RNA–Protein interactions for RNA: ENST00000496627.5

GCOM1-212, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 2,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-212ENST00000496627 PLEKHF1Q96S99 279 aa18.85■□□□□ 0.61
GCOM1-212ENST00000496627 FTSJ3Q8IY81 847 aaKnown RBP18.84■□□□□ 0.61
GCOM1-212ENST00000496627 TSR2Q969E8 191 aaKnown RBP18.84■□□□□ 0.61
GCOM1-212ENST00000496627 NLRP1Q9C000 1473 aa18.84■□□□□ 0.61
GCOM1-212ENST00000496627 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.61
GCOM1-212ENST00000496627 MVPQ14764 893 aaKnown RBP18.83■□□□□ 0.6
GCOM1-212ENST00000496627 CDK19Q9BWU1 502 aa18.82■□□□□ 0.6
GCOM1-212ENST00000496627 NFKBIBQ15653 356 aa18.82■□□□□ 0.6
GCOM1-212ENST00000496627 DZIP1LQ8IYY4 767 aaKnown RBP18.82■□□□□ 0.6
GCOM1-212ENST00000496627 SMC4Q9NTJ3 1288 aa18.82■□□□□ 0.6
GCOM1-212ENST00000496627 ARHGEF40Q8TER5 1519 aa18.82■□□□□ 0.6
GCOM1-212ENST00000496627 EXOSC9Q06265 439 aaKnown RBP18.81■□□□□ 0.6
GCOM1-212ENST00000496627 DIAPH1O60610 1272 aaKnown RBP18.81■□□□□ 0.6
GCOM1-212ENST00000496627 TRIM35Q9UPQ4 493 aa18.81■□□□□ 0.6
GCOM1-212ENST00000496627 PNNQ9H307 717 aaKnown RBP18.8■□□□□ 0.6
GCOM1-212ENST00000496627 PDZRN3Q9UPQ7 1066 aa18.8■□□□□ 0.6
GCOM1-212ENST00000496627 ZMYM3Q14202 1370 aa18.8■□□□□ 0.6
GCOM1-212ENST00000496627 TSPOAP1O95153 1857 aa18.8■□□□□ 0.6
GCOM1-212ENST00000496627 USP19O94966 1318 aa18.79■□□□□ 0.6
GCOM1-212ENST00000496627 IL16Q14005 1332 aa18.79■□□□□ 0.6
GCOM1-212ENST00000496627 CABP1Q9NZU7 370 aa18.79■□□□□ 0.6
GCOM1-212ENST00000496627 RIPK4P57078 832 aa18.78■□□□□ 0.6
GCOM1-212ENST00000496627 SEC24BO95487 1268 aa18.77■□□□□ 0.6
GCOM1-212ENST00000496627 DLC1Q96QB1 1528 aa18.77■□□□□ 0.6
GCOM1-212ENST00000496627 PNPLA6Q8IY17 1366 aa18.77■□□□□ 0.59
GCOM1-212ENST00000496627 CYB5RLQ6IPT4 315 aa18.76■□□□□ 0.59
GCOM1-212ENST00000496627 SSH1Q8WYL5 1049 aa18.76■□□□□ 0.59
GCOM1-212ENST00000496627 REREQ9P2R6 1566 aa18.76■□□□□ 0.59
GCOM1-212ENST00000496627 CDC42BPGQ6DT37 1551 aa18.76■□□□□ 0.59
GCOM1-212ENST00000496627 FAM69CQ0P6D2 419 aa18.75■□□□□ 0.59
GCOM1-212ENST00000496627 UPF2Q9HAU5 1272 aaKnown RBP18.75■□□□□ 0.59
GCOM1-212ENST00000496627 DIP2BQ9P265 1576 aa18.75■□□□□ 0.59
GCOM1-212ENST00000496627 TRIM27P14373 513 aa18.75■□□□□ 0.59
GCOM1-212ENST00000496627 LRRC7Q96NW7 1537 aa18.75■□□□□ 0.59
GCOM1-212ENST00000496627 SETD1AO15047 1707 aaKnown RBP18.75■□□□□ 0.59
GCOM1-212ENST00000496627 ATP7BP35670 1465 aa18.75■□□□□ 0.59
GCOM1-212ENST00000496627 AGLP35573 1532 aa18.74■□□□□ 0.59
GCOM1-212ENST00000496627 BECN1Q14457 450 aa18.74■□□□□ 0.59
GCOM1-212ENST00000496627 ITPRIPQ8IWB1 547 aa18.74■□□□□ 0.59
GCOM1-212ENST00000496627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.74■□□□□ 0.59
GCOM1-212ENST00000496627 MAP2P11137 1827 aaKnown RBP18.74■□□□□ 0.59
GCOM1-212ENST00000496627 A2ML1A8K2U0 1454 aa18.74■□□□□ 0.59
GCOM1-212ENST00000496627 RIMS2Q9UQ26 1411 aa18.74■□□□□ 0.59
GCOM1-212ENST00000496627 DDX19BQ9UMR2 479 aa18.74■□□□□ 0.59
GCOM1-212ENST00000496627 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
GCOM1-212ENST00000496627 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
GCOM1-212ENST00000496627 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
GCOM1-212ENST00000496627 ATF7IPQ6VMQ6 1270 aa18.73■□□□□ 0.59
GCOM1-212ENST00000496627 PPP6R1Q9UPN7 881 aa18.73■□□□□ 0.59
GCOM1-212ENST00000496627 SPATA31D1Q6ZQQ2 1576 aa18.73■□□□□ 0.59
GCOM1-212ENST00000496627 WAPLQ7Z5K2 1190 aa18.72■□□□□ 0.59
GCOM1-212ENST00000496627 FCHSD2O94868 740 aa18.72■□□□□ 0.59
GCOM1-212ENST00000496627 NOB1Q9ULX3 412 aaKnown RBP18.72■□□□□ 0.59
GCOM1-212ENST00000496627 KIF16BQ96L93 1317 aa18.72■□□□□ 0.59
GCOM1-212ENST00000496627 FAM135BQ49AJ0 1406 aa18.7■□□□□ 0.58
GCOM1-212ENST00000496627 PRKAR2BP31323 418 aa18.7■□□□□ 0.58
GCOM1-212ENST00000496627 GSE1Q14687 1217 aa18.7■□□□□ 0.58
GCOM1-212ENST00000496627 IPO8O15397 1037 aaKnown RBP18.69■□□□□ 0.58
GCOM1-212ENST00000496627 HDAC1Q13547 482 aaPredicted RBP18.69■□□□□ 0.58
GCOM1-212ENST00000496627 RSPH6AQ9H0K4 717 aa18.69■□□□□ 0.58
GCOM1-212ENST00000496627 POLKQ9UBT6 870 aa18.69■□□□□ 0.58
GCOM1-212ENST00000496627 TMEM57Q8N5G2 664 aa18.68■□□□□ 0.58
GCOM1-212ENST00000496627 TBC1D32Q96NH3 1257 aa18.68■□□□□ 0.58
GCOM1-212ENST00000496627 FRAT2O75474 233 aaPredicted RBP18.67■□□□□ 0.58
GCOM1-212ENST00000496627 ALDH1L2Q3SY69 923 aa18.67■□□□□ 0.58
GCOM1-212ENST00000496627 FBLN1P23142 703 aa18.67■□□□□ 0.58
GCOM1-212ENST00000496627 MLECQ14165 292 aa18.67■□□□□ 0.58
GCOM1-212ENST00000496627 EDC4Q6P2E9 1401 aaKnown RBP18.66■□□□□ 0.58
GCOM1-212ENST00000496627 PPIP5K1Q6PFW1 1433 aa18.66■□□□□ 0.58
GCOM1-212ENST00000496627 NRXN3Q9Y4C0 1643 aa18.66■□□□□ 0.58
GCOM1-212ENST00000496627 HMOX1P09601 288 aa18.64■□□□□ 0.57
GCOM1-212ENST00000496627 NFE2L2Q16236 605 aa18.64■□□□□ 0.57
GCOM1-212ENST00000496627 WASLO00401 505 aaPredicted RBP18.64■□□□□ 0.57
GCOM1-212ENST00000496627 CALD1Q05682 793 aaKnown RBP18.63■□□□□ 0.57
GCOM1-212ENST00000496627 ZBTB40Q9NUA8 1239 aa18.63■□□□□ 0.57
GCOM1-212ENST00000496627 CPSF1Q10570 1443 aaKnown RBP18.63■□□□□ 0.57
GCOM1-212ENST00000496627 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.63■□□□□ 0.57
GCOM1-212ENST00000496627 ZNF428Q96B54 188 aa18.63■□□□□ 0.57
GCOM1-212ENST00000496627 EMILIN1Q9Y6C2 1016 aa18.63■□□□□ 0.57
GCOM1-212ENST00000496627 CDK12Q9NYV4 1490 aaPredicted RBP18.62■□□□□ 0.57
GCOM1-212ENST00000496627 SMC5Q8IY18 1101 aa18.62■□□□□ 0.57
GCOM1-212ENST00000496627 KNDC1Q76NI1 1749 aa18.62■□□□□ 0.57
GCOM1-212ENST00000496627 MON2Q7Z3U7 1717 aa18.62■□□□□ 0.57
GCOM1-212ENST00000496627 SLKQ9H2G2 1235 aaPredicted RBP18.62■□□□□ 0.57
GCOM1-212ENST00000496627 ITSN1Q15811 1721 aa18.61■□□□□ 0.57
GCOM1-212ENST00000496627 NME9Q86XW9 330 aa18.61■□□□□ 0.57
GCOM1-212ENST00000496627 PHACTR3Q96KR7 559 aa18.61■□□□□ 0.57
GCOM1-212ENST00000496627 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
GCOM1-212ENST00000496627 METP08581 1390 aa18.6■□□□□ 0.57
GCOM1-212ENST00000496627 IL13P35225 146 aa18.59■□□□□ 0.57
GCOM1-212ENST00000496627 ESF1Q9H501 851 aaKnown RBP18.59■□□□□ 0.57
GCOM1-212ENST00000496627 AKAP12Q02952 1782 aa18.59■□□□□ 0.57
GCOM1-212ENST00000496627 BRPF1P55201 1214 aaPredicted RBP18.59■□□□□ 0.57
GCOM1-212ENST00000496627 GNAI1P63096 354 aa18.59■□□□□ 0.57
GCOM1-212ENST00000496627 TXNDC2Q86VQ3 553 aa18.59■□□□□ 0.57
GCOM1-212ENST00000496627 COG3Q96JB2 828 aa18.59■□□□□ 0.57
GCOM1-212ENST00000496627 THUMPD2Q9BTF0 503 aaKnown RBP18.59■□□□□ 0.57
GCOM1-212ENST00000496627 AATKQ6ZMQ8 1374 aa18.58■□□□□ 0.57
GCOM1-212ENST00000496627 MFAP1P55081 439 aaKnown RBP18.58■□□□□ 0.57
GCOM1-212ENST00000496627 NUDT16Q96DE0 195 aaKnown RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms