 aa20.01■□□□□ 0.79
COL15A1-204ENST00000496686 TCP11L2Q8N4U5 519 aa20.01■□□□□ 0.79
COL15A1-204ENST00000496686 KDM4FA0A1W2PPD8 638 aa20■□□□□ 0.79
COL15A1-204ENST00000496686 U2SURPO15042 1029 aaKnown RBP20■□□□□ 0.79
COL15A1-204ENST00000496686 PLEKHF1Q96S99 279 aa20■□□□□ 0.79
COL15A1-204ENST00000496686 PHF8Q9UPP1 1060 aa20■□□□□ 0.79
COL15A1-204ENST00000496686 MAP2P11137 1827 aaKnown RBP19.99■□□□□ 0.79
COL15A1-204ENST00000496686 FCHSD2O94868 740 aa19.99■□□□□ 0.79
COL15A1-204ENST00000496686 WDR63Q8IWG1 891 aa19.99■□□□□ 0.79
COL15A1-204ENST00000496686 WWC1Q8IX03 1113 aa19.99■□□□□ 0.79
COL15A1-204ENST00000496686 PELP1Q8IZL8 1130 aaKnown RBP19.99■□□□□ 0.79
COL15A1-204ENST00000496686 EMILIN1Q9Y6C2 1016 aa19.99■□□□□ 0.79
COL15A1-204ENST00000496686 DCCP43146 1447 aa19.98■□□□□ 0.79
COL15A1-204ENST00000496686 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
COL15A1-204ENST00000496686 LMTK3Q96Q04 1460 aa19.98■□□□□ 0.79
COL15A1-204ENST00000496686 PIK3C2AO00443 1686 aa19.97■□□□□ 0.79
COL15A1-204ENST00000496686 IL13P35225 146 aa19.97■□□□□ 0.79
COL15A1-204ENST00000496686 RRP1P56182 461 aaKnown RBP19.97■□□□□ 0.79
COL15A1-204ENST00000496686 PROSER2Q86WR7 435 aaPredicted RBP19.97■□□□□ 0.79
COL15A1-204ENST00000496686 PPP4R2Q9NY27 417 aa19.96■□□□□ 0.79
COL15A1-204ENST00000496686 KIF24Q5T7B8 1368 aa19.95■□□□□ 0.79
COL15A1-204ENST00000496686 PPM1GO15355 546 aaPredicted RBP19.95■□□□□ 0.78
COL15A1-204ENST00000496686 C14orf37Q86TY3 774 aa19.95■□□□□ 0.78
COL15A1-204ENST00000496686 RSPH6AQ9H0K4 717 aa19.94■□□□□ 0.78
COL15A1-204ENST00000496686 IRX6P78412 446 aaPredicted RBP19.93■□□□□ 0.78
COL15A1-204ENST00000496686 RRS1Q15050 365 aaKnown RBP19.93■□□□□ 0.78
COL15A1-204ENST00000496686 C19orf44Q9H6X5 657 aa19.93■□□□□ 0.78
COL15A1-204ENST00000496686 KIF1AQ12756 1690 aa19.93■□□□□ 0.78
COL15A1-204ENST00000496686 NEFMP07197 916 aa19.92■□□□□ 0.78
COL15A1-204ENST00000496686 FBLN1P23142 703 aa19.92■□□□□ 0.78
COL15A1-204ENST00000496686 TMPOP42166 694 aaKnown RBP19.92■□□□□ 0.78
COL15A1-204ENST00000496686 SBNO1A3KN83 1393 aa19.92■□□□□ 0.78
COL15A1-204ENST00000496686 RRP7AQ9Y3A4 280 aaKnown RBP19.9■□□□□ 0.78
COL15A1-204ENST00000496686 IL16Q14005 1332 aa19.9■□□□□ 0.78
COL15A1-204ENST00000496686 FLT4P35916 1363 aa19.9■□□□□ 0.78
COL15A1-204ENST00000496686 C1orf167Q5SNV9 1468 aa19.9■□□□□ 0.78
COL15A1-204ENST00000496686 HSPA2P54652 639 aa19.89■□□□□ 0.77
COL15A1-204ENST00000496686 TMEM94Q12767 1356 aa19.89■□□□□ 0.77
COL15A1-204ENST00000496686 ESCO1Q5FWF5 840 aa19.89■□□□□ 0.77
COL15A1-204ENST00000496686 RBM33Q96EV2 1170 aaKnown RBP19.89■□□□□ 0.77
COL15A1-204ENST00000496686 PEAK1Q9H792 1746 aa19.89■□□□□ 0.77
COL15A1-204ENST00000496686 SPINK5Q9NQ38 1064 aaPredicted RBP19.89■□□□□ 0.77
COL15A1-204ENST00000496686 MARF1Q9Y4F3 1742 aaKnown RBP19.89■□□□□ 0.77
COL15A1-204ENST00000496686 PRKAR2BP31323 418 aa19.88■□□□□ 0.77
COL15A1-204ENST00000496686 NLRP6P59044 892 aa19.88■□□□□ 0.77
COL15A1-204ENST00000496686 MYH16Q9H6N6 1097 aa19.88■□□□□ 0.77
COL15A1-204ENST00000496686 STRCP1A6NGW2 1772 aa19.88■□□□□ 0.77
COL15A1-204ENST00000496686 RTL1A6NKG5 1358 aa19.87■□□□□ 0.77
COL15A1-204ENST00000496686 MAP3K19Q56UN5 1328 aa19.87■□□□□ 0.77
COL15A1-204ENST00000496686 EIF4A2Q14240 407 aaKnown RBP19.87■□□□□ 0.77
COL15A1-204ENST00000496686 NEUROD2Q15784 382 aa19.87■□□□□ 0.77
COL15A1-204ENST00000496686 DMRT2Q9Y5R5 561 aa19.87■□□□□ 0.77
COL15A1-204ENST00000496686 MST1RQ04912 1400 aa19.86■□□□□ 0.77
COL15A1-204ENST00000496686 ARHGEF10O15013 1369 aa19.86■□□□□ 0.77
COL15A1-204ENST00000496686 PSME1Q06323 249 aa19.86■□□□□ 0.77
COL15A1-204ENST00000496686 ABTB2Q8N961 1025 aa19.86■□□□□ 0.77
COL15A1-204ENST00000496686 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.86■□□□□ 0.77
COL15A1-204ENST00000496686 STRCQ7RTU9 1775 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms