RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 ST20-MTHFSA0A0A6YYL1 179 aa11.38□□□□□ -0.59
SMARCD3-215ENST00000496530 ZNF692Q9BU19 519 aaPredicted RBP11.38□□□□□ -0.59
SMARCD3-215ENST00000496530 USP47Q96K76 1375 aa11.38□□□□□ -0.59
SMARCD3-215ENST00000496530 TRPM3Q9HCF6 1732 aaPredicted RBP11.38□□□□□ -0.59
SMARCD3-215ENST00000496530 ZNF316A6NFI3 1004 aaPredicted RBP11.37□□□□□ -0.59
SMARCD3-215ENST00000496530 TMF1P82094 1093 aa11.37□□□□□ -0.59
SMARCD3-215ENST00000496530 CDCA8Q53HL2 280 aa11.37□□□□□ -0.59
SMARCD3-215ENST00000496530 CABP1Q9NZU7 370 aa11.37□□□□□ -0.59
SMARCD3-215ENST00000496530 AFF2P51816 1311 aa11.36□□□□□ -0.59
SMARCD3-215ENST00000496530 PLEKHG5O94827 1062 aa11.36□□□□□ -0.59
SMARCD3-215ENST00000496530 HDGFL2Q7Z4V5 671 aaPredicted RBP11.36□□□□□ -0.59
SMARCD3-215ENST00000496530 TMC1Q8TDI8 760 aa11.36□□□□□ -0.59
SMARCD3-215ENST00000496530 PUS7Q96PZ0 661 aaKnown RBP11.36□□□□□ -0.59
SMARCD3-215ENST00000496530 ALS2Q96Q42 1657 aa11.36□□□□□ -0.59
SMARCD3-215ENST00000496530 ABTB2Q8N961 1025 aa11.35□□□□□ -0.59
SMARCD3-215ENST00000496530 USP21Q9UK80 565 aa11.35□□□□□ -0.59
SMARCD3-215ENST00000496530 NINLQ9Y2I6 1382 aa11.34□□□□□ -0.59
SMARCD3-215ENST00000496530 NLRP13Q86W25 1043 aa11.34□□□□□ -0.59
SMARCD3-215ENST00000496530 ABCA3Q99758 1704 aa11.33□□□□□ -0.6
SMARCD3-215ENST00000496530 RXRBP28702 533 aa11.33□□□□□ -0.6
SMARCD3-215ENST00000496530 ILDR2Q71H61 639 aa11.33□□□□□ -0.6
SMARCD3-215ENST00000496530 TERF2IPQ9NYB0 399 aa11.33□□□□□ -0.6
SMARCD3-215ENST00000496530 RGS17Q9UGC6 210 aaPredicted RBP11.33□□□□□ -0.6
SMARCD3-215ENST00000496530 TRPC5Q9UL62 973 aaPredicted RBP11.33□□□□□ -0.6
SMARCD3-215ENST00000496530 AKAP12Q02952 1782 aa11.33□□□□□ -0.6
SMARCD3-215ENST00000496530 USP6P35125 1406 aa11.33□□□□□ -0.6
SMARCD3-215ENST00000496530 KTN1Q86UP2 1357 aaKnown RBP11.32□□□□□ -0.6
SMARCD3-215ENST00000496530 POTEAQ6S8J7 498 aa11.32□□□□□ -0.6
SMARCD3-215ENST00000496530 CABLES1Q8TDN4 633 aa11.32□□□□□ -0.6
SMARCD3-215ENST00000496530 QTRT2Q9H974 415 aaKnown RBP11.32□□□□□ -0.6
SMARCD3-215ENST00000496530 TTC21AQ8NDW8 1320 aa11.32□□□□□ -0.6
SMARCD3-215ENST00000496530 RBM6P78332 1123 aaKnown RBP11.31□□□□□ -0.6
SMARCD3-215ENST00000496530 FNBP4Q8N3X1 1017 aaPredicted RBP11.31□□□□□ -0.6
SMARCD3-215ENST00000496530 SOCS7O14512 581 aa11.3□□□□□ -0.6
SMARCD3-215ENST00000496530 NLRP6P59044 892 aa11.3□□□□□ -0.6
SMARCD3-215ENST00000496530 NUTM2GQ5VZR2 741 aa11.3□□□□□ -0.6
SMARCD3-215ENST00000496530 TESK2Q96S53 571 aa11.3□□□□□ -0.6
SMARCD3-215ENST00000496530 COL14A1Q05707 1796 aaKnown RBP11.3□□□□□ -0.6
SMARCD3-215ENST00000496530 PHRF1Q9P1Y6 1649 aaKnown RBP11.3□□□□□ -0.6
SMARCD3-215ENST00000496530 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.29□□□□□ -0.6
SMARCD3-215ENST00000496530 NWD2Q9ULI1 1742 aa11.29□□□□□ -0.6
SMARCD3-215ENST00000496530 UNC5CLQ8IV45 518 aa11.29□□□□□ -0.6
SMARCD3-215ENST00000496530 PRDM11Q9NQV5 511 aa11.29□□□□□ -0.6
SMARCD3-215ENST00000496530 PLCH1Q4KWH8 1693 aa11.29□□□□□ -0.6
SMARCD3-215ENST00000496530 TTC21BQ7Z4L5 1316 aa11.29□□□□□ -0.6
SMARCD3-215ENST00000496530 MON2Q7Z3U7 1717 aa11.29□□□□□ -0.6
SMARCD3-215ENST00000496530 CPSF1Q10570 1443 aaKnown RBP11.28□□□□□ -0.6
SMARCD3-215ENST00000496530 CDK12Q9NYV4 1490 aaPredicted RBP11.28□□□□□ -0.6
SMARCD3-215ENST00000496530 KCNH5Q8NCM2 988 aa11.28□□□□□ -0.6
SMARCD3-215ENST00000496530 CCDC9Q9Y3X0 531 aaKnown RBP11.28□□□□□ -0.6
SMARCD3-215ENST00000496530 CRYBG1Q9Y4K1 1723 aa11.28□□□□□ -0.6
SMARCD3-215ENST00000496530 SLIT2O94813 1529 aa11.28□□□□□ -0.6
SMARCD3-215ENST00000496530 DDX10Q13206 875 aaKnown RBP11.27□□□□□ -0.61
SMARCD3-215ENST00000496530 SLC12A5Q9H2X9 1139 aa11.27□□□□□ -0.61
SMARCD3-215ENST00000496530 ATRNO75882 1429 aa11.26□□□□□ -0.61
SMARCD3-215ENST00000496530 EDC4Q6P2E9 1401 aaKnown RBP11.26□□□□□ -0.61
SMARCD3-215ENST00000496530 NRKQ7Z2Y5 1582 aa11.26□□□□□ -0.61
SMARCD3-215ENST00000496530 C11orf95C9JLR9 678 aaPredicted RBP11.26□□□□□ -0.61
SMARCD3-215ENST00000496530 GCP02774 474 aa11.26□□□□□ -0.61
SMARCD3-215ENST00000496530 ZC3H6P61129 1189 aaKnown RBP11.26□□□□□ -0.61
SMARCD3-215ENST00000496530 CNGB1Q14028 1251 aaPredicted RBP11.26□□□□□ -0.61
SMARCD3-215ENST00000496530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.26□□□□□ -0.61
SMARCD3-215ENST00000496530 BTG4Q9NY30 223 aa11.26□□□□□ -0.61
SMARCD3-215ENST00000496530 USP19O94966 1318 aa11.26□□□□□ -0.61
SMARCD3-215ENST00000496530 ANKRD36BQ8N2N9 1353 aa11.26□□□□□ -0.61
SMARCD3-215ENST00000496530 BCL9LQ86UU0 1499 aa11.25□□□□□ -0.61
SMARCD3-215ENST00000496530 PIK3C2AO00443 1686 aa11.25□□□□□ -0.61
SMARCD3-215ENST00000496530 ZBTB7CA1YPR0 619 aa11.25□□□□□ -0.61
SMARCD3-215ENST00000496530 FAM83GA6ND36 823 aa11.25□□□□□ -0.61
SMARCD3-215ENST00000496530 EVA1CP58658 441 aa11.25□□□□□ -0.61
SMARCD3-215ENST00000496530 GJD4Q96KN9 370 aaPredicted RBP11.25□□□□□ -0.61
SMARCD3-215ENST00000496530 A0A1W2PP64 1363 aa11.25□□□□□ -0.61
SMARCD3-215ENST00000496530 KIAA0232Q92628 1395 aa11.25□□□□□ -0.61
SMARCD3-215ENST00000496530 SSH2Q76I76 1423 aa11.25□□□□□ -0.61
SMARCD3-215ENST00000496530 VPS72Q15906 364 aa11.24□□□□□ -0.61
SMARCD3-215ENST00000496530 SLIT3O75094 1523 aa11.24□□□□□ -0.61
SMARCD3-215ENST00000496530 CPDO75976 1380 aa11.23□□□□□ -0.61
SMARCD3-215ENST00000496530 CD163L1Q9NR16 1453 aa11.23□□□□□ -0.61
SMARCD3-215ENST00000496530 A0A0G2JS52 829 aa11.22□□□□□ -0.61
SMARCD3-215ENST00000496530 MYT1Q01538 1121 aa11.22□□□□□ -0.61
SMARCD3-215ENST00000496530 CHRNA2Q15822 529 aa11.22□□□□□ -0.61
SMARCD3-215ENST00000496530 NRAPQ86VF7 1730 aa11.22□□□□□ -0.61
SMARCD3-215ENST00000496530 COG3Q96JB2 828 aa11.22□□□□□ -0.61
SMARCD3-215ENST00000496530 RGS12O14924 1447 aa11.21□□□□□ -0.61
SMARCD3-215ENST00000496530 USP31Q70CQ4 1352 aa11.21□□□□□ -0.61
SMARCD3-215ENST00000496530 SOX12O15370 315 aa11.21□□□□□ -0.61
SMARCD3-215ENST00000496530 STRN4Q9NRL3 753 aa11.21□□□□□ -0.61
SMARCD3-215ENST00000496530 USP54Q70EL1 1684 aa11.2□□□□□ -0.62
SMARCD3-215ENST00000496530 NME9Q86XW9 330 aa11.2□□□□□ -0.62
SMARCD3-215ENST00000496530 MYOM1P52179 1685 aa11.19□□□□□ -0.62
SMARCD3-215ENST00000496530 AATKQ6ZMQ8 1374 aa11.18□□□□□ -0.62
SMARCD3-215ENST00000496530 KIF7Q2M1P5 1343 aa11.18□□□□□ -0.62
SMARCD3-215ENST00000496530 WASHC2AQ641Q2 1341 aa11.18□□□□□ -0.62
SMARCD3-215ENST00000496530 CSB-PGBD3P0DP91 1061 aa11.18□□□□□ -0.62
SMARCD3-215ENST00000496530 PANK3Q9H999 370 aa11.18□□□□□ -0.62
SMARCD3-215ENST00000496530 GLI3P10071 1580 aa11.18□□□□□ -0.62
SMARCD3-215ENST00000496530 ABCC6O95255 1503 aa11.18□□□□□ -0.62
SMARCD3-215ENST00000496530 KIF20BQ96Q89 1820 aa11.18□□□□□ -0.62
SMARCD3-215ENST00000496530 LMO7Q8WWI1 1683 aa11.17□□□□□ -0.62
SMARCD3-215ENST00000496530 CGNL1Q0VF96 1302 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms