RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 PLEKHG3A1L390 1219 aa12.12□□□□□ -0.47
SMARCC1-208ENST00000492896 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
SMARCC1-208ENST00000492896 USP54Q70EL1 1684 aa12.11□□□□□ -0.47
SMARCC1-208ENST00000492896 CCDC146Q8IYE0 955 aa12.11□□□□□ -0.47
SMARCC1-208ENST00000492896 ADGRL3Q9HAR2 1447 aa12.11□□□□□ -0.47
SMARCC1-208ENST00000492896 CDK12Q9NYV4 1490 aaPredicted RBP12.1□□□□□ -0.47
SMARCC1-208ENST00000492896 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
SMARCC1-208ENST00000492896 ACEP12821 1306 aa12.1□□□□□ -0.47
SMARCC1-208ENST00000492896 PIK3C2AO00443 1686 aa12.1□□□□□ -0.47
SMARCC1-208ENST00000492896 AATKQ6ZMQ8 1374 aa12.09□□□□□ -0.47
SMARCC1-208ENST00000492896 NUTM2FA1L443 756 aa12.09□□□□□ -0.47
SMARCC1-208ENST00000492896 NME9Q86XW9 330 aa12.09□□□□□ -0.47
SMARCC1-208ENST00000492896 OVOS2A0A0J9YW53 1432 aa12.09□□□□□ -0.47
SMARCC1-208ENST00000492896 OVOS2Q6IE36 1432 aa12.09□□□□□ -0.47
SMARCC1-208ENST00000492896 ZNF521Q96K83 1311 aa12.09□□□□□ -0.47
SMARCC1-208ENST00000492896 PNPLA6Q8IY17 1366 aa12.08□□□□□ -0.48
SMARCC1-208ENST00000492896 LRRC7Q96NW7 1537 aa12.08□□□□□ -0.48
SMARCC1-208ENST00000492896 RUNDC1Q96C34 613 aa12.08□□□□□ -0.48
SMARCC1-208ENST00000492896 COG3Q96JB2 828 aa12.08□□□□□ -0.48
SMARCC1-208ENST00000492896 SSH2Q76I76 1423 aa12.08□□□□□ -0.48
SMARCC1-208ENST00000492896 MARF1Q9Y4F3 1742 aaKnown RBP12.08□□□□□ -0.48
SMARCC1-208ENST00000492896 TTC21BQ7Z4L5 1316 aa12.08□□□□□ -0.48
SMARCC1-208ENST00000492896 APAF1O14727 1248 aa12.07□□□□□ -0.48
SMARCC1-208ENST00000492896 ERICH6BQ5W0A0 696 aa12.07□□□□□ -0.48
SMARCC1-208ENST00000492896 RNF123Q5XPI4 1314 aa12.07□□□□□ -0.48
SMARCC1-208ENST00000492896 TTC21AQ8NDW8 1320 aa12.07□□□□□ -0.48
SMARCC1-208ENST00000492896 CDCA7LQ96GN5 454 aa12.06□□□□□ -0.48
SMARCC1-208ENST00000492896 STRCP1A6NGW2 1772 aa12.05□□□□□ -0.48
SMARCC1-208ENST00000492896 DIAPH1O60610 1272 aaKnown RBP12.05□□□□□ -0.48
SMARCC1-208ENST00000492896 U2AF1L5P0DN76 240 aaPredicted RBP12.05□□□□□ -0.48
SMARCC1-208ENST00000492896 IRX6P78412 446 aaPredicted RBP12.05□□□□□ -0.48
SMARCC1-208ENST00000492896 U2AF1Q01081 240 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMARCC1-208ENST00000492896 GOLGA2Q08379 1002 aa12.05□□□□□ -0.48
SMARCC1-208ENST00000492896 ZRANB1Q9UGI0 708 aa12.05□□□□□ -0.48
SMARCC1-208ENST00000492896 KIF1AQ12756 1690 aa12.05□□□□□ -0.48
SMARCC1-208ENST00000492896 PEAK1Q9H792 1746 aa12.04□□□□□ -0.48
SMARCC1-208ENST00000492896 NGDNQ8NEJ9 315 aaKnown RBP12.04□□□□□ -0.48
SMARCC1-208ENST00000492896 PMFBP1Q8TBY8 1022 aa12.04□□□□□ -0.48
SMARCC1-208ENST00000492896 POLKQ9UBT6 870 aa12.04□□□□□ -0.48
SMARCC1-208ENST00000492896 RCAN3Q9UKA8 241 aa12.04□□□□□ -0.48
SMARCC1-208ENST00000492896 U2SURPO15042 1029 aaKnown RBP12.03□□□□□ -0.48
SMARCC1-208ENST00000492896 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
SMARCC1-208ENST00000492896 USP31Q70CQ4 1352 aa12.03□□□□□ -0.48
SMARCC1-208ENST00000492896 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
SMARCC1-208ENST00000492896 STRCQ7RTU9 1775 aa12.02□□□□□ -0.49
SMARCC1-208ENST00000492896 RGPD1P0DJD0 1748 aa12.01□□□□□ -0.49
SMARCC1-208ENST00000492896 E9PSI1 815 aa12.01□□□□□ -0.49
SMARCC1-208ENST00000492896 PPM1GO15355 546 aaPredicted RBP12.01□□□□□ -0.49
SMARCC1-208ENST00000492896 RRP1P56182 461 aaKnown RBP12.01□□□□□ -0.49
SMARCC1-208ENST00000492896 SLFN5Q08AF3 891 aa12.01□□□□□ -0.49
SMARCC1-208ENST00000492896 DUSP27Q5VZP5 1158 aa12.01□□□□□ -0.49
SMARCC1-208ENST00000492896 C14orf37Q86TY3 774 aa12.01□□□□□ -0.49
SMARCC1-208ENST00000492896 TCP11L2Q8N4U5 519 aa12.01□□□□□ -0.49
SMARCC1-208ENST00000492896 PNNQ9H307 717 aaKnown RBP12.01□□□□□ -0.49
SMARCC1-208ENST00000492896 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
SMARCC1-208ENST00000492896 MAPK8IP3Q9UPT6 1336 aa12.01□□□□□ -0.49
SMARCC1-208ENST00000492896 LMTK3Q96Q04 1460 aa12.01□□□□□ -0.49
SMARCC1-208ENST00000492896 LTN1O94822 1766 aa12□□□□□ -0.49
SMARCC1-208ENST00000492896 DLG5Q8TDM6 1919 aa12□□□□□ -0.49
SMARCC1-208ENST00000492896 CCDC27Q2M243 656 aa12□□□□□ -0.49
SMARCC1-208ENST00000492896 FBLN1P23142 703 aa11.99□□□□□ -0.49
SMARCC1-208ENST00000492896 RRS1Q15050 365 aaKnown RBP11.99□□□□□ -0.49
SMARCC1-208ENST00000492896 WWC1Q8IX03 1113 aa11.99□□□□□ -0.49
SMARCC1-208ENST00000492896 TRMT2AQ8IZ69 625 aaKnown RBP11.99□□□□□ -0.49
SMARCC1-208ENST00000492896 PLEKHF1Q96S99 279 aa11.99□□□□□ -0.49
SMARCC1-208ENST00000492896 PHF8Q9UPP1 1060 aa11.99□□□□□ -0.49
SMARCC1-208ENST00000492896 TRPM3Q9HCF6 1732 aaPredicted RBP11.99□□□□□ -0.49
SMARCC1-208ENST00000492896 XIRP1Q702N8 1843 aaKnown RBP11.99□□□□□ -0.49
SMARCC1-208ENST00000492896 PROSER2Q86WR7 435 aaPredicted RBP11.98□□□□□ -0.49
SMARCC1-208ENST00000492896 RBM33Q96EV2 1170 aaKnown RBP11.98□□□□□ -0.49
SMARCC1-208ENST00000492896 PHF23Q9BUL5 403 aaPredicted RBP11.98□□□□□ -0.49
SMARCC1-208ENST00000492896 PPP4R2Q9NY27 417 aa11.98□□□□□ -0.49
SMARCC1-208ENST00000492896 RRP7AQ9Y3A4 280 aaKnown RBP11.98□□□□□ -0.49
SMARCC1-208ENST00000492896 DCCP43146 1447 aa11.97□□□□□ -0.49
SMARCC1-208ENST00000492896 NCOA3Q9Y6Q9 1424 aa11.97□□□□□ -0.49
SMARCC1-208ENST00000492896 KDM4FA0A1W2PPD8 638 aa11.97□□□□□ -0.49
SMARCC1-208ENST00000492896 IL13P35225 146 aa11.97□□□□□ -0.49
SMARCC1-208ENST00000492896 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
SMARCC1-208ENST00000492896 WDR63Q8IWG1 891 aa11.97□□□□□ -0.49
SMARCC1-208ENST00000492896 SBNO1A3KN83 1393 aa11.96□□□□□ -0.49
SMARCC1-208ENST00000492896 FCHSD2O94868 740 aa11.96□□□□□ -0.49
SMARCC1-208ENST00000492896 NEFMP07197 916 aa11.96□□□□□ -0.49
SMARCC1-208ENST00000492896 TMPOP42166 694 aaKnown RBP11.96□□□□□ -0.49
SMARCC1-208ENST00000492896 RSPH6AQ9H0K4 717 aa11.96□□□□□ -0.49
SMARCC1-208ENST00000492896 FLT4P35916 1363 aa11.95□□□□□ -0.5
SMARCC1-208ENST00000492896 HSPA2P54652 639 aa11.95□□□□□ -0.5
SMARCC1-208ENST00000492896 SPINK5Q9NQ38 1064 aaPredicted RBP11.95□□□□□ -0.5
SMARCC1-208ENST00000492896 DMRT2Q9Y5R5 561 aa11.95□□□□□ -0.5
SMARCC1-208ENST00000492896 PHRF1Q9P1Y6 1649 aaKnown RBP11.95□□□□□ -0.5
SMARCC1-208ENST00000492896 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
SMARCC1-208ENST00000492896 KIF24Q5T7B8 1368 aa11.94□□□□□ -0.5
SMARCC1-208ENST00000492896 PRKAR2BP31323 418 aa11.94□□□□□ -0.5
SMARCC1-208ENST00000492896 ESCO1Q5FWF5 840 aa11.94□□□□□ -0.5
SMARCC1-208ENST00000492896 NFAT5O94916 1531 aa11.94□□□□□ -0.5
SMARCC1-208ENST00000492896 ALS2Q96Q42 1657 aa11.94□□□□□ -0.5
SMARCC1-208ENST00000492896 TMEM94Q12767 1356 aa11.93□□□□□ -0.5
SMARCC1-208ENST00000492896 MAP3K19Q56UN5 1328 aa11.93□□□□□ -0.5
SMARCC1-208ENST00000492896 NLRP6P59044 892 aa11.93□□□□□ -0.5
SMARCC1-208ENST00000492896 EIF4A2Q14240 407 aaKnown RBP11.93□□□□□ -0.5
SMARCC1-208ENST00000492896 C19orf44Q9H6X5 657 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms