RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CDC42BPGQ6DT37 1551 aa18.59■□□□□ 0.57
PTPN7-216ENST00000492977 PELP1Q8IZL8 1130 aaKnown RBP18.59■□□□□ 0.57
PTPN7-216ENST00000492977 ZNF692Q9BU19 519 aaPredicted RBP18.59■□□□□ 0.57
PTPN7-216ENST00000492977 ZNF521Q96K83 1311 aa18.57■□□□□ 0.56
PTPN7-216ENST00000492977 XRN1Q8IZH2 1706 aaKnown RBP18.57■□□□□ 0.56
PTPN7-216ENST00000492977 AKAP12Q02952 1782 aa18.56■□□□□ 0.56
PTPN7-216ENST00000492977 PRR36Q9H6K5 1346 aa18.56■□□□□ 0.56
PTPN7-216ENST00000492977 CCDC146Q8IYE0 955 aa18.55■□□□□ 0.56
PTPN7-216ENST00000492977 CDCA7LQ96GN5 454 aa18.55■□□□□ 0.56
PTPN7-216ENST00000492977 MON2Q7Z3U7 1717 aa18.55■□□□□ 0.56
PTPN7-216ENST00000492977 APAF1O14727 1248 aa18.55■□□□□ 0.56
PTPN7-216ENST00000492977 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.55■□□□□ 0.56
PTPN7-216ENST00000492977 PLEKHG3A1L390 1219 aa18.54■□□□□ 0.56
PTPN7-216ENST00000492977 IRX6P78412 446 aaPredicted RBP18.54■□□□□ 0.56
PTPN7-216ENST00000492977 ITSN1Q15811 1721 aa18.54■□□□□ 0.56
PTPN7-216ENST00000492977 TOPAZ1Q8N9V7 1692 aa18.54■□□□□ 0.56
PTPN7-216ENST00000492977 GOLGA2Q08379 1002 aa18.53■□□□□ 0.56
PTPN7-216ENST00000492977 RUNDC1Q96C34 613 aa18.53■□□□□ 0.56
PTPN7-216ENST00000492977 RCAN3Q9UKA8 241 aa18.52■□□□□ 0.56
PTPN7-216ENST00000492977 NCKAP5LQ9HCH0 1330 aa18.52■□□□□ 0.55
PTPN7-216ENST00000492977 PNPLA6Q8IY17 1366 aa18.51■□□□□ 0.55
PTPN7-216ENST00000492977 PPP4R2Q9NY27 417 aa18.51■□□□□ 0.55
PTPN7-216ENST00000492977 KCNA6P17658 529 aa18.5■□□□□ 0.55
PTPN7-216ENST00000492977 COL3A1P02461 1466 aaPredicted RBP18.49■□□□□ 0.55
PTPN7-216ENST00000492977 CHD2O14647 1828 aaKnown RBP18.49■□□□□ 0.55
PTPN7-216ENST00000492977 AATKQ6ZMQ8 1374 aa18.47■□□□□ 0.55
PTPN7-216ENST00000492977 U2AF1L5P0DN76 240 aaPredicted RBP18.47■□□□□ 0.55
PTPN7-216ENST00000492977 U2AF1Q01081 240 aaKnown RBP eCLIP18.47■□□□□ 0.55
PTPN7-216ENST00000492977 SLFN5Q08AF3 891 aa18.47■□□□□ 0.55
PTPN7-216ENST00000492977 DUSP27Q5VZP5 1158 aa18.47■□□□□ 0.55
PTPN7-216ENST00000492977 NME9Q86XW9 330 aa18.47■□□□□ 0.55
PTPN7-216ENST00000492977 TRMT2AQ8IZ69 625 aaKnown RBP18.47■□□□□ 0.55
PTPN7-216ENST00000492977 ACEP12821 1306 aa18.47■□□□□ 0.55
PTPN7-216ENST00000492977 COG3Q96JB2 828 aa18.47■□□□□ 0.55
PTPN7-216ENST00000492977 ATF5Q9Y2D1 282 aaPredicted RBP18.47■□□□□ 0.55
PTPN7-216ENST00000492977 IQSEC2Q5JU85 1478 aa18.46■□□□□ 0.55
PTPN7-216ENST00000492977 DIAPH1O60610 1272 aaKnown RBP18.46■□□□□ 0.55
PTPN7-216ENST00000492977 POLKQ9UBT6 870 aa18.46■□□□□ 0.55
PTPN7-216ENST00000492977 ANKARQ7Z5J8 1434 aa18.46■□□□□ 0.54
PTPN7-216ENST00000492977 E9PSI1 815 aa18.45■□□□□ 0.54
PTPN7-216ENST00000492977 RRP1P56182 461 aaKnown RBP18.45■□□□□ 0.54
PTPN7-216ENST00000492977 TCP11L2Q8N4U5 519 aa18.45■□□□□ 0.54
PTPN7-216ENST00000492977 MAP2P11137 1827 aaKnown RBP18.45■□□□□ 0.54
PTPN7-216ENST00000492977 TTC21BQ7Z4L5 1316 aa18.45■□□□□ 0.54
PTPN7-216ENST00000492977 NPHP4O75161 1426 aaPredicted RBP18.44■□□□□ 0.54
PTPN7-216ENST00000492977 USP6P35125 1406 aa18.44■□□□□ 0.54
PTPN7-216ENST00000492977 CCDC27Q2M243 656 aa18.44■□□□□ 0.54
PTPN7-216ENST00000492977 NRKQ7Z2Y5 1582 aa18.44■□□□□ 0.54
PTPN7-216ENST00000492977 WWC1Q8IX03 1113 aa18.44■□□□□ 0.54
PTPN7-216ENST00000492977 PNNQ9H307 717 aaKnown RBP18.44■□□□□ 0.54
PTPN7-216ENST00000492977 NKTRP30414 1462 aaKnown RBP18.44■□□□□ 0.54
PTPN7-216ENST00000492977 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
PTPN7-216ENST00000492977 U2SURPO15042 1029 aaKnown RBP18.42■□□□□ 0.54
PTPN7-216ENST00000492977 SSH2Q76I76 1423 aa18.41■□□□□ 0.54
PTPN7-216ENST00000492977 WDR63Q8IWG1 891 aa18.41■□□□□ 0.54
PTPN7-216ENST00000492977 ZRANB1Q9UGI0 708 aa18.41■□□□□ 0.54
PTPN7-216ENST00000492977 TTC21AQ8NDW8 1320 aa18.41■□□□□ 0.54
PTPN7-216ENST00000492977 FMN2Q9NZ56 1722 aa18.41■□□□□ 0.54
PTPN7-216ENST00000492977 CDK12Q9NYV4 1490 aaPredicted RBP18.4■□□□□ 0.54
PTPN7-216ENST00000492977 PLEKHF1Q96S99 279 aa18.4■□□□□ 0.54
PTPN7-216ENST00000492977 RGPD8O14715 1765 aaPredicted RBP18.39■□□□□ 0.53
PTPN7-216ENST00000492977 FCHSD2O94868 740 aa18.38■□□□□ 0.53
PTPN7-216ENST00000492977 PPM1GO15355 546 aaPredicted RBP18.38■□□□□ 0.53
PTPN7-216ENST00000492977 FBLN1P23142 703 aa18.38■□□□□ 0.53
PTPN7-216ENST00000492977 NGDNQ8NEJ9 315 aaKnown RBP18.38■□□□□ 0.53
PTPN7-216ENST00000492977 SPINK5Q9NQ38 1064 aaPredicted RBP18.38■□□□□ 0.53
PTPN7-216ENST00000492977 OVOS2A0A0J9YW53 1432 aa18.38■□□□□ 0.53
PTPN7-216ENST00000492977 OVOS2Q6IE36 1432 aa18.38■□□□□ 0.53
PTPN7-216ENST00000492977 NEUROD2Q15784 382 aa18.37■□□□□ 0.53
PTPN7-216ENST00000492977 PMFBP1Q8TBY8 1022 aa18.37■□□□□ 0.53
PTPN7-216ENST00000492977 RRP7AQ9Y3A4 280 aaKnown RBP18.37■□□□□ 0.53
PTPN7-216ENST00000492977 EMILIN1Q9Y6C2 1016 aa18.37■□□□□ 0.53
PTPN7-216ENST00000492977 MAPK8IP3Q9UPT6 1336 aa18.36■□□□□ 0.53
PTPN7-216ENST00000492977 USP31Q70CQ4 1352 aa18.35■□□□□ 0.53
PTPN7-216ENST00000492977 NALCNQ8IZF0 1738 aa18.35■□□□□ 0.53
PTPN7-216ENST00000492977 IL13P35225 146 aa18.34■□□□□ 0.53
PTPN7-216ENST00000492977 ADGRL3Q9HAR2 1447 aa18.34■□□□□ 0.53
PTPN7-216ENST00000492977 TMPOP42166 694 aaKnown RBP18.34■□□□□ 0.53
PTPN7-216ENST00000492977 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
PTPN7-216ENST00000492977 NWD1Q149M9 1564 aa18.33■□□□□ 0.52
PTPN7-216ENST00000492977 RRS1Q15050 365 aaKnown RBP18.33■□□□□ 0.52
PTPN7-216ENST00000492977 SAMD1Q6SPF0 538 aaPredicted RBP18.33■□□□□ 0.52
PTPN7-216ENST00000492977 NEFMP07197 916 aa18.31■□□□□ 0.52
PTPN7-216ENST00000492977 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
PTPN7-216ENST00000492977 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.31■□□□□ 0.52
PTPN7-216ENST00000492977 RSPH6AQ9H0K4 717 aa18.31■□□□□ 0.52
PTPN7-216ENST00000492977 MYH16Q9H6N6 1097 aa18.3■□□□□ 0.52
PTPN7-216ENST00000492977 LRRC7Q96NW7 1537 aa18.29■□□□□ 0.52
PTPN7-216ENST00000492977 PHF8Q9UPP1 1060 aa18.29■□□□□ 0.52
PTPN7-216ENST00000492977 IL16Q14005 1332 aa18.28■□□□□ 0.52
PTPN7-216ENST00000492977 PLIN1O60240 522 aa18.28■□□□□ 0.52
PTPN7-216ENST00000492977 PRKAR2BP31323 418 aa18.28■□□□□ 0.52
PTPN7-216ENST00000492977 CCDC136Q96JN2 1154 aa18.28■□□□□ 0.52
PTPN7-216ENST00000492977 TRIM35Q9UPQ4 493 aa18.28■□□□□ 0.52
PTPN7-216ENST00000492977 RIPK4P57078 832 aa18.27■□□□□ 0.52
PTPN7-216ENST00000492977 EXOC6Q8TAG9 804 aa18.27■□□□□ 0.52
PTPN7-216ENST00000492977 PIK3C2AO00443 1686 aa18.26■□□□□ 0.51
PTPN7-216ENST00000492977 USP54Q70EL1 1684 aa18.26■□□□□ 0.51
PTPN7-216ENST00000492977 C14orf37Q86TY3 774 aa18.25■□□□□ 0.51
PTPN7-216ENST00000492977 PROSER2Q86WR7 435 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms