RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 CLTCQ00610 1675 aaKnown RBP6.95□□□□□ -1.3
VPS52-222ENST00000495981 CEP170BQ9Y4F5 1589 aaPredicted RBP6.95□□□□□ -1.3
VPS52-222ENST00000495981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.95□□□□□ -1.3
VPS52-222ENST00000495981 SLC34A2O95436 690 aa6.94□□□□□ -1.3
VPS52-222ENST00000495981 POTEJP0CG39 1038 aa6.94□□□□□ -1.3
VPS52-222ENST00000495981 MYSM1Q5VVJ2 828 aa6.94□□□□□ -1.3
VPS52-222ENST00000495981 FAM9AQ8IZU1 332 aaPredicted RBP6.94□□□□□ -1.3
VPS52-222ENST00000495981 L3MBTL3Q96JM7 780 aaPredicted RBP6.94□□□□□ -1.3
VPS52-222ENST00000495981 PCDHGA10Q9Y5H3 936 aa6.94□□□□□ -1.3
VPS52-222ENST00000495981 EHBP1L1Q8N3D4 1523 aa6.94□□□□□ -1.3
VPS52-222ENST00000495981 SUPT6HQ7KZ85 1726 aaKnown RBP6.93□□□□□ -1.3
VPS52-222ENST00000495981 GPATCH8Q9UKJ3 1502 aaKnown RBP6.93□□□□□ -1.3
VPS52-222ENST00000495981 G3V3G9 751 aa6.93□□□□□ -1.3
VPS52-222ENST00000495981 METTL3Q86U44 580 aaKnown RBP6.93□□□□□ -1.3
VPS52-222ENST00000495981 EPAS1Q99814 870 aa6.93□□□□□ -1.3
VPS52-222ENST00000495981 POLR3EQ9NVU0 708 aa6.93□□□□□ -1.3
VPS52-222ENST00000495981 COG6Q9Y2V7 657 aa6.93□□□□□ -1.3
VPS52-222ENST00000495981 A2ML1A8K2U0 1454 aa6.92□□□□□ -1.3
VPS52-222ENST00000495981 MAP3K7O43318 606 aa6.92□□□□□ -1.3
VPS52-222ENST00000495981 GGT6Q6P531 493 aa6.92□□□□□ -1.3
VPS52-222ENST00000495981 MAMSTRQ6ZN01 415 aa6.92□□□□□ -1.3
VPS52-222ENST00000495981 ANKLE2Q86XL3 938 aa6.92□□□□□ -1.3
VPS52-222ENST00000495981 RBM33Q96EV2 1170 aaKnown RBP6.92□□□□□ -1.3
VPS52-222ENST00000495981 POLR1AO95602 1720 aaPredicted RBP6.91□□□□□ -1.3
VPS52-222ENST00000495981 TTC13Q8NBP0 860 aa6.91□□□□□ -1.3
VPS52-222ENST00000495981 TRAIPQ9BWF2 469 aa6.91□□□□□ -1.3
VPS52-222ENST00000495981 SCUBE2Q9NQ36 999 aa6.91□□□□□ -1.3
VPS52-222ENST00000495981 SNRKQ9NRH2 765 aa6.91□□□□□ -1.3
VPS52-222ENST00000495981 PLSCR2Q9NRY7 297 aa6.91□□□□□ -1.3
VPS52-222ENST00000495981 ADGRG1Q9Y653 693 aa6.91□□□□□ -1.3
VPS52-222ENST00000495981 NPHP4O75161 1426 aaPredicted RBP6.91□□□□□ -1.3
VPS52-222ENST00000495981 FAM135BQ49AJ0 1406 aa6.91□□□□□ -1.3
VPS52-222ENST00000495981 DNMT1P26358 1616 aaKnown RBP6.9□□□□□ -1.3
VPS52-222ENST00000495981 ZBTB7CA1YPR0 619 aa6.9□□□□□ -1.3
VPS52-222ENST00000495981 SPDYE5A6NIY4 337 aa6.9□□□□□ -1.3
VPS52-222ENST00000495981 SLAIN1Q8ND83 568 aa6.9□□□□□ -1.3
VPS52-222ENST00000495981 PXYLP1Q8TE99 480 aa6.9□□□□□ -1.3
VPS52-222ENST00000495981 FAM135AQ9P2D6 1515 aa6.9□□□□□ -1.31
VPS52-222ENST00000495981 RFC5P40937 340 aa6.89□□□□□ -1.31
VPS52-222ENST00000495981 CLK2P49760 499 aaKnown RBP6.89□□□□□ -1.31
VPS52-222ENST00000495981 OTUD5Q96G74 571 aa6.89□□□□□ -1.31
VPS52-222ENST00000495981 SERPINA10Q9UK55 444 aa6.89□□□□□ -1.31
VPS52-222ENST00000495981 KIAA1107Q9UPP5 1409 aa6.89□□□□□ -1.31
VPS52-222ENST00000495981 PLEKHH2Q8IVE3 1493 aa6.89□□□□□ -1.31
VPS52-222ENST00000495981 RNF17Q9BXT8 1623 aaKnown RBP6.89□□□□□ -1.31
VPS52-222ENST00000495981 STRCP1A6NGW2 1772 aa6.89□□□□□ -1.31
VPS52-222ENST00000495981 LRP6O75581 1613 aa6.88□□□□□ -1.31
VPS52-222ENST00000495981 MROH1Q8NDA8 1641 aa6.88□□□□□ -1.31
VPS52-222ENST00000495981 MED14O60244 1454 aa6.88□□□□□ -1.31
VPS52-222ENST00000495981 A2MP01023 1474 aa6.88□□□□□ -1.31
VPS52-222ENST00000495981 MBD5Q9P267 1494 aa6.88□□□□□ -1.31
VPS52-222ENST00000495981 TNRQ92752 1358 aa6.88□□□□□ -1.31
VPS52-222ENST00000495981 HNRNPMP52272 730 aaKnown RBP eCLIP6.88□□□□□ -1.31
VPS52-222ENST00000495981 TYW1BQ6NUM6 668 aa6.88□□□□□ -1.31
VPS52-222ENST00000495981 PADI6Q6TGC4 694 aa6.88□□□□□ -1.31
VPS52-222ENST00000495981 BANK1Q8NDB2 785 aa6.88□□□□□ -1.31
VPS52-222ENST00000495981 TBC1D2Q9BYX2 928 aa6.88□□□□□ -1.31
VPS52-222ENST00000495981 SETBP1Q9Y6X0 1596 aa6.87□□□□□ -1.31
VPS52-222ENST00000495981 KDM5DQ9BY66 1539 aa6.87□□□□□ -1.31
VPS52-222ENST00000495981 OATP04181 439 aa6.87□□□□□ -1.31
VPS52-222ENST00000495981 C3orf67Q6ZVT6 689 aa6.87□□□□□ -1.31
VPS52-222ENST00000495981 MTMR14Q8NCE2 650 aa6.87□□□□□ -1.31
VPS52-222ENST00000495981 LIMD1Q9UGP4 676 aa6.87□□□□□ -1.31
VPS52-222ENST00000495981 ATP1B4Q9UN42 357 aaPredicted RBP6.87□□□□□ -1.31
VPS52-222ENST00000495981 ZC3H13Q5T200 1668 aaKnown RBP6.87□□□□□ -1.31
VPS52-222ENST00000495981 ARHGEF5Q12774 1597 aa6.86□□□□□ -1.31
VPS52-222ENST00000495981 CAMSAP2Q08AD1 1489 aa6.86□□□□□ -1.31
VPS52-222ENST00000495981 CEP162Q5TB80 1403 aa6.86□□□□□ -1.31
VPS52-222ENST00000495981 RAD21O60216 631 aa6.86□□□□□ -1.31
VPS52-222ENST00000495981 LTKP29376 864 aa6.86□□□□□ -1.31
VPS52-222ENST00000495981 PPP2R2DQ66LE6 453 aa6.86□□□□□ -1.31
VPS52-222ENST00000495981 THEMISQ8N1K5 641 aaPredicted RBP6.86□□□□□ -1.31
VPS52-222ENST00000495981 CCDC97Q96F63 343 aaPredicted RBP6.86□□□□□ -1.31
VPS52-222ENST00000495981 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.86□□□□□ -1.31
VPS52-222ENST00000495981 CDK11AQ9UQ88 783 aaPredicted RBP6.86□□□□□ -1.31
VPS52-222ENST00000495981 CCDC9Q9Y3X0 531 aaKnown RBP6.86□□□□□ -1.31
VPS52-222ENST00000495981 CROCC2H7BZ55 1655 aa6.86□□□□□ -1.31
VPS52-222ENST00000495981 MAST1Q9Y2H9 1570 aa6.86□□□□□ -1.31
VPS52-222ENST00000495981 SPAG9O60271 1321 aaKnown RBP6.85□□□□□ -1.31
VPS52-222ENST00000495981 RXRBP28702 533 aa6.85□□□□□ -1.31
VPS52-222ENST00000495981 FBXW7Q969H0 707 aa6.85□□□□□ -1.31
VPS52-222ENST00000495981 PCDHGA4Q9Y5G9 962 aa6.85□□□□□ -1.31
VPS52-222ENST00000495981 EIF2AK4Q9P2K8 1649 aaKnown RBP6.85□□□□□ -1.31
VPS52-222ENST00000495981 CCDC141Q6ZP82 1450 aa6.85□□□□□ -1.31
VPS52-222ENST00000495981 TMEM94Q12767 1356 aa6.84□□□□□ -1.31
VPS52-222ENST00000495981 FOSBP53539 338 aa6.84□□□□□ -1.31
VPS52-222ENST00000495981 C6orf132Q5T0Z8 1188 aa6.84□□□□□ -1.31
VPS52-222ENST00000495981 RETREG2Q8NC44 543 aa6.84□□□□□ -1.31
VPS52-222ENST00000495981 PZPP20742 1482 aa6.84□□□□□ -1.31
VPS52-222ENST00000495981 NCOA2Q15596 1464 aa6.84□□□□□ -1.31
VPS52-222ENST00000495981 MIA2Q96PC5 1412 aa6.84□□□□□ -1.32
VPS52-222ENST00000495981 DEPDC5O75140 1603 aa6.83□□□□□ -1.32
VPS52-222ENST00000495981 ZNF772Q68DY9 489 aaPredicted RBP6.83□□□□□ -1.32
VPS52-222ENST00000495981 SPIRE2Q8WWL2 714 aa6.83□□□□□ -1.32
VPS52-222ENST00000495981 RBM27Q9P2N5 1060 aaKnown RBP6.83□□□□□ -1.32
VPS52-222ENST00000495981 RTEL1-TNFRSF6BF6WH68 1400 aa6.83□□□□□ -1.32
VPS52-222ENST00000495981 RGS12O14924 1447 aa6.83□□□□□ -1.32
VPS52-222ENST00000495981 JCADQ9P266 1359 aa6.82□□□□□ -1.32
VPS52-222ENST00000495981 SYNMO15061 1565 aa6.82□□□□□ -1.32
VPS52-222ENST00000495981 EP400Q96L91 3159 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms