RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 UGGT1Q9NYU2 1555 aa9.21□□□□□ -0.94
NPHP3-208ENST00000490993 NLRP6P59044 892 aa9.21□□□□□ -0.94
NPHP3-208ENST00000490993 GOLGA6L22H0YM25 854 aa9.2□□□□□ -0.94
NPHP3-208ENST00000490993 SLC26A8Q96RN1 970 aa9.2□□□□□ -0.94
NPHP3-208ENST00000490993 FYB1O15117 783 aa9.2□□□□□ -0.94
NPHP3-208ENST00000490993 CEP152O94986 1710 aa9.2□□□□□ -0.94
NPHP3-208ENST00000490993 ANP32BQ92688 251 aaKnown RBP9.19□□□□□ -0.94
NPHP3-208ENST00000490993 SIRT1Q96EB6 747 aa9.19□□□□□ -0.94
NPHP3-208ENST00000490993 LTV1Q96GA3 475 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-208ENST00000490993 ELL2O00472 640 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-208ENST00000490993 RARSP54136 660 aaKnown RBP9.19□□□□□ -0.94
NPHP3-208ENST00000490993 A0A1W2PP64 1363 aa9.19□□□□□ -0.94
NPHP3-208ENST00000490993 NEURL4Q96JN8 1562 aa9.19□□□□□ -0.94
NPHP3-208ENST00000490993 MVPQ14764 893 aaKnown RBP9.19□□□□□ -0.94
NPHP3-208ENST00000490993 ALDH1L2Q3SY69 923 aa9.19□□□□□ -0.94
NPHP3-208ENST00000490993 ADGRB3O60242 1522 aa9.19□□□□□ -0.94
NPHP3-208ENST00000490993 HSP90AB1P08238 724 aaKnown RBP9.19□□□□□ -0.94
NPHP3-208ENST00000490993 CSB-PGBD3P0DP91 1061 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 MCCP23508 829 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 OS9Q13438 667 aaPredicted RBP9.18□□□□□ -0.94
NPHP3-208ENST00000490993 C1orf141Q5JVX7 400 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 ATF7IPQ6VMQ6 1270 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 AMOTL2Q9Y2J4 779 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 SETBP1Q9Y6X0 1596 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 PPIP5K1Q6PFW1 1433 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 TSR2Q969E8 191 aaKnown RBP9.18□□□□□ -0.94
NPHP3-208ENST00000490993 IFT57Q9NWB7 429 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 ABTB2Q8N961 1025 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 TWISTNBQ3B726 338 aaPredicted RBP9.18□□□□□ -0.94
NPHP3-208ENST00000490993 USP35Q9P2H5 1018 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 NME9Q86XW9 330 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 BACH2Q9BYV9 841 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 TSPYL4Q9UJ04 414 aa9.18□□□□□ -0.94
NPHP3-208ENST00000490993 SULT6B1Q6IMI4 303 aa9.17□□□□□ -0.94
NPHP3-208ENST00000490993 PLEKHH1Q9ULM0 1364 aa9.17□□□□□ -0.94
NPHP3-208ENST00000490993 NOB1Q9ULX3 412 aaKnown RBP9.17□□□□□ -0.94
NPHP3-208ENST00000490993 TTC21BQ7Z4L5 1316 aa9.17□□□□□ -0.94
NPHP3-208ENST00000490993 TTC21AQ8NDW8 1320 aa9.17□□□□□ -0.94
NPHP3-208ENST00000490993 SLC4A10Q6U841 1118 aa9.17□□□□□ -0.94
NPHP3-208ENST00000490993 KIAA1210Q9ULL0 1709 aa9.16□□□□□ -0.94
NPHP3-208ENST00000490993 TEFQ10587 303 aa9.16□□□□□ -0.94
NPHP3-208ENST00000490993 ANKRD45Q5TZF3 282 aa9.16□□□□□ -0.94
NPHP3-208ENST00000490993 DEPDC5O75140 1603 aa9.16□□□□□ -0.94
NPHP3-208ENST00000490993 RRS1Q15050 365 aaKnown RBP9.16□□□□□ -0.94
NPHP3-208ENST00000490993 MFAP1P55081 439 aaKnown RBP9.16□□□□□ -0.94
NPHP3-208ENST00000490993 PPRC1Q5VV67 1664 aaKnown RBP9.16□□□□□ -0.94
NPHP3-208ENST00000490993 GCC1Q96CN9 775 aa9.15□□□□□ -0.94
NPHP3-208ENST00000490993 VWDEQ8N2E2 1590 aa9.15□□□□□ -0.94
NPHP3-208ENST00000490993 KIDINS220Q9ULH0 1771 aa9.15□□□□□ -0.94
NPHP3-208ENST00000490993 ATF3P18847 181 aa9.15□□□□□ -0.94
NPHP3-208ENST00000490993 PTMSP20962 102 aa9.15□□□□□ -0.94
NPHP3-208ENST00000490993 EDC4Q6P2E9 1401 aaKnown RBP9.15□□□□□ -0.94
NPHP3-208ENST00000490993 CAMSAP1Q5T5Y3 1602 aa9.15□□□□□ -0.95
NPHP3-208ENST00000490993 CEBPAP49715 358 aaPredicted RBP9.15□□□□□ -0.95
NPHP3-208ENST00000490993 ESCO1Q5FWF5 840 aa9.15□□□□□ -0.95
NPHP3-208ENST00000490993 C20orf194Q5TEA3 1177 aa9.15□□□□□ -0.95
NPHP3-208ENST00000490993 GLI2P10070 1586 aa9.14□□□□□ -0.95
NPHP3-208ENST00000490993 EMILIN1Q9Y6C2 1016 aa9.14□□□□□ -0.95
NPHP3-208ENST00000490993 ABCA6Q8N139 1617 aa9.14□□□□□ -0.95
NPHP3-208ENST00000490993 ZC3H13Q5T200 1668 aaKnown RBP9.14□□□□□ -0.95
NPHP3-208ENST00000490993 CCDC30Q5VVM6 783 aa9.14□□□□□ -0.95
NPHP3-208ENST00000490993 KCNH5Q8NCM2 988 aa9.14□□□□□ -0.95
NPHP3-208ENST00000490993 TBX22Q9Y458 520 aa9.14□□□□□ -0.95
NPHP3-208ENST00000490993 ACEP12821 1306 aa9.14□□□□□ -0.95
NPHP3-208ENST00000490993 DIP2CQ9Y2E4 1556 aa9.14□□□□□ -0.95
NPHP3-208ENST00000490993 PDZRN3Q9UPQ7 1066 aa9.14□□□□□ -0.95
NPHP3-208ENST00000490993 TMEM2Q9UHN6 1383 aa9.13□□□□□ -0.95
NPHP3-208ENST00000490993 PLEKHO1Q53GL0 409 aaPredicted RBP9.13□□□□□ -0.95
NPHP3-208ENST00000490993 PROSER2Q86WR7 435 aaPredicted RBP9.13□□□□□ -0.95
NPHP3-208ENST00000490993 GPATCH3Q96I76 525 aa9.13□□□□□ -0.95
NPHP3-208ENST00000490993 CFAP65Q6ZU64 1925 aaKnown RBP9.13□□□□□ -0.95
NPHP3-208ENST00000490993 APBB1O00213 710 aa9.12□□□□□ -0.95
NPHP3-208ENST00000490993 NCLP19338 710 aaKnown RBP9.12□□□□□ -0.95
NPHP3-208ENST00000490993 POLKQ9UBT6 870 aa9.12□□□□□ -0.95
NPHP3-208ENST00000490993 SSH1Q8WYL5 1049 aa9.12□□□□□ -0.95
NPHP3-208ENST00000490993 NRXN1Q9ULB1 1477 aa9.11□□□□□ -0.95
NPHP3-208ENST00000490993 NUTM2GQ5VZR2 741 aa9.11□□□□□ -0.95
NPHP3-208ENST00000490993 CCT4P50991 539 aaKnown RBP9.11□□□□□ -0.95
NPHP3-208ENST00000490993 FKBP5Q13451 457 aaPredicted RBP9.11□□□□□ -0.95
NPHP3-208ENST00000490993 IQGAP1P46940 1657 aa9.11□□□□□ -0.95
NPHP3-208ENST00000490993 ATP7BP35670 1465 aa9.11□□□□□ -0.95
NPHP3-208ENST00000490993 GNAI3P08754 354 aa9.11□□□□□ -0.95
NPHP3-208ENST00000490993 PHF8Q9UPP1 1060 aa9.11□□□□□ -0.95
NPHP3-208ENST00000490993 ARHGAP45Q92619 1136 aa9.1□□□□□ -0.95
NPHP3-208ENST00000490993 DDX58O95786 925 aaKnown RBP9.1□□□□□ -0.95
NPHP3-208ENST00000490993 KIAA1211Q6ZU35 1233 aa9.1□□□□□ -0.95
NPHP3-208ENST00000490993 RAPGEF4Q8WZA2 1011 aa9.1□□□□□ -0.95
NPHP3-208ENST00000490993 GBP4Q96PP9 640 aa9.1□□□□□ -0.95
NPHP3-208ENST00000490993 AGLP35573 1532 aa9.1□□□□□ -0.95
NPHP3-208ENST00000490993 NLRP1Q9C000 1473 aa9.09□□□□□ -0.95
NPHP3-208ENST00000490993 GNAT3A8MTJ3 354 aa9.09□□□□□ -0.95
NPHP3-208ENST00000490993 TMEM57Q8N5G2 664 aa9.09□□□□□ -0.95
NPHP3-208ENST00000490993 FAM135BQ49AJ0 1406 aa9.09□□□□□ -0.95
NPHP3-208ENST00000490993 DEKP35659 375 aaKnown RBP9.09□□□□□ -0.95
NPHP3-208ENST00000490993 HSP90AB4PQ58FF6 505 aa9.09□□□□□ -0.95
NPHP3-208ENST00000490993 PLEKHG1Q9ULL1 1385 aa9.09□□□□□ -0.95
NPHP3-208ENST00000490993 TSPOAP1O95153 1857 aa9.09□□□□□ -0.95
NPHP3-208ENST00000490993 LNPKQ9C0E8 428 aa9.09□□□□□ -0.95
NPHP3-208ENST00000490993 ZNF521Q96K83 1311 aa9.08□□□□□ -0.96
NPHP3-208ENST00000490993 REC8O95072 547 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms