RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 AFF2P51816 1311 aa10.67□□□□□ -0.7
CDHR3-214ENST00000496633 ADAMTS2O95450 1211 aa10.67□□□□□ -0.7
CDHR3-214ENST00000496633 RXRBP28702 533 aa10.67□□□□□ -0.7
CDHR3-214ENST00000496633 TRPC5Q9UL62 973 aaPredicted RBP10.67□□□□□ -0.7
CDHR3-214ENST00000496633 CDK12Q9NYV4 1490 aaPredicted RBP10.67□□□□□ -0.7
CDHR3-214ENST00000496633 MARF1Q9Y4F3 1742 aaKnown RBP10.67□□□□□ -0.7
CDHR3-214ENST00000496633 RBM6P78332 1123 aaKnown RBP10.66□□□□□ -0.7
CDHR3-214ENST00000496633 CABP2Q9NPB3 220 aa10.66□□□□□ -0.7
CDHR3-214ENST00000496633 RGS17Q9UGC6 210 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-214ENST00000496633 USP21Q9UK80 565 aa10.66□□□□□ -0.7
CDHR3-214ENST00000496633 TRPM3Q9HCF6 1732 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-214ENST00000496633 TMF1P82094 1093 aa10.65□□□□□ -0.7
CDHR3-214ENST00000496633 ILDR2Q71H61 639 aa10.65□□□□□ -0.7
CDHR3-214ENST00000496633 HDGFL2Q7Z4V5 671 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-214ENST00000496633 NLRP13Q86W25 1043 aa10.65□□□□□ -0.7
CDHR3-214ENST00000496633 ALS2Q96Q42 1657 aa10.65□□□□□ -0.7
CDHR3-214ENST00000496633 TTC21AQ8NDW8 1320 aa10.64□□□□□ -0.71
CDHR3-214ENST00000496633 PPP4R3CPQ6ZMV5 832 aa10.64□□□□□ -0.71
CDHR3-214ENST00000496633 ABTB2Q8N961 1025 aa10.64□□□□□ -0.71
CDHR3-214ENST00000496633 QTRT2Q9H974 415 aaKnown RBP10.64□□□□□ -0.71
CDHR3-214ENST00000496633 TERF2IPQ9NYB0 399 aa10.64□□□□□ -0.71
CDHR3-214ENST00000496633 CABP1Q9NZU7 370 aa10.64□□□□□ -0.71
CDHR3-214ENST00000496633 POTEAQ6S8J7 498 aa10.63□□□□□ -0.71
CDHR3-214ENST00000496633 USP47Q96K76 1375 aa10.63□□□□□ -0.71
CDHR3-214ENST00000496633 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.62□□□□□ -0.71
CDHR3-214ENST00000496633 NWD2Q9ULI1 1742 aa10.62□□□□□ -0.71
CDHR3-214ENST00000496633 USP6P35125 1406 aa10.62□□□□□ -0.71
CDHR3-214ENST00000496633 ST20-MTHFSA0A0A6YYL1 179 aa10.62□□□□□ -0.71
CDHR3-214ENST00000496633 UNC5CLQ8IV45 518 aa10.62□□□□□ -0.71
CDHR3-214ENST00000496633 KCNH5Q8NCM2 988 aa10.61□□□□□ -0.71
CDHR3-214ENST00000496633 SLIT2O94813 1529 aa10.61□□□□□ -0.71
CDHR3-214ENST00000496633 COL14A1Q05707 1796 aaKnown RBP10.6□□□□□ -0.71
CDHR3-214ENST00000496633 TMC1Q8TDI8 760 aa10.6□□□□□ -0.71
CDHR3-214ENST00000496633 TESK2Q96S53 571 aa10.6□□□□□ -0.71
CDHR3-214ENST00000496633 ABCA3Q99758 1704 aa10.6□□□□□ -0.71
CDHR3-214ENST00000496633 KTN1Q86UP2 1357 aaKnown RBP10.6□□□□□ -0.71
CDHR3-214ENST00000496633 ATRNO75882 1429 aa10.59□□□□□ -0.71
CDHR3-214ENST00000496633 CPSF1Q10570 1443 aaKnown RBP10.59□□□□□ -0.71
CDHR3-214ENST00000496633 EIF4G2P78344 907 aaKnown RBP eCLIP10.59□□□□□ -0.71
CDHR3-214ENST00000496633 GJD4Q96KN9 370 aaPredicted RBP10.59□□□□□ -0.71
CDHR3-214ENST00000496633 PRDM11Q9NQV5 511 aa10.59□□□□□ -0.71
CDHR3-214ENST00000496633 AKAP12Q02952 1782 aa10.59□□□□□ -0.71
CDHR3-214ENST00000496633 USP19O94966 1318 aa10.58□□□□□ -0.71
CDHR3-214ENST00000496633 BCL9LQ86UU0 1499 aa10.58□□□□□ -0.72
CDHR3-214ENST00000496633 CPDO75976 1380 aa10.58□□□□□ -0.72
CDHR3-214ENST00000496633 NLRP6P59044 892 aa10.58□□□□□ -0.72
CDHR3-214ENST00000496633 VPS72Q15906 364 aa10.58□□□□□ -0.72
CDHR3-214ENST00000496633 CABLES1Q8TDN4 633 aa10.58□□□□□ -0.72
CDHR3-214ENST00000496633 EDC4Q6P2E9 1401 aaKnown RBP10.58□□□□□ -0.72
CDHR3-214ENST00000496633 SSH2Q76I76 1423 aa10.58□□□□□ -0.72
CDHR3-214ENST00000496633 TTC21BQ7Z4L5 1316 aa10.58□□□□□ -0.72
CDHR3-214ENST00000496633 GCP02774 474 aa10.57□□□□□ -0.72
CDHR3-214ENST00000496633 PHRF1Q9P1Y6 1649 aaKnown RBP10.56□□□□□ -0.72
CDHR3-214ENST00000496633 FAM83GA6ND36 823 aa10.56□□□□□ -0.72
CDHR3-214ENST00000496633 BTG4Q9NY30 223 aa10.56□□□□□ -0.72
CDHR3-214ENST00000496633 CCDC9Q9Y3X0 531 aaKnown RBP10.56□□□□□ -0.72
CDHR3-214ENST00000496633 PLCH1Q4KWH8 1693 aa10.56□□□□□ -0.72
CDHR3-214ENST00000496633 MON2Q7Z3U7 1717 aa10.55□□□□□ -0.72
CDHR3-214ENST00000496633 CRYBG1Q9Y4K1 1723 aa10.55□□□□□ -0.72
CDHR3-214ENST00000496633 ANKRD36BQ8N2N9 1353 aa10.55□□□□□ -0.72
CDHR3-214ENST00000496633 KIAA0232Q92628 1395 aa10.55□□□□□ -0.72
CDHR3-214ENST00000496633 EVA1CP58658 441 aa10.55□□□□□ -0.72
CDHR3-214ENST00000496633 USP31Q70CQ4 1352 aa10.54□□□□□ -0.72
CDHR3-214ENST00000496633 SLIT3O75094 1523 aa10.54□□□□□ -0.72
CDHR3-214ENST00000496633 ABCC6O95255 1503 aa10.54□□□□□ -0.72
CDHR3-214ENST00000496633 C11orf95C9JLR9 678 aaPredicted RBP10.54□□□□□ -0.72
CDHR3-214ENST00000496633 CCDC125Q86Z20 511 aa10.54□□□□□ -0.72
CDHR3-214ENST00000496633 SLC12A5Q9H2X9 1139 aa10.54□□□□□ -0.72
CDHR3-214ENST00000496633 AATKQ6ZMQ8 1374 aa10.53□□□□□ -0.72
CDHR3-214ENST00000496633 NRKQ7Z2Y5 1582 aa10.53□□□□□ -0.72
CDHR3-214ENST00000496633 ONECUT3O60422 494 aaPredicted RBP10.53□□□□□ -0.72
CDHR3-214ENST00000496633 PLEKHG5O94827 1062 aa10.53□□□□□ -0.72
CDHR3-214ENST00000496633 ZC3H6P61129 1189 aaKnown RBP10.53□□□□□ -0.72
CDHR3-214ENST00000496633 NUTM2GQ5VZR2 741 aa10.53□□□□□ -0.72
CDHR3-214ENST00000496633 THRAP3Q9Y2W1 955 aaKnown RBP10.53□□□□□ -0.72
CDHR3-214ENST00000496633 A0A1W2PP64 1363 aa10.52□□□□□ -0.72
CDHR3-214ENST00000496633 ZBTB22O15209 634 aa10.52□□□□□ -0.73
CDHR3-214ENST00000496633 PIK3C2AO00443 1686 aa10.52□□□□□ -0.73
CDHR3-214ENST00000496633 USP54Q70EL1 1684 aa10.52□□□□□ -0.73
CDHR3-214ENST00000496633 RGS12O14924 1447 aa10.51□□□□□ -0.73
CDHR3-214ENST00000496633 CD163L1Q9NR16 1453 aa10.51□□□□□ -0.73
CDHR3-214ENST00000496633 NRAPQ86VF7 1730 aa10.51□□□□□ -0.73
CDHR3-214ENST00000496633 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.51□□□□□ -0.73
CDHR3-214ENST00000496633 COG3Q96JB2 828 aa10.51□□□□□ -0.73
CDHR3-214ENST00000496633 SPATA31A5Q5VU36 1347 aa10.51□□□□□ -0.73
CDHR3-214ENST00000496633 SPATA31A7Q8IWB4 1347 aa10.51□□□□□ -0.73
CDHR3-214ENST00000496633 CDCA7Q9BWT1 371 aaPredicted RBP10.5□□□□□ -0.73
CDHR3-214ENST00000496633 A0A0G2JS52 829 aa10.49□□□□□ -0.73
CDHR3-214ENST00000496633 NPM3O75607 178 aaKnown RBP10.49□□□□□ -0.73
CDHR3-214ENST00000496633 MYT1Q01538 1121 aa10.49□□□□□ -0.73
CDHR3-214ENST00000496633 BARGINQ6ZT62 677 aa10.49□□□□□ -0.73
CDHR3-214ENST00000496633 ARHGEF25Q86VW2 580 aa10.49□□□□□ -0.73
CDHR3-214ENST00000496633 SPATA31A1Q5TZJ5 1347 aa10.49□□□□□ -0.73
CDHR3-214ENST00000496633 GLI3P10071 1580 aa10.48□□□□□ -0.73
CDHR3-214ENST00000496633 LMO7Q8WWI1 1683 aa10.48□□□□□ -0.73
CDHR3-214ENST00000496633 HSPA5P11021 654 aaKnown RBP10.48□□□□□ -0.73
CDHR3-214ENST00000496633 CHRNA2Q15822 529 aa10.48□□□□□ -0.73
CDHR3-214ENST00000496633 SEPT12Q8IYM1 358 aa10.48□□□□□ -0.73
CDHR3-214ENST00000496633 TCP11L2Q8N4U5 519 aa10.48□□□□□ -0.73
CDHR3-214ENST00000496633 STRN4Q9NRL3 753 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms