RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 PNPLA6Q8IY17 1366 aa23.66■■□□□ 1.38
HDAC6-235ENST00000495515 ANKRD36BQ8N2N9 1353 aa23.66■■□□□ 1.38
HDAC6-235ENST00000495515 KIF7Q2M1P5 1343 aa23.66■■□□□ 1.38
HDAC6-235ENST00000495515 SPATA31A6Q5VVP1 1343 aa23.66■■□□□ 1.38
HDAC6-235ENST00000495515 A0A1W2PP64 1363 aa23.65■■□□□ 1.38
HDAC6-235ENST00000495515 TTC21AQ8NDW8 1320 aa23.64■■□□□ 1.38
HDAC6-235ENST00000495515 CD163L1Q9NR16 1453 aa23.64■■□□□ 1.38
HDAC6-235ENST00000495515 ABTB2Q8N961 1025 aa23.63■■□□□ 1.37
HDAC6-235ENST00000495515 TTC21BQ7Z4L5 1316 aa23.62■■□□□ 1.37
HDAC6-235ENST00000495515 CCDC7Q96M83 1385 aa23.62■■□□□ 1.37
HDAC6-235ENST00000495515 SHPRHQ149N8 1683 aa23.61■■□□□ 1.37
HDAC6-235ENST00000495515 EDC4Q6P2E9 1401 aaKnown RBP23.61■■□□□ 1.37
HDAC6-235ENST00000495515 SSH2Q76I76 1423 aa23.61■■□□□ 1.37
HDAC6-235ENST00000495515 TRPM3Q9HCF6 1732 aaPredicted RBP23.61■■□□□ 1.37
HDAC6-235ENST00000495515 WASHC2AQ641Q2 1341 aa23.59■■□□□ 1.37
HDAC6-235ENST00000495515 HAP1P54257 671 aaPredicted RBP23.59■■□□□ 1.37
HDAC6-235ENST00000495515 NLRP13Q86W25 1043 aa23.59■■□□□ 1.37
HDAC6-235ENST00000495515 AKAP12Q02952 1782 aa23.59■■□□□ 1.37
HDAC6-235ENST00000495515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.58■■□□□ 1.37
HDAC6-235ENST00000495515 NUTM2BA6NNL0 878 aaPredicted RBP23.57■■□□□ 1.36
HDAC6-235ENST00000495515 NUTM2EB1AL46 878 aaPredicted RBP23.57■■□□□ 1.36
HDAC6-235ENST00000495515 NUTM2AQ8IVF1 878 aaPredicted RBP23.57■■□□□ 1.36
HDAC6-235ENST00000495515 MON2Q7Z3U7 1717 aa23.56■■□□□ 1.36
HDAC6-235ENST00000495515 NLRP6P59044 892 aa23.56■■□□□ 1.36
HDAC6-235ENST00000495515 COL22A1Q8NFW1 1626 aaPredicted RBP23.55■■□□□ 1.36
HDAC6-235ENST00000495515 MYOM1P52179 1685 aa23.55■■□□□ 1.36
HDAC6-235ENST00000495515 ALS2Q96Q42 1657 aa23.55■■□□□ 1.36
HDAC6-235ENST00000495515 NUTM2GQ5VZR2 741 aa23.55■■□□□ 1.36
HDAC6-235ENST00000495515 PANK3Q9H999 370 aa23.55■■□□□ 1.36
HDAC6-235ENST00000495515 PLEKHG5O94827 1062 aa23.54■■□□□ 1.36
HDAC6-235ENST00000495515 MEX3CQ5U5Q3 659 aaKnown RBP23.53■■□□□ 1.36
HDAC6-235ENST00000495515 NSD3Q9BZ95 1437 aa23.52■■□□□ 1.36
HDAC6-235ENST00000495515 CABLES1Q8TDN4 633 aa23.52■■□□□ 1.36
HDAC6-235ENST00000495515 CARD14Q9BXL6 1004 aa23.52■■□□□ 1.36
HDAC6-235ENST00000495515 NRKQ7Z2Y5 1582 aa23.52■■□□□ 1.36
HDAC6-235ENST00000495515 NME9Q86XW9 330 aa23.51■■□□□ 1.35
HDAC6-235ENST00000495515 RGS17Q9UGC6 210 aaPredicted RBP23.51■■□□□ 1.35
HDAC6-235ENST00000495515 USP19O94966 1318 aa23.5■■□□□ 1.35
HDAC6-235ENST00000495515 CGNL1Q0VF96 1302 aa23.5■■□□□ 1.35
HDAC6-235ENST00000495515 USP31Q70CQ4 1352 aa23.5■■□□□ 1.35
HDAC6-235ENST00000495515 ADAMTS2O95450 1211 aa23.49■■□□□ 1.35
HDAC6-235ENST00000495515 KNSTRNQ9Y448 316 aa23.49■■□□□ 1.35
HDAC6-235ENST00000495515 KCNH5Q8NCM2 988 aa23.48■■□□□ 1.35
HDAC6-235ENST00000495515 COG3Q96JB2 828 aa23.48■■□□□ 1.35
HDAC6-235ENST00000495515 LRP6O75581 1613 aa23.47■■□□□ 1.35
HDAC6-235ENST00000495515 PIK3C2AO00443 1686 aa23.46■■□□□ 1.35
HDAC6-235ENST00000495515 FYB1O15117 783 aa23.46■■□□□ 1.35
HDAC6-235ENST00000495515 GCP02774 474 aa23.46■■□□□ 1.35
HDAC6-235ENST00000495515 ZNF316A6NFI3 1004 aaPredicted RBP23.43■■□□□ 1.34
HDAC6-235ENST00000495515 NGLY1Q96IV0 654 aa23.43■■□□□ 1.34
HDAC6-235ENST00000495515 C8orf37Q96NL8 207 aa23.43■■□□□ 1.34
HDAC6-235ENST00000495515 GGNBP2Q9H3C7 697 aa23.43■■□□□ 1.34
HDAC6-235ENST00000495515 ZRANB1Q9UGI0 708 aa23.43■■□□□ 1.34
HDAC6-235ENST00000495515 OVOS2A0A0J9YW53 1432 aa23.42■■□□□ 1.34
HDAC6-235ENST00000495515 OVOS2Q6IE36 1432 aa23.42■■□□□ 1.34
HDAC6-235ENST00000495515 PRDM11Q9NQV5 511 aa23.41■■□□□ 1.34
HDAC6-235ENST00000495515 SLIT3O75094 1523 aa23.41■■□□□ 1.34
HDAC6-235ENST00000495515 NSD2O96028 1365 aa23.4■■□□□ 1.34
HDAC6-235ENST00000495515 ZC3H6P61129 1189 aaKnown RBP23.4■■□□□ 1.34
HDAC6-235ENST00000495515 SOX12O15370 315 aa23.39■■□□□ 1.33
HDAC6-235ENST00000495515 POTEAQ6S8J7 498 aa23.39■■□□□ 1.33
HDAC6-235ENST00000495515 CPDO75976 1380 aa23.39■■□□□ 1.33
HDAC6-235ENST00000495515 PHRF1Q9P1Y6 1649 aaKnown RBP23.38■■□□□ 1.33
HDAC6-235ENST00000495515 PER1O15534 1290 aaPredicted RBP23.38■■□□□ 1.33
HDAC6-235ENST00000495515 ABCA3Q99758 1704 aa23.38■■□□□ 1.33
HDAC6-235ENST00000495515 KIAA0232Q92628 1395 aa23.38■■□□□ 1.33
HDAC6-235ENST00000495515 CRYBG1Q9Y4K1 1723 aa23.37■■□□□ 1.33
HDAC6-235ENST00000495515 USP54Q70EL1 1684 aa23.37■■□□□ 1.33
HDAC6-235ENST00000495515 FAM83GA6ND36 823 aa23.36■■□□□ 1.33
HDAC6-235ENST00000495515 AMER1Q5JTC6 1135 aaPredicted RBP23.35■■□□□ 1.33
HDAC6-235ENST00000495515 ZNF772Q68DY9 489 aaPredicted RBP23.35■■□□□ 1.33
HDAC6-235ENST00000495515 FNBP4Q8N3X1 1017 aaPredicted RBP23.35■■□□□ 1.33
HDAC6-235ENST00000495515 AFF2P51816 1311 aa23.34■■□□□ 1.33
HDAC6-235ENST00000495515 ZBTB7CA1YPR0 619 aa23.34■■□□□ 1.33
HDAC6-235ENST00000495515 DDX10Q13206 875 aaKnown RBP23.34■■□□□ 1.33
HDAC6-235ENST00000495515 ARHGEF25Q86VW2 580 aa23.34■■□□□ 1.33
HDAC6-235ENST00000495515 KIF20BQ96Q89 1820 aa23.33■■□□□ 1.33
HDAC6-235ENST00000495515 USP21Q9UK80 565 aa23.33■■□□□ 1.33
HDAC6-235ENST00000495515 NPC1L1Q9UHC9 1359 aa23.32■■□□□ 1.32
HDAC6-235ENST00000495515 CHRNA2Q15822 529 aa23.32■■□□□ 1.32
HDAC6-235ENST00000495515 MORC1Q86VD1 984 aa23.32■■□□□ 1.32
HDAC6-235ENST00000495515 MARF1Q9Y4F3 1742 aaKnown RBP23.31■■□□□ 1.32
HDAC6-235ENST00000495515 AATKQ6ZMQ8 1374 aa23.31■■□□□ 1.32
HDAC6-235ENST00000495515 NFAT5O94916 1531 aa23.31■■□□□ 1.32
HDAC6-235ENST00000495515 BTG4Q9NY30 223 aa23.3■■□□□ 1.32
HDAC6-235ENST00000495515 COL14A1Q05707 1796 aaKnown RBP23.29■■□□□ 1.32
HDAC6-235ENST00000495515 SLIT2O94813 1529 aa23.29■■□□□ 1.32
HDAC6-235ENST00000495515 CC2D1BQ5T0F9 858 aaKnown RBP23.29■■□□□ 1.32
HDAC6-235ENST00000495515 UNC5CLQ8IV45 518 aa23.29■■□□□ 1.32
HDAC6-235ENST00000495515 AMPHP49418 695 aa23.26■■□□□ 1.31
HDAC6-235ENST00000495515 EVA1CP58658 441 aa23.26■■□□□ 1.31
HDAC6-235ENST00000495515 TRPC5Q9UL62 973 aaPredicted RBP23.26■■□□□ 1.31
HDAC6-235ENST00000495515 MAP3K19Q56UN5 1328 aa23.26■■□□□ 1.31
HDAC6-235ENST00000495515 BCL9LQ86UU0 1499 aa23.25■■□□□ 1.31
HDAC6-235ENST00000495515 TNNT2P45379 298 aaPredicted RBP23.25■■□□□ 1.31
HDAC6-235ENST00000495515 ABCC6O95255 1503 aa23.24■■□□□ 1.31
HDAC6-235ENST00000495515 RRS1Q15050 365 aaKnown RBP23.24■■□□□ 1.31
HDAC6-235ENST00000495515 QTRT2Q9H974 415 aaKnown RBP23.24■■□□□ 1.31
HDAC6-235ENST00000495515 KIF24Q5T7B8 1368 aa23.24■■□□□ 1.31
HDAC6-235ENST00000495515 ANKRD26Q9UPS8 1709 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms