RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 RTEL1-TNFRSF6BF6WH68 1400 aa16.86■□□□□ 0.29
BRD9-213ENST00000495794 CAMSAP2Q08AD1 1489 aa16.86■□□□□ 0.29
BRD9-213ENST00000495794 THEMISQ8N1K5 641 aaPredicted RBP16.85■□□□□ 0.29
BRD9-213ENST00000495794 FCHSD2O94868 740 aa16.85■□□□□ 0.29
BRD9-213ENST00000495794 RABEP1Q15276 862 aa16.85■□□□□ 0.29
BRD9-213ENST00000495794 TRAK2O60296 914 aa16.84■□□□□ 0.29
BRD9-213ENST00000495794 AMER1Q5JTC6 1135 aaPredicted RBP16.84■□□□□ 0.29
BRD9-213ENST00000495794 NCOA1Q15788 1441 aa16.84■□□□□ 0.29
BRD9-213ENST00000495794 VPS37DQ86XT2 251 aa16.84■□□□□ 0.29
BRD9-213ENST00000495794 FSD1Q9BTV5 496 aa16.84■□□□□ 0.29
BRD9-213ENST00000495794 SLC26A8Q96RN1 970 aa16.84■□□□□ 0.29
BRD9-213ENST00000495794 MRE11P49959 708 aa16.84■□□□□ 0.29
BRD9-213ENST00000495794 RALYLQ86SE5 291 aaKnown RBP16.84■□□□□ 0.29
BRD9-213ENST00000495794 ZNF428Q96B54 188 aa16.84■□□□□ 0.29
BRD9-213ENST00000495794 NSD3Q9BZ95 1437 aa16.83■□□□□ 0.29
BRD9-213ENST00000495794 TMPOP42166 694 aaKnown RBP16.83■□□□□ 0.28
BRD9-213ENST00000495794 WASHC4Q2M389 1173 aa16.83■□□□□ 0.28
BRD9-213ENST00000495794 MCM2P49736 904 aa16.82■□□□□ 0.28
BRD9-213ENST00000495794 CCT4P50991 539 aaKnown RBP16.82■□□□□ 0.28
BRD9-213ENST00000495794 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.82■□□□□ 0.28
BRD9-213ENST00000495794 CCDC61Q9Y6R9 512 aa16.82■□□□□ 0.28
BRD9-213ENST00000495794 NOC3LQ8WTT2 800 aaKnown RBP16.82■□□□□ 0.28
BRD9-213ENST00000495794 TSR1Q2NL82 804 aaKnown RBP16.82■□□□□ 0.28
BRD9-213ENST00000495794 NFXL1Q6ZNB6 911 aa16.82■□□□□ 0.28
BRD9-213ENST00000495794 NOL10Q9BSC4 688 aaKnown RBP16.82■□□□□ 0.28
BRD9-213ENST00000495794 PSMA5P28066 241 aa16.81■□□□□ 0.28
BRD9-213ENST00000495794 CCDC73Q6ZRK6 1079 aa16.81■□□□□ 0.28
BRD9-213ENST00000495794 PROSER2Q86WR7 435 aaPredicted RBP16.81■□□□□ 0.28
BRD9-213ENST00000495794 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
BRD9-213ENST00000495794 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
BRD9-213ENST00000495794 VPS53Q5VIR6 699 aa16.81■□□□□ 0.28
BRD9-213ENST00000495794 AMOTL1Q8IY63 956 aa16.81■□□□□ 0.28
BRD9-213ENST00000495794 SASS6Q6UVJ0 657 aa16.81■□□□□ 0.28
BRD9-213ENST00000495794 TPM1P09493 284 aa16.8■□□□□ 0.28
BRD9-213ENST00000495794 CHD1LQ86WJ1 897 aa16.79■□□□□ 0.28
BRD9-213ENST00000495794 SRCIN1Q9C0H9 1055 aa16.79■□□□□ 0.28
BRD9-213ENST00000495794 ERICH2A1L162 156 aa16.79■□□□□ 0.28
BRD9-213ENST00000495794 NFE2L2Q16236 605 aa16.79■□□□□ 0.28
BRD9-213ENST00000495794 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.79■□□□□ 0.28
BRD9-213ENST00000495794 ZNF530Q6P9A1 599 aaPredicted RBP16.79■□□□□ 0.28
BRD9-213ENST00000495794 FAM43AQ8N2R8 423 aa16.79■□□□□ 0.28
BRD9-213ENST00000495794 NASPP49321 788 aaPredicted RBP16.78■□□□□ 0.28
BRD9-213ENST00000495794 FOSBP53539 338 aa16.78■□□□□ 0.28
BRD9-213ENST00000495794 MBD3O95983 291 aa16.78■□□□□ 0.28
BRD9-213ENST00000495794 MAPKBP1O60336 1514 aa16.78■□□□□ 0.28
BRD9-213ENST00000495794 RPRD2Q5VT52 1461 aaKnown RBP16.78■□□□□ 0.28
BRD9-213ENST00000495794 SAFBQ15424 915 aaKnown RBP eCLIP16.78■□□□□ 0.28
BRD9-213ENST00000495794 ERC1Q8IUD2 1116 aa16.78■□□□□ 0.28
BRD9-213ENST00000495794 GOLGA6L1Q8N7Z2 621 aa16.78■□□□□ 0.28
BRD9-213ENST00000495794 LRRCC1Q9C099 1032 aa16.78■□□□□ 0.28
BRD9-213ENST00000495794 RNF214Q8ND24 703 aa16.77■□□□□ 0.28
BRD9-213ENST00000495794 CAVIN1Q6NZI2 390 aaKnown RBP16.77■□□□□ 0.28
BRD9-213ENST00000495794 ZNF592Q92610 1267 aa16.77■□□□□ 0.28
BRD9-213ENST00000495794 NUDT16Q96DE0 195 aaKnown RBP16.77■□□□□ 0.28
BRD9-213ENST00000495794 HOOK1Q9UJC3 728 aaKnown RBP16.77■□□□□ 0.27
BRD9-213ENST00000495794 THOC2Q8NI27 1593 aaKnown RBP16.76■□□□□ 0.27
BRD9-213ENST00000495794 HIP1O00291 1037 aa16.76■□□□□ 0.27
BRD9-213ENST00000495794 CCAR2Q8N163 923 aaKnown RBP16.76■□□□□ 0.27
BRD9-213ENST00000495794 TATP17735 454 aaPredicted RBP16.76■□□□□ 0.27
BRD9-213ENST00000495794 PDCP20941 246 aa16.76■□□□□ 0.27
BRD9-213ENST00000495794 KIF14Q15058 1648 aa16.76■□□□□ 0.27
BRD9-213ENST00000495794 TMEM57Q8N5G2 664 aa16.76■□□□□ 0.27
BRD9-213ENST00000495794 MSH5O43196 834 aa16.75■□□□□ 0.27
BRD9-213ENST00000495794 PRPF40AO75400 957 aaKnown RBP16.75■□□□□ 0.27
BRD9-213ENST00000495794 PTPRKQ15262 1439 aa16.75■□□□□ 0.27
BRD9-213ENST00000495794 C20orf194Q5TEA3 1177 aa16.75■□□□□ 0.27
BRD9-213ENST00000495794 RPAP2Q8IXW5 612 aaPredicted RBP16.75■□□□□ 0.27
BRD9-213ENST00000495794 DNAJC2Q99543 621 aaKnown RBP16.75■□□□□ 0.27
BRD9-213ENST00000495794 SDF4Q9BRK5 362 aa16.74■□□□□ 0.27
BRD9-213ENST00000495794 THUMPD2Q9BTF0 503 aaKnown RBP16.74■□□□□ 0.27
BRD9-213ENST00000495794 ADGRF5Q8IZF2 1346 aa16.74■□□□□ 0.27
BRD9-213ENST00000495794 RARSP54136 660 aaKnown RBP16.74■□□□□ 0.27
BRD9-213ENST00000495794 ANKRD20A12PQ8NF67 263 aa16.74■□□□□ 0.27
BRD9-213ENST00000495794 DHX16O60231 1041 aaKnown RBP16.74■□□□□ 0.27
BRD9-213ENST00000495794 CCDC27Q2M243 656 aa16.74■□□□□ 0.27
BRD9-213ENST00000495794 TPM2P07951 284 aa16.73■□□□□ 0.27
BRD9-213ENST00000495794 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.73■□□□□ 0.27
BRD9-213ENST00000495794 WAPLQ7Z5K2 1190 aa16.73■□□□□ 0.27
BRD9-213ENST00000495794 CTTNBP2Q8WZ74 1663 aa16.73■□□□□ 0.27
BRD9-213ENST00000495794 SSH1Q8WYL5 1049 aa16.73■□□□□ 0.27
BRD9-213ENST00000495794 CCDC47Q96A33 483 aaKnown RBP16.73■□□□□ 0.27
BRD9-213ENST00000495794 K7ELQ4 463 aaPredicted RBP16.73■□□□□ 0.27
BRD9-213ENST00000495794 FBXW7Q969H0 707 aa16.73■□□□□ 0.27
BRD9-213ENST00000495794 RAD21O60216 631 aa16.72■□□□□ 0.27
BRD9-213ENST00000495794 IPO7O95373 1038 aaKnown RBP16.72■□□□□ 0.27
BRD9-213ENST00000495794 UGGT2Q9NYU1 1516 aa16.72■□□□□ 0.27
BRD9-213ENST00000495794 HOMER1Q86YM7 354 aa16.72■□□□□ 0.27
BRD9-213ENST00000495794 CWC22Q9HCG8 908 aaKnown RBP16.72■□□□□ 0.27
BRD9-213ENST00000495794 VSIG10Q8N0Z9 540 aa16.71■□□□□ 0.27
BRD9-213ENST00000495794 CEP89Q96ST8 783 aa16.71■□□□□ 0.27
BRD9-213ENST00000495794 SRGAP3O43295 1099 aa16.71■□□□□ 0.27
BRD9-213ENST00000495794 TBC1D2BQ9UPU7 963 aa16.71■□□□□ 0.27
BRD9-213ENST00000495794 FIBPO43427 364 aa16.7■□□□□ 0.26
BRD9-213ENST00000495794 ANKLE2Q86XL3 938 aa16.7■□□□□ 0.26
BRD9-213ENST00000495794 FAM13BQ9NYF5 915 aa16.7■□□□□ 0.26
BRD9-213ENST00000495794 CD109Q6YHK3 1445 aa16.7■□□□□ 0.26
BRD9-213ENST00000495794 NCBP3Q53F19 620 aaKnown RBP16.7■□□□□ 0.26
BRD9-213ENST00000495794 TNNT3P45378 269 aaPredicted RBP16.69■□□□□ 0.26
BRD9-213ENST00000495794 IDI1Q13907 227 aa16.69■□□□□ 0.26
BRD9-213ENST00000495794 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms