RNA–Protein interactions for RNA: ENST00000495581.1

SMIM29-208, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 911 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-208ENST00000495581 CDCA8Q53HL2 280 aa29.34■■■□□ 2.29
SMIM29-208ENST00000495581 ZNF772Q68DY9 489 aaPredicted RBP29.34■■■□□ 2.29
SMIM29-208ENST00000495581 TMC1Q8TDI8 760 aa29.34■■■□□ 2.29
SMIM29-208ENST00000495581 NGLY1Q96IV0 654 aa29.34■■■□□ 2.29
SMIM29-208ENST00000495581 ALS2Q96Q42 1657 aa29.33■■■□□ 2.29
SMIM29-208ENST00000495581 USP6P35125 1406 aa29.31■■■□□ 2.28
SMIM29-208ENST00000495581 PLEKHG5O94827 1062 aa29.31■■■□□ 2.28
SMIM29-208ENST00000495581 CABLES1Q8TDN4 633 aa29.31■■■□□ 2.28
SMIM29-208ENST00000495581 AFF2P51816 1311 aa29.3■■■□□ 2.28
SMIM29-208ENST00000495581 ABTB2Q8N961 1025 aa29.3■■■□□ 2.28
SMIM29-208ENST00000495581 NINLQ9Y2I6 1382 aa29.29■■■□□ 2.28
SMIM29-208ENST00000495581 HDGFL2Q7Z4V5 671 aaPredicted RBP29.28■■■□□ 2.28
SMIM29-208ENST00000495581 SLC12A5Q9H2X9 1139 aa29.27■■■□□ 2.28
SMIM29-208ENST00000495581 TERF2IPQ9NYB0 399 aa29.27■■■□□ 2.28
SMIM29-208ENST00000495581 CPSF1Q10570 1443 aaKnown RBP29.27■■■□□ 2.28
SMIM29-208ENST00000495581 KTN1Q86UP2 1357 aaKnown RBP29.26■■■□□ 2.28
SMIM29-208ENST00000495581 HSPA5P11021 654 aaKnown RBP29.24■■■□□ 2.27
SMIM29-208ENST00000495581 POTEAQ6S8J7 498 aa29.24■■■□□ 2.27
SMIM29-208ENST00000495581 NLRP13Q86W25 1043 aa29.24■■■□□ 2.27
SMIM29-208ENST00000495581 FNBP4Q8N3X1 1017 aaPredicted RBP29.24■■■□□ 2.27
SMIM29-208ENST00000495581 SSH2Q76I76 1423 aa29.23■■■□□ 2.27
SMIM29-208ENST00000495581 NUTM2GQ5VZR2 741 aa29.23■■■□□ 2.27
SMIM29-208ENST00000495581 USP21Q9UK80 565 aa29.22■■■□□ 2.27
SMIM29-208ENST00000495581 MARF1Q9Y4F3 1742 aaKnown RBP29.22■■■□□ 2.27
SMIM29-208ENST00000495581 TTC21BQ7Z4L5 1316 aa29.21■■■□□ 2.27
SMIM29-208ENST00000495581 TTC21AQ8NDW8 1320 aa29.21■■■□□ 2.27
SMIM29-208ENST00000495581 AKAP12Q02952 1782 aa29.21■■■□□ 2.27
SMIM29-208ENST00000495581 ABCA3Q99758 1704 aa29.2■■■□□ 2.26
SMIM29-208ENST00000495581 NLRP6P59044 892 aa29.19■■■□□ 2.26
SMIM29-208ENST00000495581 CD163L1Q9NR16 1453 aa29.18■■■□□ 2.26
SMIM29-208ENST00000495581 QTRT2Q9H974 415 aaKnown RBP29.17■■■□□ 2.26
SMIM29-208ENST00000495581 USP19O94966 1318 aa29.16■■■□□ 2.26
SMIM29-208ENST00000495581 A0A1W2PP64 1363 aa29.15■■■□□ 2.26
SMIM29-208ENST00000495581 TRPC5Q9UL62 973 aaPredicted RBP29.15■■■□□ 2.26
SMIM29-208ENST00000495581 MON2Q7Z3U7 1717 aa29.14■■■□□ 2.26
SMIM29-208ENST00000495581 EDC4Q6P2E9 1401 aaKnown RBP29.14■■■□□ 2.26
SMIM29-208ENST00000495581 FAM83GA6ND36 823 aa29.14■■■□□ 2.26
SMIM29-208ENST00000495581 RXRBP28702 533 aa29.13■■■□□ 2.25
SMIM29-208ENST00000495581 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.13■■■□□ 2.25
SMIM29-208ENST00000495581 PRDM11Q9NQV5 511 aa29.13■■■□□ 2.25
SMIM29-208ENST00000495581 CRYBG1Q9Y4K1 1723 aa29.13■■■□□ 2.25
SMIM29-208ENST00000495581 ANKRD36BQ8N2N9 1353 aa29.13■■■□□ 2.25
SMIM29-208ENST00000495581 SLIT2O94813 1529 aa29.12■■■□□ 2.25
SMIM29-208ENST00000495581 UNC5CLQ8IV45 518 aa29.12■■■□□ 2.25
SMIM29-208ENST00000495581 BCL9LQ86UU0 1499 aa29.11■■■□□ 2.25
SMIM29-208ENST00000495581 NRKQ7Z2Y5 1582 aa29.11■■■□□ 2.25
SMIM29-208ENST00000495581 GCP02774 474 aa29.11■■■□□ 2.25
SMIM29-208ENST00000495581 PHRF1Q9P1Y6 1649 aaKnown RBP29.1■■■□□ 2.25
SMIM29-208ENST00000495581 SOCS7O14512 581 aa29.1■■■□□ 2.25
SMIM29-208ENST00000495581 PIK3C2AO00443 1686 aa29.09■■■□□ 2.25
SMIM29-208ENST00000495581 ZC3H6P61129 1189 aaKnown RBP29.09■■■□□ 2.25
SMIM29-208ENST00000495581 RBM6P78332 1123 aaKnown RBP29.09■■■□□ 2.25
SMIM29-208ENST00000495581 KIAA0232Q92628 1395 aa29.09■■■□□ 2.25
SMIM29-208ENST00000495581 POLR3GLQ9BT43 218 aa29.08■■■□□ 2.25
SMIM29-208ENST00000495581 KCNH5Q8NCM2 988 aa29.07■■■□□ 2.24
SMIM29-208ENST00000495581 COL14A1Q05707 1796 aaKnown RBP29.06■■■□□ 2.24
SMIM29-208ENST00000495581 ATRNO75882 1429 aa29.06■■■□□ 2.24
SMIM29-208ENST00000495581 CPDO75976 1380 aa29.06■■■□□ 2.24
SMIM29-208ENST00000495581 BTG4Q9NY30 223 aa29.06■■■□□ 2.24
SMIM29-208ENST00000495581 USP31Q70CQ4 1352 aa29.05■■■□□ 2.24
SMIM29-208ENST00000495581 NME9Q86XW9 330 aa29.05■■■□□ 2.24
SMIM29-208ENST00000495581 NWD2Q9ULI1 1742 aa29.04■■■□□ 2.24
SMIM29-208ENST00000495581 SLIT3O75094 1523 aa29.04■■■□□ 2.24
SMIM29-208ENST00000495581 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.03■■■□□ 2.24
SMIM29-208ENST00000495581 PLCH1Q4KWH8 1693 aa29.02■■■□□ 2.24
SMIM29-208ENST00000495581 CHRNA2Q15822 529 aa29.02■■■□□ 2.24
SMIM29-208ENST00000495581 VPS72Q15906 364 aa29.01■■■□□ 2.23
SMIM29-208ENST00000495581 GJD4Q96KN9 370 aaPredicted RBP29.01■■■□□ 2.23
SMIM29-208ENST00000495581 ZRANB1Q9UGI0 708 aa29■■■□□ 2.23
SMIM29-208ENST00000495581 CDK12Q9NYV4 1490 aaPredicted RBP28.99■■■□□ 2.23
SMIM29-208ENST00000495581 CCDC9Q9Y3X0 531 aaKnown RBP28.98■■■□□ 2.23
SMIM29-208ENST00000495581 MYOM1P52179 1685 aa28.97■■■□□ 2.23
SMIM29-208ENST00000495581 SOX12O15370 315 aa28.97■■■□□ 2.23
SMIM29-208ENST00000495581 ZBTB7CA1YPR0 619 aa28.96■■■□□ 2.23
SMIM29-208ENST00000495581 C11orf95C9JLR9 678 aaPredicted RBP28.96■■■□□ 2.23
SMIM29-208ENST00000495581 COG3Q96JB2 828 aa28.96■■■□□ 2.23
SMIM29-208ENST00000495581 EVA1CP58658 441 aa28.95■■■□□ 2.22
SMIM29-208ENST00000495581 USP54Q70EL1 1684 aa28.94■■■□□ 2.22
SMIM29-208ENST00000495581 AATKQ6ZMQ8 1374 aa28.94■■■□□ 2.22
SMIM29-208ENST00000495581 ARHGEF25Q86VW2 580 aa28.94■■■□□ 2.22
SMIM29-208ENST00000495581 CARD14Q9BXL6 1004 aa28.93■■■□□ 2.22
SMIM29-208ENST00000495581 OVOS2A0A0J9YW53 1432 aa28.93■■■□□ 2.22
SMIM29-208ENST00000495581 OVOS2Q6IE36 1432 aa28.93■■■□□ 2.22
SMIM29-208ENST00000495581 STRN4Q9NRL3 753 aa28.92■■■□□ 2.22
SMIM29-208ENST00000495581 NRAPQ86VF7 1730 aa28.91■■■□□ 2.22
SMIM29-208ENST00000495581 FYB1O15117 783 aa28.91■■■□□ 2.22
SMIM29-208ENST00000495581 NSD3Q9BZ95 1437 aa28.91■■■□□ 2.22
SMIM29-208ENST00000495581 KIF7Q2M1P5 1343 aa28.91■■■□□ 2.22
SMIM29-208ENST00000495581 NFAT5O94916 1531 aa28.9■■■□□ 2.22
SMIM29-208ENST00000495581 CAMTA1Q9Y6Y1 1673 aa28.89■■■□□ 2.21
SMIM29-208ENST00000495581 RGS12O14924 1447 aa28.88■■■□□ 2.21
SMIM29-208ENST00000495581 GGNBP2Q9H3C7 697 aa28.88■■■□□ 2.21
SMIM29-208ENST00000495581 PANK3Q9H999 370 aa28.88■■■□□ 2.21
SMIM29-208ENST00000495581 LMO7Q8WWI1 1683 aa28.88■■■□□ 2.21
SMIM29-208ENST00000495581 CGNL1Q0VF96 1302 aa28.88■■■□□ 2.21
SMIM29-208ENST00000495581 SPATA31A5Q5VU36 1347 aa28.87■■■□□ 2.21
SMIM29-208ENST00000495581 SPATA31A7Q8IWB4 1347 aa28.87■■■□□ 2.21
SMIM29-208ENST00000495581 GLI3P10071 1580 aa28.86■■■□□ 2.21
SMIM29-208ENST00000495581 ONECUT3O60422 494 aaPredicted RBP28.83■■■□□ 2.21
SMIM29-208ENST00000495581 ZEB1P37275 1124 aaPredicted RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms