RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 ARID3AQ99856 593 aa18.4■□□□□ 0.54
SMTN-219ENST00000493335 ZNF518AQ6AHZ1 1483 aa18.4■□□□□ 0.54
SMTN-219ENST00000493335 HMOX1P09601 288 aa18.39■□□□□ 0.54
SMTN-219ENST00000493335 TBC1D9Q6ZT07 1266 aa18.39■□□□□ 0.54
SMTN-219ENST00000493335 GAS2L2Q8NHY3 880 aa18.39■□□□□ 0.54
SMTN-219ENST00000493335 SPHKAPQ2M3C7 1700 aa18.39■□□□□ 0.54
SMTN-219ENST00000493335 MINK1Q8N4C8 1332 aaPredicted RBP18.39■□□□□ 0.53
SMTN-219ENST00000493335 KIF16BQ96L93 1317 aa18.39■□□□□ 0.53
SMTN-219ENST00000493335 RBM25P49756 843 aaKnown RBP18.39■□□□□ 0.53
SMTN-219ENST00000493335 ZBTB7CA1YPR0 619 aa18.39■□□□□ 0.53
SMTN-219ENST00000493335 K7ELQ4 463 aaPredicted RBP18.39■□□□□ 0.53
SMTN-219ENST00000493335 RBM10P98175 930 aaKnown RBP18.39■□□□□ 0.53
SMTN-219ENST00000493335 IQSEC2Q5JU85 1478 aa18.38■□□□□ 0.53
SMTN-219ENST00000493335 RAB3GAP1Q15042 981 aa18.38■□□□□ 0.53
SMTN-219ENST00000493335 FOXD4L5Q5VV16 416 aaPredicted RBP18.38■□□□□ 0.53
SMTN-219ENST00000493335 MCTP1Q6DN14 999 aa18.38■□□□□ 0.53
SMTN-219ENST00000493335 FOXD4L4Q8WXT5 416 aaPredicted RBP18.38■□□□□ 0.53
SMTN-219ENST00000493335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.38■□□□□ 0.53
SMTN-219ENST00000493335 C14orf93Q9H972 538 aaKnown RBP18.38■□□□□ 0.53
SMTN-219ENST00000493335 ZMYM3Q14202 1370 aa18.37■□□□□ 0.53
SMTN-219ENST00000493335 DIAPH1O60610 1272 aaKnown RBP18.36■□□□□ 0.53
SMTN-219ENST00000493335 CT47B1P0C2W7 299 aaPredicted RBP18.36■□□□□ 0.53
SMTN-219ENST00000493335 SNX21Q969T3 373 aa18.36■□□□□ 0.53
SMTN-219ENST00000493335 MSNP26038 577 aaKnown RBP18.36■□□□□ 0.53
SMTN-219ENST00000493335 SKOR2Q2VWA4 1001 aaPredicted RBP18.36■□□□□ 0.53
SMTN-219ENST00000493335 CAVIN1Q6NZI2 390 aaKnown RBP18.36■□□□□ 0.53
SMTN-219ENST00000493335 ABCA6Q8N139 1617 aa18.35■□□□□ 0.53
SMTN-219ENST00000493335 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
SMTN-219ENST00000493335 KIAA1211Q6ZU35 1233 aa18.35■□□□□ 0.53
SMTN-219ENST00000493335 PLEKHF1Q96S99 279 aa18.35■□□□□ 0.53
SMTN-219ENST00000493335 BMP2KLQ5H9B9 411 aa18.35■□□□□ 0.53
SMTN-219ENST00000493335 KIF2CQ99661 725 aa18.34■□□□□ 0.53
SMTN-219ENST00000493335 CD109Q6YHK3 1445 aa18.34■□□□□ 0.53
SMTN-219ENST00000493335 ABCC1P33527 1531 aa18.34■□□□□ 0.53
SMTN-219ENST00000493335 TSPYL6Q8N831 410 aa18.34■□□□□ 0.53
SMTN-219ENST00000493335 CIZ1Q9ULV3 898 aaPredicted RBP18.33■□□□□ 0.53
SMTN-219ENST00000493335 CFAP65Q6ZU64 1925 aaKnown RBP18.33■□□□□ 0.52
SMTN-219ENST00000493335 TPRNQ4KMQ1 711 aa18.33■□□□□ 0.52
SMTN-219ENST00000493335 MAP3K4Q9Y6R4 1608 aa18.32■□□□□ 0.52
SMTN-219ENST00000493335 DDIT3P35638 169 aa18.32■□□□□ 0.52
SMTN-219ENST00000493335 BAG4O95429 457 aaKnown RBP18.32■□□□□ 0.52
SMTN-219ENST00000493335 CALD1Q05682 793 aaKnown RBP18.32■□□□□ 0.52
SMTN-219ENST00000493335 ATAD2Q6PL18 1390 aa18.31■□□□□ 0.52
SMTN-219ENST00000493335 CHAMP1Q96JM3 812 aa18.31■□□□□ 0.52
SMTN-219ENST00000493335 ISY1Q9ULR0 285 aaKnown RBP18.31■□□□□ 0.52
SMTN-219ENST00000493335 SBNO2Q9Y2G9 1366 aa18.31■□□□□ 0.52
SMTN-219ENST00000493335 FYB1O15117 783 aa18.31■□□□□ 0.52
SMTN-219ENST00000493335 ANKRD36BQ8N2N9 1353 aa18.31■□□□□ 0.52
SMTN-219ENST00000493335 SHPRHQ149N8 1683 aa18.31■□□□□ 0.52
SMTN-219ENST00000493335 PKP1Q13835 747 aa18.3■□□□□ 0.52
SMTN-219ENST00000493335 C16orf71Q8IYS4 520 aaPredicted RBP18.3■□□□□ 0.52
SMTN-219ENST00000493335 ZBTB7BO15156 539 aaPredicted RBP18.29■□□□□ 0.52
SMTN-219ENST00000493335 A0A1W2PP64 1363 aa18.29■□□□□ 0.52
SMTN-219ENST00000493335 ZFYVE16Q7Z3T8 1539 aa18.29■□□□□ 0.52
SMTN-219ENST00000493335 CCDC173Q0VFZ6 552 aa18.29■□□□□ 0.52
SMTN-219ENST00000493335 FANCAO15360 1455 aa18.28■□□□□ 0.52
SMTN-219ENST00000493335 ABCC11Q96J66 1382 aa18.28■□□□□ 0.52
SMTN-219ENST00000493335 CDC45O75419 566 aa18.28■□□□□ 0.52
SMTN-219ENST00000493335 FOXD4L6Q3SYB3 417 aaPredicted RBP18.28■□□□□ 0.52
SMTN-219ENST00000493335 FOXD4L3Q6VB84 417 aaPredicted RBP18.28■□□□□ 0.52
SMTN-219ENST00000493335 GCC1Q96CN9 775 aa18.28■□□□□ 0.52
SMTN-219ENST00000493335 R3HCC1Q9Y3T6 440 aaKnown RBP18.28■□□□□ 0.52
SMTN-219ENST00000493335 MYOM2P54296 1465 aa18.28■□□□□ 0.52
SMTN-219ENST00000493335 PHACTR3Q96KR7 559 aa18.28■□□□□ 0.52
SMTN-219ENST00000493335 TERF2IPQ9NYB0 399 aa18.28■□□□□ 0.52
SMTN-219ENST00000493335 PRDM4Q9UKN5 801 aa18.28■□□□□ 0.52
SMTN-219ENST00000493335 PRPF40AO75400 957 aaKnown RBP18.27■□□□□ 0.52
SMTN-219ENST00000493335 FAM13BQ9NYF5 915 aa18.27■□□□□ 0.52
SMTN-219ENST00000493335 RBM27Q9P2N5 1060 aaKnown RBP18.27■□□□□ 0.52
SMTN-219ENST00000493335 NOL8Q76FK4 1167 aaKnown RBP18.27■□□□□ 0.52
SMTN-219ENST00000493335 SIRT2Q8IXJ6 389 aa18.27■□□□□ 0.52
SMTN-219ENST00000493335 ZSCAN30Q86W11 494 aa18.26■□□□□ 0.51
SMTN-219ENST00000493335 PRAM1Q96QH2 718 aa18.26■□□□□ 0.51
SMTN-219ENST00000493335 PPIP5K1Q6PFW1 1433 aa18.26■□□□□ 0.51
SMTN-219ENST00000493335 VGFO15240 615 aaPredicted RBP18.26■□□□□ 0.51
SMTN-219ENST00000493335 FGD1P98174 961 aa18.26■□□□□ 0.51
SMTN-219ENST00000493335 DCTN1Q14203 1278 aa18.26■□□□□ 0.51
SMTN-219ENST00000493335 CABP1Q9NZU7 370 aa18.26■□□□□ 0.51
SMTN-219ENST00000493335 ADGRL1O94910 1474 aa18.25■□□□□ 0.51
SMTN-219ENST00000493335 ATP7AQ04656 1500 aa18.25■□□□□ 0.51
SMTN-219ENST00000493335 GSPT1P15170 499 aaKnown RBP18.25■□□□□ 0.51
SMTN-219ENST00000493335 PTMSP20962 102 aa18.25■□□□□ 0.51
SMTN-219ENST00000493335 XPCQ01831 940 aaPredicted RBP18.25■□□□□ 0.51
SMTN-219ENST00000493335 KLHL40Q2TBA0 621 aa18.25■□□□□ 0.51
SMTN-219ENST00000493335 ALDH1L2Q3SY69 923 aa18.25■□□□□ 0.51
SMTN-219ENST00000493335 RNF214Q8ND24 703 aa18.25■□□□□ 0.51
SMTN-219ENST00000493335 OTUD7AQ8TE49 926 aaPredicted RBP18.25■□□□□ 0.51
SMTN-219ENST00000493335 NCOA3Q9Y6Q9 1424 aa18.24■□□□□ 0.51
SMTN-219ENST00000493335 SMARCA5O60264 1052 aaPredicted RBP18.24■□□□□ 0.51
SMTN-219ENST00000493335 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
SMTN-219ENST00000493335 ZGPATQ8N5A5 531 aaKnown RBP18.24■□□□□ 0.51
SMTN-219ENST00000493335 TET3O43151 1660 aa18.24■□□□□ 0.51
SMTN-219ENST00000493335 VAMP4O75379 141 aa18.24■□□□□ 0.51
SMTN-219ENST00000493335 TWISTNBQ3B726 338 aaPredicted RBP18.23■□□□□ 0.51
SMTN-219ENST00000493335 MPNDQ8N594 471 aa18.23■□□□□ 0.51
SMTN-219ENST00000493335 FAM83GA6ND36 823 aa18.23■□□□□ 0.51
SMTN-219ENST00000493335 ZSCAN23Q3MJ62 389 aa18.22■□□□□ 0.51
SMTN-219ENST00000493335 MRPL50Q8N5N7 158 aaKnown RBP18.22■□□□□ 0.51
SMTN-219ENST00000493335 IL16Q14005 1332 aa18.22■□□□□ 0.51
SMTN-219ENST00000493335 TPM2P07951 284 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms