RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ITSN1Q15811 1721 aa12.56□□□□□ -0.4
ITGB1-217ENST00000494395 PRR36Q9H6K5 1346 aa12.56□□□□□ -0.4
ITGB1-217ENST00000494395 NUTM2FA1L443 756 aa12.55□□□□□ -0.4
ITGB1-217ENST00000494395 WASLO00401 505 aaPredicted RBP12.55□□□□□ -0.4
ITGB1-217ENST00000494395 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
ITGB1-217ENST00000494395 HIRIP3Q9BW71 556 aaPredicted RBP12.55□□□□□ -0.4
ITGB1-217ENST00000494395 COL22A1Q8NFW1 1626 aaPredicted RBP12.55□□□□□ -0.4
ITGB1-217ENST00000494395 NUBP1P53384 320 aa12.54□□□□□ -0.4
ITGB1-217ENST00000494395 ESCO1Q5FWF5 840 aa12.54□□□□□ -0.4
ITGB1-217ENST00000494395 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
ITGB1-217ENST00000494395 LRP6O75581 1613 aa12.54□□□□□ -0.4
ITGB1-217ENST00000494395 EIF3AQ14152 1382 aaKnown RBP12.54□□□□□ -0.4
ITGB1-217ENST00000494395 PNPLA6Q8IY17 1366 aa12.54□□□□□ -0.4
ITGB1-217ENST00000494395 NPHP3Q7Z494 1330 aa12.53□□□□□ -0.4
ITGB1-217ENST00000494395 TRPM3Q9HCF6 1732 aaPredicted RBP12.53□□□□□ -0.4
ITGB1-217ENST00000494395 TIMELESSQ9UNS1 1208 aa12.52□□□□□ -0.41
ITGB1-217ENST00000494395 SBNO2Q9Y2G9 1366 aa12.52□□□□□ -0.41
ITGB1-217ENST00000494395 FOXO3O43524 673 aa12.51□□□□□ -0.41
ITGB1-217ENST00000494395 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
ITGB1-217ENST00000494395 GSE1Q14687 1217 aa12.51□□□□□ -0.41
ITGB1-217ENST00000494395 LRRC59Q96AG4 307 aaKnown RBP12.51□□□□□ -0.41
ITGB1-217ENST00000494395 PHF8Q9UPP1 1060 aa12.51□□□□□ -0.41
ITGB1-217ENST00000494395 SPATA31A6Q5VVP1 1343 aa12.51□□□□□ -0.41
ITGB1-217ENST00000494395 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
ITGB1-217ENST00000494395 DISP3Q9P2K9 1392 aa12.5□□□□□ -0.41
ITGB1-217ENST00000494395 ALS2Q96Q42 1657 aa12.49□□□□□ -0.41
ITGB1-217ENST00000494395 CARD11Q9BXL7 1154 aa12.49□□□□□ -0.41
ITGB1-217ENST00000494395 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
ITGB1-217ENST00000494395 CCER1Q8TC90 406 aaPredicted RBP12.48□□□□□ -0.41
ITGB1-217ENST00000494395 NUDT16Q96DE0 195 aaKnown RBP12.48□□□□□ -0.41
ITGB1-217ENST00000494395 ABCA3Q99758 1704 aa12.48□□□□□ -0.41
ITGB1-217ENST00000494395 TNS3Q68CZ2 1445 aa12.47□□□□□ -0.41
ITGB1-217ENST00000494395 SBNO1A3KN83 1393 aa12.47□□□□□ -0.41
ITGB1-217ENST00000494395 POLR3AO14802 1390 aaPredicted RBP12.47□□□□□ -0.41
ITGB1-217ENST00000494395 SPATA31A3Q5VYP0 1347 aa12.47□□□□□ -0.41
ITGB1-217ENST00000494395 DCAF8Q5TAQ9 597 aa12.47□□□□□ -0.41
ITGB1-217ENST00000494395 PMFBP1Q8TBY8 1022 aa12.47□□□□□ -0.41
ITGB1-217ENST00000494395 BBXQ8WY36 941 aaPredicted RBP12.47□□□□□ -0.41
ITGB1-217ENST00000494395 MARF1Q9Y4F3 1742 aaKnown RBP12.46□□□□□ -0.41
ITGB1-217ENST00000494395 CRYBG1Q9Y4K1 1723 aa12.46□□□□□ -0.41
ITGB1-217ENST00000494395 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.41
ITGB1-217ENST00000494395 RGS17Q9UGC6 210 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-217ENST00000494395 PLEKHG3A1L390 1219 aa12.45□□□□□ -0.42
ITGB1-217ENST00000494395 HAP1P54257 671 aaPredicted RBP12.45□□□□□ -0.42
ITGB1-217ENST00000494395 CCDC61Q9Y6R9 512 aa12.45□□□□□ -0.42
ITGB1-217ENST00000494395 EVC2Q86UK5 1308 aa12.44□□□□□ -0.42
ITGB1-217ENST00000494395 TESK2Q96S53 571 aa12.44□□□□□ -0.42
ITGB1-217ENST00000494395 CABP2Q9NPB3 220 aa12.44□□□□□ -0.42
ITGB1-217ENST00000494395 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.44□□□□□ -0.42
ITGB1-217ENST00000494395 PPIP5K1Q6PFW1 1433 aa12.44□□□□□ -0.42
ITGB1-217ENST00000494395 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
ITGB1-217ENST00000494395 SRPK2P78362 688 aaKnown RBP12.43□□□□□ -0.42
ITGB1-217ENST00000494395 PSME1Q06323 249 aa12.42□□□□□ -0.42
ITGB1-217ENST00000494395 ILDR2Q71H61 639 aa12.42□□□□□ -0.42
ITGB1-217ENST00000494395 FAM212AQ96EL1 285 aa12.42□□□□□ -0.42
ITGB1-217ENST00000494395 USP47Q96K76 1375 aa12.42□□□□□ -0.42
ITGB1-217ENST00000494395 ACEP12821 1306 aa12.41□□□□□ -0.42
ITGB1-217ENST00000494395 NUTM2BA6NNL0 878 aaPredicted RBP12.41□□□□□ -0.42
ITGB1-217ENST00000494395 NUTM2EB1AL46 878 aaPredicted RBP12.41□□□□□ -0.42
ITGB1-217ENST00000494395 NRKQ7Z2Y5 1582 aa12.41□□□□□ -0.42
ITGB1-217ENST00000494395 NUTM2AQ8IVF1 878 aaPredicted RBP12.41□□□□□ -0.42
ITGB1-217ENST00000494395 ARHGEF10O15013 1369 aa12.41□□□□□ -0.42
ITGB1-217ENST00000494395 ATAD2Q6PL18 1390 aa12.41□□□□□ -0.42
ITGB1-217ENST00000494395 ST20-MTHFSA0A0A6YYL1 179 aa12.4□□□□□ -0.42
ITGB1-217ENST00000494395 NGDNQ8NEJ9 315 aaKnown RBP12.4□□□□□ -0.42
ITGB1-217ENST00000494395 PHRF1Q9P1Y6 1649 aaKnown RBP12.4□□□□□ -0.42
ITGB1-217ENST00000494395 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.43
ITGB1-217ENST00000494395 USP6P35125 1406 aa12.39□□□□□ -0.43
ITGB1-217ENST00000494395 CPSF1Q10570 1443 aaKnown RBP12.39□□□□□ -0.43
ITGB1-217ENST00000494395 SSH2Q76I76 1423 aa12.39□□□□□ -0.43
ITGB1-217ENST00000494395 RASEFQ8IZ41 740 aa12.39□□□□□ -0.43
ITGB1-217ENST00000494395 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
ITGB1-217ENST00000494395 CD163L1Q9NR16 1453 aa12.39□□□□□ -0.43
ITGB1-217ENST00000494395 POTEAQ6S8J7 498 aa12.38□□□□□ -0.43
ITGB1-217ENST00000494395 PUS7Q96PZ0 661 aaKnown RBP12.38□□□□□ -0.43
ITGB1-217ENST00000494395 CABP1Q9NZU7 370 aa12.38□□□□□ -0.43
ITGB1-217ENST00000494395 BRD4O60885 1362 aaPredicted RBP12.38□□□□□ -0.43
ITGB1-217ENST00000494395 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.37□□□□□ -0.43
ITGB1-217ENST00000494395 MEX3CQ5U5Q3 659 aaKnown RBP12.37□□□□□ -0.43
ITGB1-217ENST00000494395 PIK3C2AO00443 1686 aa12.37□□□□□ -0.43
ITGB1-217ENST00000494395 AFF2P51816 1311 aa12.37□□□□□ -0.43
ITGB1-217ENST00000494395 PLCH1Q4KWH8 1693 aa12.36□□□□□ -0.43
ITGB1-217ENST00000494395 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
ITGB1-217ENST00000494395 MYOM1P52179 1685 aa12.35□□□□□ -0.43
ITGB1-217ENST00000494395 USP54Q70EL1 1684 aa12.35□□□□□ -0.43
ITGB1-217ENST00000494395 NWD2Q9ULI1 1742 aa12.35□□□□□ -0.43
ITGB1-217ENST00000494395 ADAMTS2O95450 1211 aa12.35□□□□□ -0.43
ITGB1-217ENST00000494395 CHADLQ6NUI6 762 aa12.35□□□□□ -0.43
ITGB1-217ENST00000494395 FNBP4Q8N3X1 1017 aaPredicted RBP12.35□□□□□ -0.43
ITGB1-217ENST00000494395 CABLES1Q8TDN4 633 aa12.35□□□□□ -0.43
ITGB1-217ENST00000494395 C8orf37Q96NL8 207 aa12.35□□□□□ -0.43
ITGB1-217ENST00000494395 SLIT2O94813 1529 aa12.35□□□□□ -0.43
ITGB1-217ENST00000494395 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
ITGB1-217ENST00000494395 USP19O94966 1318 aa12.34□□□□□ -0.43
ITGB1-217ENST00000494395 NRAPQ86VF7 1730 aa12.34□□□□□ -0.43
ITGB1-217ENST00000494395 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
ITGB1-217ENST00000494395 SLIT3O75094 1523 aa12.33□□□□□ -0.44
ITGB1-217ENST00000494395 PAK3O75914 559 aaPredicted RBP12.33□□□□□ -0.44
ITGB1-217ENST00000494395 ZNF772Q68DY9 489 aaPredicted RBP12.33□□□□□ -0.44
ITGB1-217ENST00000494395 LMOD2Q6P5Q4 547 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms