RNA–Protein interactions for RNA: ENST00000495888.1

SPOCK2-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

TSL 1 (best)

Gene SPOCK2, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-208ENST00000495888 ESCO1Q5FWF5 840 aa28.5■■■□□ 2.15
SPOCK2-208ENST00000495888 PPIP5K1Q6PFW1 1433 aa28.5■■■□□ 2.15
SPOCK2-208ENST00000495888 ANKRD36BQ8N2N9 1353 aa28.5■■■□□ 2.15
SPOCK2-208ENST00000495888 CABP1Q9NZU7 370 aa28.49■■■□□ 2.15
SPOCK2-208ENST00000495888 PLEKHG3A1L390 1219 aa28.48■■■□□ 2.15
SPOCK2-208ENST00000495888 ITSN1Q15811 1721 aa28.47■■■□□ 2.15
SPOCK2-208ENST00000495888 FNBP4Q8N3X1 1017 aaPredicted RBP28.47■■■□□ 2.15
SPOCK2-208ENST00000495888 CD163L1Q9NR16 1453 aa28.46■■■□□ 2.15
SPOCK2-208ENST00000495888 PER1O15534 1290 aaPredicted RBP28.46■■■□□ 2.15
SPOCK2-208ENST00000495888 TERF2IPQ9NYB0 399 aa28.46■■■□□ 2.15
SPOCK2-208ENST00000495888 MARF1Q9Y4F3 1742 aaKnown RBP28.45■■■□□ 2.14
SPOCK2-208ENST00000495888 FOXO3O43524 673 aa28.44■■■□□ 2.14
SPOCK2-208ENST00000495888 USP21Q9UK80 565 aa28.44■■■□□ 2.14
SPOCK2-208ENST00000495888 KIF1AQ12756 1690 aa28.44■■■□□ 2.14
SPOCK2-208ENST00000495888 ATRNO75882 1429 aa28.43■■■□□ 2.14
SPOCK2-208ENST00000495888 CPSF1Q10570 1443 aaKnown RBP28.43■■■□□ 2.14
SPOCK2-208ENST00000495888 NUTM2FA1L443 756 aa28.43■■■□□ 2.14
SPOCK2-208ENST00000495888 A0A1W2PP64 1363 aa28.42■■■□□ 2.14
SPOCK2-208ENST00000495888 HDGFL2Q7Z4V5 671 aaPredicted RBP28.41■■■□□ 2.14
SPOCK2-208ENST00000495888 CARD14Q9BXL6 1004 aa28.41■■■□□ 2.14
SPOCK2-208ENST00000495888 POLR3AO14802 1390 aaPredicted RBP28.4■■■□□ 2.14
SPOCK2-208ENST00000495888 XPCQ01831 940 aaPredicted RBP28.4■■■□□ 2.14
SPOCK2-208ENST00000495888 TRPC5Q9UL62 973 aaPredicted RBP28.4■■■□□ 2.14
SPOCK2-208ENST00000495888 RGPD8O14715 1765 aaPredicted RBP28.39■■■□□ 2.13
SPOCK2-208ENST00000495888 ZNF692Q9BU19 519 aaPredicted RBP28.38■■■□□ 2.13
SPOCK2-208ENST00000495888 BCL9LQ86UU0 1499 aa28.38■■■□□ 2.13
SPOCK2-208ENST00000495888 KNSTRNQ9Y448 316 aa28.37■■■□□ 2.13
SPOCK2-208ENST00000495888 NPC1L1Q9UHC9 1359 aa28.37■■■□□ 2.13
SPOCK2-208ENST00000495888 PHF8Q9UPP1 1060 aa28.36■■■□□ 2.13
SPOCK2-208ENST00000495888 ACEP12821 1306 aa28.36■■■□□ 2.13
SPOCK2-208ENST00000495888 NSD3Q9BZ95 1437 aa28.35■■■□□ 2.13
SPOCK2-208ENST00000495888 AKAP12Q02952 1782 aa28.35■■■□□ 2.13
SPOCK2-208ENST00000495888 SPATA31A3Q5VYP0 1347 aa28.34■■■□□ 2.13
SPOCK2-208ENST00000495888 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.34■■■□□ 2.13
SPOCK2-208ENST00000495888 KTN1Q86UP2 1357 aaKnown RBP28.34■■■□□ 2.13
SPOCK2-208ENST00000495888 MON2Q7Z3U7 1717 aa28.33■■■□□ 2.13
SPOCK2-208ENST00000495888 AMER1Q5JTC6 1135 aaPredicted RBP28.33■■■□□ 2.13
SPOCK2-208ENST00000495888 EDC4Q6P2E9 1401 aaKnown RBP28.33■■■□□ 2.13
SPOCK2-208ENST00000495888 PMFBP1Q8TBY8 1022 aa28.31■■■□□ 2.12
SPOCK2-208ENST00000495888 USP6P35125 1406 aa28.3■■■□□ 2.12
SPOCK2-208ENST00000495888 BRD4O60885 1362 aaPredicted RBP28.3■■■□□ 2.12
SPOCK2-208ENST00000495888 NGDNQ8NEJ9 315 aaKnown RBP28.3■■■□□ 2.12
SPOCK2-208ENST00000495888 SLIT2O94813 1529 aa28.29■■■□□ 2.12
SPOCK2-208ENST00000495888 SSH2Q76I76 1423 aa28.29■■■□□ 2.12
SPOCK2-208ENST00000495888 CGNL1Q0VF96 1302 aa28.29■■■□□ 2.12
SPOCK2-208ENST00000495888 EP400Q96L91 3159 aa28.28■■■□□ 2.12
SPOCK2-208ENST00000495888 ANP32CO43423 234 aa28.28■■■□□ 2.12
SPOCK2-208ENST00000495888 TNS3Q68CZ2 1445 aa28.27■■■□□ 2.12
SPOCK2-208ENST00000495888 NSD2O96028 1365 aa28.27■■■□□ 2.12
SPOCK2-208ENST00000495888 KRT28Q7Z3Y7 464 aa28.27■■■□□ 2.12
SPOCK2-208ENST00000495888 NRKQ7Z2Y5 1582 aa28.26■■■□□ 2.11
SPOCK2-208ENST00000495888 PRKRIP1Q9H875 184 aaPredicted RBP28.24■■■□□ 2.11
SPOCK2-208ENST00000495888 GLI3P10071 1580 aa28.24■■■□□ 2.11
SPOCK2-208ENST00000495888 ABCA3Q99758 1704 aa28.23■■■□□ 2.11
SPOCK2-208ENST00000495888 GJD4Q96KN9 370 aaPredicted RBP28.23■■■□□ 2.11
SPOCK2-208ENST00000495888 TTC21BQ7Z4L5 1316 aa28.22■■■□□ 2.11
SPOCK2-208ENST00000495888 SBNO1A3KN83 1393 aa28.22■■■□□ 2.11
SPOCK2-208ENST00000495888 PARD3Q8TEW0 1356 aa28.22■■■□□ 2.11
SPOCK2-208ENST00000495888 TTC21AQ8NDW8 1320 aa28.21■■■□□ 2.11
SPOCK2-208ENST00000495888 RALBP1Q15311 655 aa28.21■■■□□ 2.11
SPOCK2-208ENST00000495888 UNC5CLQ8IV45 518 aa28.2■■■□□ 2.1
SPOCK2-208ENST00000495888 FYB1O15117 783 aa28.19■■■□□ 2.1
SPOCK2-208ENST00000495888 CC2D1BQ5T0F9 858 aaKnown RBP28.19■■■□□ 2.1
SPOCK2-208ENST00000495888 PSME1Q06323 249 aa28.18■■■□□ 2.1
SPOCK2-208ENST00000495888 MIER1Q8N108 512 aa28.18■■■□□ 2.1
SPOCK2-208ENST00000495888 PLCH1Q4KWH8 1693 aa28.17■■■□□ 2.1
SPOCK2-208ENST00000495888 TRPM3Q9HCF6 1732 aaPredicted RBP28.16■■■□□ 2.1
SPOCK2-208ENST00000495888 NWD2Q9ULI1 1742 aa28.16■■■□□ 2.1
SPOCK2-208ENST00000495888 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.16■■■□□ 2.1
SPOCK2-208ENST00000495888 ARHGEF10O15013 1369 aa28.15■■■□□ 2.1
SPOCK2-208ENST00000495888 KIF20BQ96Q89 1820 aa28.15■■■□□ 2.1
SPOCK2-208ENST00000495888 CABLES1Q8TDN4 633 aa28.13■■■□□ 2.09
SPOCK2-208ENST00000495888 USP31Q70CQ4 1352 aa28.12■■■□□ 2.09
SPOCK2-208ENST00000495888 ANKRD26Q9UPS8 1709 aa28.12■■■□□ 2.09
SPOCK2-208ENST00000495888 NME9Q86XW9 330 aa28.12■■■□□ 2.09
SPOCK2-208ENST00000495888 ALS2Q96Q42 1657 aa28.11■■■□□ 2.09
SPOCK2-208ENST00000495888 GGNBP2Q9H3C7 697 aa28.11■■■□□ 2.09
SPOCK2-208ENST00000495888 SRCAPQ6ZRS2 3230 aa28.11■■■□□ 2.09
SPOCK2-208ENST00000495888 MORC1Q86VD1 984 aa28.1■■■□□ 2.09
SPOCK2-208ENST00000495888 OVOS2A0A0J9YW53 1432 aa28.09■■■□□ 2.09
SPOCK2-208ENST00000495888 OVOS2Q6IE36 1432 aa28.09■■■□□ 2.09
SPOCK2-208ENST00000495888 CCDC125Q86Z20 511 aa28.09■■■□□ 2.09
SPOCK2-208ENST00000495888 PIK3C2AO00443 1686 aa28.08■■■□□ 2.09
SPOCK2-208ENST00000495888 USP54Q70EL1 1684 aa28.08■■■□□ 2.09
SPOCK2-208ENST00000495888 HAP1P54257 671 aaPredicted RBP28.08■■■□□ 2.09
SPOCK2-208ENST00000495888 CNGB1Q14028 1251 aaPredicted RBP28.08■■■□□ 2.09
SPOCK2-208ENST00000495888 VPS72Q15906 364 aa28.08■■■□□ 2.09
SPOCK2-208ENST00000495888 MYBBP1AQ9BQG0 1328 aaKnown RBP28.08■■■□□ 2.09
SPOCK2-208ENST00000495888 BRWD3Q6RI45 1802 aa28.08■■■□□ 2.09
SPOCK2-208ENST00000495888 CCER2I3L3R5 266 aa28.07■■■□□ 2.08
SPOCK2-208ENST00000495888 NRAPQ86VF7 1730 aa28.06■■■□□ 2.08
SPOCK2-208ENST00000495888 COG3Q96JB2 828 aa28.06■■■□□ 2.08
SPOCK2-208ENST00000495888 PAK3O75914 559 aaPredicted RBP28.05■■■□□ 2.08
SPOCK2-208ENST00000495888 LMOD2Q6P5Q4 547 aa28.05■■■□□ 2.08
SPOCK2-208ENST00000495888 CRYBG1Q9Y4K1 1723 aa28.05■■■□□ 2.08
SPOCK2-208ENST00000495888 ZRANB1Q9UGI0 708 aa28.04■■■□□ 2.08
SPOCK2-208ENST00000495888 ABTB2Q8N961 1025 aa28.03■■■□□ 2.08
SPOCK2-208ENST00000495888 BLMP54132 1417 aaPredicted RBP28.02■■■□□ 2.08
SPOCK2-208ENST00000495888 ONECUT3O60422 494 aaPredicted RBP28.02■■■□□ 2.08
SPOCK2-208ENST00000495888 PPP2R1AP30153 589 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms