RNA–Protein interactions for RNA: ENST00000495183.5

HLA-A-207, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-207ENST00000495183 TRPM3Q9HCF6 1732 aaPredicted RBP33.8■■■■□ 3
HLA-A-207ENST00000495183 TNS3Q68CZ2 1445 aa33.8■■■■□ 3
HLA-A-207ENST00000495183 BRD4O60885 1362 aaPredicted RBP33.79■■■■□ 3
HLA-A-207ENST00000495183 JCADQ9P266 1359 aa33.79■■■■□ 3
HLA-A-207ENST00000495183 SSH2Q76I76 1423 aa33.77■■■■□ 3
HLA-A-207ENST00000495183 TTC21BQ7Z4L5 1316 aa33.77■■■■□ 3
HLA-A-207ENST00000495183 MON2Q7Z3U7 1717 aa33.76■■■■□ 3
HLA-A-207ENST00000495183 PNPLA6Q8IY17 1366 aa33.76■■■□□ 2.99
HLA-A-207ENST00000495183 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.75■■■□□ 2.99
HLA-A-207ENST00000495183 PANK3Q9H999 370 aa33.75■■■□□ 2.99
HLA-A-207ENST00000495183 ABTB2Q8N961 1025 aa33.75■■■□□ 2.99
HLA-A-207ENST00000495183 EDC4Q6P2E9 1401 aaKnown RBP33.74■■■□□ 2.99
HLA-A-207ENST00000495183 ARHGEF10O15013 1369 aa33.74■■■□□ 2.99
HLA-A-207ENST00000495183 CARD14Q9BXL6 1004 aa33.73■■■□□ 2.99
HLA-A-207ENST00000495183 NUTM2GQ5VZR2 741 aa33.72■■■□□ 2.99
HLA-A-207ENST00000495183 TTC21AQ8NDW8 1320 aa33.72■■■□□ 2.99
HLA-A-207ENST00000495183 ALS2Q96Q42 1657 aa33.71■■■□□ 2.99
HLA-A-207ENST00000495183 PLEKHG5O94827 1062 aa33.7■■■□□ 2.99
HLA-A-207ENST00000495183 NRKQ7Z2Y5 1582 aa33.7■■■□□ 2.99
HLA-A-207ENST00000495183 SHPRHQ149N8 1683 aa33.69■■■□□ 2.98
HLA-A-207ENST00000495183 ZNF316A6NFI3 1004 aaPredicted RBP33.67■■■□□ 2.98
HLA-A-207ENST00000495183 NSD3Q9BZ95 1437 aa33.66■■■□□ 2.98
HLA-A-207ENST00000495183 NME9Q86XW9 330 aa33.66■■■□□ 2.98
HLA-A-207ENST00000495183 NLRP6P59044 892 aa33.65■■■□□ 2.98
HLA-A-207ENST00000495183 CABLES1Q8TDN4 633 aa33.65■■■□□ 2.98
HLA-A-207ENST00000495183 SPATA31A6Q5VVP1 1343 aa33.64■■■□□ 2.98
HLA-A-207ENST00000495183 NUTM2BA6NNL0 878 aaPredicted RBP33.64■■■□□ 2.98
HLA-A-207ENST00000495183 NUTM2EB1AL46 878 aaPredicted RBP33.64■■■□□ 2.98
HLA-A-207ENST00000495183 NLRP13Q86W25 1043 aa33.64■■■□□ 2.98
HLA-A-207ENST00000495183 NUTM2AQ8IVF1 878 aaPredicted RBP33.64■■■□□ 2.98
HLA-A-207ENST00000495183 COL22A1Q8NFW1 1626 aaPredicted RBP33.63■■■□□ 2.97
HLA-A-207ENST00000495183 PIK3C2AO00443 1686 aa33.62■■■□□ 2.97
HLA-A-207ENST00000495183 ZRANB1Q9UGI0 708 aa33.62■■■□□ 2.97
HLA-A-207ENST00000495183 HAP1P54257 671 aaPredicted RBP33.6■■■□□ 2.97
HLA-A-207ENST00000495183 FYB1O15117 783 aa33.58■■■□□ 2.97
HLA-A-207ENST00000495183 KNSTRNQ9Y448 316 aa33.58■■■□□ 2.97
HLA-A-207ENST00000495183 CGNL1Q0VF96 1302 aa33.57■■■□□ 2.96
HLA-A-207ENST00000495183 MED1Q15648 1581 aaPredicted RBP33.56■■■□□ 2.96
HLA-A-207ENST00000495183 USP31Q70CQ4 1352 aa33.56■■■□□ 2.96
HLA-A-207ENST00000495183 GGNBP2Q9H3C7 697 aa33.55■■■□□ 2.96
HLA-A-207ENST00000495183 DDX10Q13206 875 aaKnown RBP33.55■■■□□ 2.96
HLA-A-207ENST00000495183 USP19O94966 1318 aa33.54■■■□□ 2.96
HLA-A-207ENST00000495183 PER1O15534 1290 aaPredicted RBP33.54■■■□□ 2.96
HLA-A-207ENST00000495183 ADAMTS2O95450 1211 aa33.52■■■□□ 2.96
HLA-A-207ENST00000495183 COG3Q96JB2 828 aa33.52■■■□□ 2.96
HLA-A-207ENST00000495183 LRP6O75581 1613 aa33.52■■■□□ 2.96
HLA-A-207ENST00000495183 GCP02774 474 aa33.5■■■□□ 2.95
HLA-A-207ENST00000495183 OVOS2A0A0J9YW53 1432 aa33.49■■■□□ 2.95
HLA-A-207ENST00000495183 OVOS2Q6IE36 1432 aa33.49■■■□□ 2.95
HLA-A-207ENST00000495183 CRYBG1Q9Y4K1 1723 aa33.49■■■□□ 2.95
HLA-A-207ENST00000495183 SOX12O15370 315 aa33.49■■■□□ 2.95
HLA-A-207ENST00000495183 ABCA3Q99758 1704 aa33.49■■■□□ 2.95
HLA-A-207ENST00000495183 KIF20BQ96Q89 1820 aa33.48■■■□□ 2.95
HLA-A-207ENST00000495183 MEX3CQ5U5Q3 659 aaKnown RBP33.48■■■□□ 2.95
HLA-A-207ENST00000495183 MARF1Q9Y4F3 1742 aaKnown RBP33.47■■■□□ 2.95
HLA-A-207ENST00000495183 PHRF1Q9P1Y6 1649 aaKnown RBP33.47■■■□□ 2.95
HLA-A-207ENST00000495183 AMER1Q5JTC6 1135 aaPredicted RBP33.46■■■□□ 2.95
HLA-A-207ENST00000495183 KCNH5Q8NCM2 988 aa33.46■■■□□ 2.95
HLA-A-207ENST00000495183 SLIT3O75094 1523 aa33.46■■■□□ 2.95
HLA-A-207ENST00000495183 ZC3H6P61129 1189 aaKnown RBP33.45■■■□□ 2.95
HLA-A-207ENST00000495183 USP54Q70EL1 1684 aa33.45■■■□□ 2.94
HLA-A-207ENST00000495183 NSD2O96028 1365 aa33.42■■■□□ 2.94
HLA-A-207ENST00000495183 C8orf37Q96NL8 207 aa33.4■■■□□ 2.94
HLA-A-207ENST00000495183 KIAA0232Q92628 1395 aa33.4■■■□□ 2.94
HLA-A-207ENST00000495183 CNGB1Q14028 1251 aaPredicted RBP33.39■■■□□ 2.94
HLA-A-207ENST00000495183 CC2D1BQ5T0F9 858 aaKnown RBP33.39■■■□□ 2.94
HLA-A-207ENST00000495183 PRDM11Q9NQV5 511 aa33.39■■■□□ 2.94
HLA-A-207ENST00000495183 ZBTB7CA1YPR0 619 aa33.37■■■□□ 2.93
HLA-A-207ENST00000495183 NGLY1Q96IV0 654 aa33.37■■■□□ 2.93
HLA-A-207ENST00000495183 FAM83GA6ND36 823 aa33.37■■■□□ 2.93
HLA-A-207ENST00000495183 FBLN1P23142 703 aa33.37■■■□□ 2.93
HLA-A-207ENST00000495183 NFAT5O94916 1531 aa33.36■■■□□ 2.93
HLA-A-207ENST00000495183 MORC1Q86VD1 984 aa33.36■■■□□ 2.93
HLA-A-207ENST00000495183 CHRNA2Q15822 529 aa33.35■■■□□ 2.93
HLA-A-207ENST00000495183 CPDO75976 1380 aa33.35■■■□□ 2.93
HLA-A-207ENST00000495183 NPC1L1Q9UHC9 1359 aa33.34■■■□□ 2.93
HLA-A-207ENST00000495183 TNNT2P45379 298 aaPredicted RBP33.34■■■□□ 2.93
HLA-A-207ENST00000495183 ARHGEF25Q86VW2 580 aa33.34■■■□□ 2.93
HLA-A-207ENST00000495183 ANKRD26Q9UPS8 1709 aa33.33■■■□□ 2.93
HLA-A-207ENST00000495183 RRS1Q15050 365 aaKnown RBP33.29■■■□□ 2.92
HLA-A-207ENST00000495183 AFF2P51816 1311 aa33.27■■■□□ 2.92
HLA-A-207ENST00000495183 FNBP4Q8N3X1 1017 aaPredicted RBP33.27■■■□□ 2.92
HLA-A-207ENST00000495183 MAP3K19Q56UN5 1328 aa33.26■■■□□ 2.92
HLA-A-207ENST00000495183 PHF23Q9BUL5 403 aaPredicted RBP33.26■■■□□ 2.91
HLA-A-207ENST00000495183 BTG4Q9NY30 223 aa33.26■■■□□ 2.91
HLA-A-207ENST00000495183 COL14A1Q05707 1796 aaKnown RBP33.25■■■□□ 2.91
HLA-A-207ENST00000495183 AATKQ6ZMQ8 1374 aa33.25■■■□□ 2.91
HLA-A-207ENST00000495183 USP21Q9UK80 565 aa33.23■■■□□ 2.91
HLA-A-207ENST00000495183 SLIT2O94813 1529 aa33.23■■■□□ 2.91
HLA-A-207ENST00000495183 AMPHP49418 695 aa33.22■■■□□ 2.91
HLA-A-207ENST00000495183 LTN1O94822 1766 aa33.22■■■□□ 2.91
HLA-A-207ENST00000495183 AXIN2Q9Y2T1 843 aa33.21■■■□□ 2.91
HLA-A-207ENST00000495183 EMILIN1Q9Y6C2 1016 aa33.21■■■□□ 2.91
HLA-A-207ENST00000495183 POLKQ9UBT6 870 aa33.2■■■□□ 2.91
HLA-A-207ENST00000495183 PLCH1Q4KWH8 1693 aa33.2■■■□□ 2.91
HLA-A-207ENST00000495183 PPM1GO15355 546 aaPredicted RBP33.19■■■□□ 2.9
HLA-A-207ENST00000495183 UNC5CLQ8IV45 518 aa33.19■■■□□ 2.9
HLA-A-207ENST00000495183 CAMTA1Q9Y6Y1 1673 aa33.18■■■□□ 2.9
HLA-A-207ENST00000495183 BCL9LQ86UU0 1499 aa33.18■■■□□ 2.9
HLA-A-207ENST00000495183 IP6K1Q92551 441 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms