RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 KCNA6P17658 529 aa21.85■■□□□ 1.09
ATG4B-225ENST00000494465 PLEKHG3A1L390 1219 aa21.84■■□□□ 1.09
ATG4B-225ENST00000494465 NME9Q86XW9 330 aa21.84■■□□□ 1.09
ATG4B-225ENST00000494465 ZNF692Q9BU19 519 aaPredicted RBP21.84■■□□□ 1.09
ATG4B-225ENST00000494465 RGPD8O14715 1765 aaPredicted RBP21.84■■□□□ 1.09
ATG4B-225ENST00000494465 NGEFQ8N5V2 710 aa21.84■■□□□ 1.09
ATG4B-225ENST00000494465 GOLGA2Q08379 1002 aa21.83■■□□□ 1.09
ATG4B-225ENST00000494465 DUSP27Q5VZP5 1158 aa21.83■■□□□ 1.09
ATG4B-225ENST00000494465 RUNDC1Q96C34 613 aa21.83■■□□□ 1.08
ATG4B-225ENST00000494465 NUTM2FA1L443 756 aa21.82■■□□□ 1.08
ATG4B-225ENST00000494465 ZRANB1Q9UGI0 708 aa21.82■■□□□ 1.08
ATG4B-225ENST00000494465 TRMT2AQ8IZ69 625 aaKnown RBP21.81■■□□□ 1.08
ATG4B-225ENST00000494465 ACEP12821 1306 aa21.81■■□□□ 1.08
ATG4B-225ENST00000494465 SLFN5Q08AF3 891 aa21.81■■□□□ 1.08
ATG4B-225ENST00000494465 PPP4R2Q9NY27 417 aa21.81■■□□□ 1.08
ATG4B-225ENST00000494465 FBLN1P23142 703 aa21.8■■□□□ 1.08
ATG4B-225ENST00000494465 POLKQ9UBT6 870 aa21.8■■□□□ 1.08
ATG4B-225ENST00000494465 RRP1P56182 461 aaKnown RBP21.8■■□□□ 1.08
ATG4B-225ENST00000494465 U2AF1L5P0DN76 240 aaPredicted RBP21.79■■□□□ 1.08
ATG4B-225ENST00000494465 U2AF1Q01081 240 aaKnown RBP eCLIP21.79■■□□□ 1.08
ATG4B-225ENST00000494465 SPINK5Q9NQ38 1064 aaPredicted RBP21.79■■□□□ 1.08
ATG4B-225ENST00000494465 USP6P35125 1406 aa21.79■■□□□ 1.08
ATG4B-225ENST00000494465 FMN2Q9NZ56 1722 aa21.78■■□□□ 1.08
ATG4B-225ENST00000494465 TCP11L2Q8N4U5 519 aa21.78■■□□□ 1.08
ATG4B-225ENST00000494465 PHF23Q9BUL5 403 aaPredicted RBP21.78■■□□□ 1.08
ATG4B-225ENST00000494465 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
ATG4B-225ENST00000494465 AATKQ6ZMQ8 1374 aa21.77■■□□□ 1.08
ATG4B-225ENST00000494465 SSH2Q76I76 1423 aa21.77■■□□□ 1.08
ATG4B-225ENST00000494465 NALCNQ8IZF0 1738 aa21.77■■□□□ 1.08
ATG4B-225ENST00000494465 WWC1Q8IX03 1113 aa21.77■■□□□ 1.08
ATG4B-225ENST00000494465 NPHP4O75161 1426 aaPredicted RBP21.76■■□□□ 1.07
ATG4B-225ENST00000494465 TTC21BQ7Z4L5 1316 aa21.76■■□□□ 1.07
ATG4B-225ENST00000494465 DIAPH1O60610 1272 aaKnown RBP21.75■■□□□ 1.07
ATG4B-225ENST00000494465 PELP1Q8IZL8 1130 aaKnown RBP21.75■■□□□ 1.07
ATG4B-225ENST00000494465 COG3Q96JB2 828 aa21.75■■□□□ 1.07
ATG4B-225ENST00000494465 PLEKHF1Q96S99 279 aa21.75■■□□□ 1.07
ATG4B-225ENST00000494465 ANKARQ7Z5J8 1434 aa21.74■■□□□ 1.07
ATG4B-225ENST00000494465 RRP7AQ9Y3A4 280 aaKnown RBP21.74■■□□□ 1.07
ATG4B-225ENST00000494465 OVOS2A0A0J9YW53 1432 aa21.74■■□□□ 1.07
ATG4B-225ENST00000494465 OVOS2Q6IE36 1432 aa21.74■■□□□ 1.07
ATG4B-225ENST00000494465 CDK12Q9NYV4 1490 aaPredicted RBP21.73■■□□□ 1.07
ATG4B-225ENST00000494465 U2SURPO15042 1029 aaKnown RBP21.73■■□□□ 1.07
ATG4B-225ENST00000494465 E9PSI1 815 aa21.73■■□□□ 1.07
ATG4B-225ENST00000494465 NCBP3Q53F19 620 aaKnown RBP21.73■■□□□ 1.07
ATG4B-225ENST00000494465 EMILIN1Q9Y6C2 1016 aa21.73■■□□□ 1.07
ATG4B-225ENST00000494465 CCDC27Q2M243 656 aa21.72■■□□□ 1.07
ATG4B-225ENST00000494465 PMFBP1Q8TBY8 1022 aa21.71■■□□□ 1.07
ATG4B-225ENST00000494465 NEUROD2Q15784 382 aa21.7■■□□□ 1.07
ATG4B-225ENST00000494465 PPM1GO15355 546 aaPredicted RBP21.69■■□□□ 1.06
ATG4B-225ENST00000494465 B4GALNT3Q6L9W6 998 aa21.69■■□□□ 1.06
ATG4B-225ENST00000494465 LRRC7Q96NW7 1537 aa21.68■■□□□ 1.06
ATG4B-225ENST00000494465 NWD1Q149M9 1564 aa21.68■■□□□ 1.06
ATG4B-225ENST00000494465 RRS1Q15050 365 aaKnown RBP21.67■■□□□ 1.06
ATG4B-225ENST00000494465 WDR63Q8IWG1 891 aa21.67■■□□□ 1.06
ATG4B-225ENST00000494465 USP31Q70CQ4 1352 aa21.66■■□□□ 1.06
ATG4B-225ENST00000494465 TTC21AQ8NDW8 1320 aa21.66■■□□□ 1.06
ATG4B-225ENST00000494465 PIK3C2AO00443 1686 aa21.66■■□□□ 1.06
ATG4B-225ENST00000494465 IL13P35225 146 aa21.66■■□□□ 1.06
ATG4B-225ENST00000494465 ADGRL3Q9HAR2 1447 aa21.65■■□□□ 1.06
ATG4B-225ENST00000494465 PLIN1O60240 522 aa21.65■■□□□ 1.06
ATG4B-225ENST00000494465 NGDNQ8NEJ9 315 aaKnown RBP21.65■■□□□ 1.06
ATG4B-225ENST00000494465 RBM33Q96EV2 1170 aaKnown RBP21.65■■□□□ 1.06
ATG4B-225ENST00000494465 FCHSD2O94868 740 aa21.64■■□□□ 1.05
ATG4B-225ENST00000494465 TMPOP42166 694 aaKnown RBP21.64■■□□□ 1.05
ATG4B-225ENST00000494465 RSPH6AQ9H0K4 717 aa21.64■■□□□ 1.05
ATG4B-225ENST00000494465 PEAK1Q9H792 1746 aa21.63■■□□□ 1.05
ATG4B-225ENST00000494465 MARF1Q9Y4F3 1742 aaKnown RBP21.62■■□□□ 1.05
ATG4B-225ENST00000494465 EXOC6Q8TAG9 804 aa21.62■■□□□ 1.05
ATG4B-225ENST00000494465 MAPK8IP3Q9UPT6 1336 aa21.61■■□□□ 1.05
ATG4B-225ENST00000494465 TRIM35Q9UPQ4 493 aa21.61■■□□□ 1.05
ATG4B-225ENST00000494465 PNNQ9H307 717 aaKnown RBP21.61■■□□□ 1.05
ATG4B-225ENST00000494465 USP54Q70EL1 1684 aa21.6■■□□□ 1.05
ATG4B-225ENST00000494465 PRKAR2BP31323 418 aa21.59■■□□□ 1.05
ATG4B-225ENST00000494465 TSHZ2Q9NRE2 1034 aa21.58■■□□□ 1.05
ATG4B-225ENST00000494465 HMOX1P09601 288 aa21.57■■□□□ 1.04
ATG4B-225ENST00000494465 C20orf194Q5TEA3 1177 aa21.56■■□□□ 1.04
ATG4B-225ENST00000494465 PHF8Q9UPP1 1060 aa21.56■■□□□ 1.04
ATG4B-225ENST00000494465 CCDC136Q96JN2 1154 aa21.55■■□□□ 1.04
ATG4B-225ENST00000494465 RGPD1P0DJD0 1748 aa21.55■■□□□ 1.04
ATG4B-225ENST00000494465 RIPK4P57078 832 aa21.55■■□□□ 1.04
ATG4B-225ENST00000494465 PHACTR3Q96KR7 559 aa21.55■■□□□ 1.04
ATG4B-225ENST00000494465 BCAR3O75815 825 aa21.54■■□□□ 1.04
ATG4B-225ENST00000494465 EIF4A2Q14240 407 aaKnown RBP21.54■■□□□ 1.04
ATG4B-225ENST00000494465 CRBNQ96SW2 442 aa21.54■■□□□ 1.04
ATG4B-225ENST00000494465 STRCP1A6NGW2 1772 aa21.53■■□□□ 1.04
ATG4B-225ENST00000494465 MYH16Q9H6N6 1097 aa21.53■■□□□ 1.04
ATG4B-225ENST00000494465 MAP3K19Q56UN5 1328 aa21.53■■□□□ 1.04
ATG4B-225ENST00000494465 DLG5Q8TDM6 1919 aa21.52■■□□□ 1.04
ATG4B-225ENST00000494465 HSP90AB2PQ58FF8 381 aa21.52■■□□□ 1.04
ATG4B-225ENST00000494465 IL16Q14005 1332 aa21.52■■□□□ 1.03
ATG4B-225ENST00000494465 SOX12O15370 315 aa21.51■■□□□ 1.03
ATG4B-225ENST00000494465 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.51■■□□□ 1.03
ATG4B-225ENST00000494465 NLRP6P59044 892 aa21.5■■□□□ 1.03
ATG4B-225ENST00000494465 NFE2L2Q16236 605 aa21.5■■□□□ 1.03
ATG4B-225ENST00000494465 FANCIQ9NVI1 1328 aa21.5■■□□□ 1.03
ATG4B-225ENST00000494465 SBNO1A3KN83 1393 aa21.5■■□□□ 1.03
ATG4B-225ENST00000494465 PROSER2Q86WR7 435 aaPredicted RBP21.49■■□□□ 1.03
ATG4B-225ENST00000494465 ESCO1Q5FWF5 840 aa21.48■■□□□ 1.03
ATG4B-225ENST00000494465 C14orf37Q86TY3 774 aa21.48■■□□□ 1.03
ATG4B-225ENST00000494465 FLT4P35916 1363 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms