RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 SRPK2P78362 688 aaKnown RBP12.72□□□□□ -0.37
BRD9-209ENST00000490814 ABCA6Q8N139 1617 aa12.72□□□□□ -0.37
BRD9-209ENST00000490814 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
BRD9-209ENST00000490814 ZKSCAN2Q63HK3 967 aa12.72□□□□□ -0.37
BRD9-209ENST00000490814 MAP7D2Q96T17 732 aa12.72□□□□□ -0.37
BRD9-209ENST00000490814 DIP2CQ9Y2E4 1556 aa12.72□□□□□ -0.37
BRD9-209ENST00000490814 DZIP1LQ8IYY4 767 aaKnown RBP12.71□□□□□ -0.37
BRD9-209ENST00000490814 NGEFQ8N5V2 710 aa12.71□□□□□ -0.37
BRD9-209ENST00000490814 THEMISQ8N1K5 641 aaPredicted RBP12.71□□□□□ -0.37
BRD9-209ENST00000490814 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.37
BRD9-209ENST00000490814 FRMPD1Q5SYB0 1578 aa12.71□□□□□ -0.37
BRD9-209ENST00000490814 UGGT1Q9NYU2 1555 aa12.71□□□□□ -0.38
BRD9-209ENST00000490814 EXOSC9Q06265 439 aaKnown RBP12.71□□□□□ -0.38
BRD9-209ENST00000490814 ANTXR1Q9H6X2 564 aa12.7□□□□□ -0.38
BRD9-209ENST00000490814 TNRQ92752 1358 aa12.7□□□□□ -0.38
BRD9-209ENST00000490814 ESPNB1AK53 854 aa12.7□□□□□ -0.38
BRD9-209ENST00000490814 ZFP91Q96JP5 570 aaPredicted RBP12.7□□□□□ -0.38
BRD9-209ENST00000490814 MRE11P49959 708 aa12.69□□□□□ -0.38
BRD9-209ENST00000490814 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
BRD9-209ENST00000490814 CHMP5Q9NZZ3 219 aa12.69□□□□□ -0.38
BRD9-209ENST00000490814 RICTORQ6R327 1708 aa12.69□□□□□ -0.38
BRD9-209ENST00000490814 SYNMO15061 1565 aa12.69□□□□□ -0.38
BRD9-209ENST00000490814 C22orf23Q9BZE7 217 aa12.69□□□□□ -0.38
BRD9-209ENST00000490814 NPC1L1Q9UHC9 1359 aa12.69□□□□□ -0.38
BRD9-209ENST00000490814 NOS1P29475 1434 aa12.68□□□□□ -0.38
BRD9-209ENST00000490814 NPATQ14207 1427 aa12.68□□□□□ -0.38
BRD9-209ENST00000490814 MVPQ14764 893 aaKnown RBP12.68□□□□□ -0.38
BRD9-209ENST00000490814 KIAA1211Q6ZU35 1233 aa12.68□□□□□ -0.38
BRD9-209ENST00000490814 TBC1D32Q96NH3 1257 aa12.68□□□□□ -0.38
BRD9-209ENST00000490814 PRDM10Q9NQV6 1147 aa12.68□□□□□ -0.38
BRD9-209ENST00000490814 SLC52A1Q9NWF4 448 aa12.68□□□□□ -0.38
BRD9-209ENST00000490814 ERVK-7P63135 1459 aa12.68□□□□□ -0.38
BRD9-209ENST00000490814 MADDQ8WXG6 1647 aa12.68□□□□□ -0.38
BRD9-209ENST00000490814 VGLL3A8MV65 326 aa12.68□□□□□ -0.38
BRD9-209ENST00000490814 LAMC1P11047 1609 aa12.68□□□□□ -0.38
BRD9-209ENST00000490814 WDR63Q8IWG1 891 aa12.68□□□□□ -0.38
BRD9-209ENST00000490814 GRPEL1Q9HAV7 217 aa12.68□□□□□ -0.38
BRD9-209ENST00000490814 ANKLE2Q86XL3 938 aa12.67□□□□□ -0.38
BRD9-209ENST00000490814 ZNF830Q96NB3 372 aaPredicted RBP12.67□□□□□ -0.38
BRD9-209ENST00000490814 POLR3AO14802 1390 aaPredicted RBP12.67□□□□□ -0.38
BRD9-209ENST00000490814 HSCBQ8IWL3 235 aa12.67□□□□□ -0.38
BRD9-209ENST00000490814 ANP32BQ92688 251 aaKnown RBP12.67□□□□□ -0.38
BRD9-209ENST00000490814 LNPKQ9C0E8 428 aa12.67□□□□□ -0.38
BRD9-209ENST00000490814 TMEM51Q9NW97 253 aa12.67□□□□□ -0.38
BRD9-209ENST00000490814 LTKP29376 864 aa12.67□□□□□ -0.38
BRD9-209ENST00000490814 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
BRD9-209ENST00000490814 FAM13BQ9NYF5 915 aa12.67□□□□□ -0.38
BRD9-209ENST00000490814 ELL2O00472 640 aaPredicted RBP12.66□□□□□ -0.38
BRD9-209ENST00000490814 PLXNC1O60486 1568 aa12.66□□□□□ -0.38
BRD9-209ENST00000490814 NINLQ9Y2I6 1382 aa12.66□□□□□ -0.38
BRD9-209ENST00000490814 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
BRD9-209ENST00000490814 UTP14CQ5TAP6 766 aaKnown RBP12.66□□□□□ -0.38
BRD9-209ENST00000490814 SSH1Q8WYL5 1049 aa12.65□□□□□ -0.38
BRD9-209ENST00000490814 PPP6R1Q9UPN7 881 aa12.65□□□□□ -0.38
BRD9-209ENST00000490814 FSD2A1L4K1 749 aa12.65□□□□□ -0.38
BRD9-209ENST00000490814 NOB1Q9ULX3 412 aaKnown RBP12.65□□□□□ -0.38
BRD9-209ENST00000490814 TRIM27P14373 513 aa12.65□□□□□ -0.38
BRD9-209ENST00000490814 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
BRD9-209ENST00000490814 MINK1Q8N4C8 1332 aaPredicted RBP12.65□□□□□ -0.38
BRD9-209ENST00000490814 CLTCL1P53675 1640 aa12.65□□□□□ -0.38
BRD9-209ENST00000490814 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
BRD9-209ENST00000490814 RIPK4P57078 832 aa12.64□□□□□ -0.39
BRD9-209ENST00000490814 ARID3AQ99856 593 aa12.64□□□□□ -0.39
BRD9-209ENST00000490814 DMTNQ08495 405 aa12.64□□□□□ -0.39
BRD9-209ENST00000490814 TRPM2O94759 1503 aa12.64□□□□□ -0.39
BRD9-209ENST00000490814 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
BRD9-209ENST00000490814 HSP90AB1P08238 724 aaKnown RBP12.64□□□□□ -0.39
BRD9-209ENST00000490814 ARHGEF40Q8TER5 1519 aa12.64□□□□□ -0.39
BRD9-209ENST00000490814 INO80Q9ULG1 1556 aaPredicted RBP12.64□□□□□ -0.39
BRD9-209ENST00000490814 KDM5AP29375 1690 aaKnown RBP12.63□□□□□ -0.39
BRD9-209ENST00000490814 RNF17Q9BXT8 1623 aaKnown RBP12.63□□□□□ -0.39
BRD9-209ENST00000490814 TMEM57Q8N5G2 664 aa12.63□□□□□ -0.39
BRD9-209ENST00000490814 C1orf115Q9H7X2 142 aa12.63□□□□□ -0.39
BRD9-209ENST00000490814 PTPRTO14522 1441 aa12.62□□□□□ -0.39
BRD9-209ENST00000490814 DDX11L8A8MPP1 907 aa12.62□□□□□ -0.39
BRD9-209ENST00000490814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.62□□□□□ -0.39
BRD9-209ENST00000490814 DDX19BQ9UMR2 479 aa12.62□□□□□ -0.39
BRD9-209ENST00000490814 PTPRMP28827 1452 aa12.62□□□□□ -0.39
BRD9-209ENST00000490814 FBLN1P23142 703 aa12.62□□□□□ -0.39
BRD9-209ENST00000490814 ERBB4Q15303 1308 aa12.61□□□□□ -0.39
BRD9-209ENST00000490814 TMPOP42166 694 aaKnown RBP12.61□□□□□ -0.39
BRD9-209ENST00000490814 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
BRD9-209ENST00000490814 TEX2Q8IWB9 1127 aa12.61□□□□□ -0.39
BRD9-209ENST00000490814 IQGAP1P46940 1657 aa12.61□□□□□ -0.39
BRD9-209ENST00000490814 ANKRD45Q5TZF3 282 aa12.61□□□□□ -0.39
BRD9-209ENST00000490814 C14orf93Q9H972 538 aaKnown RBP12.61□□□□□ -0.39
BRD9-209ENST00000490814 CDK11BP21127 795 aaKnown RBP12.6□□□□□ -0.39
BRD9-209ENST00000490814 SECISBP2LQ93073 1101 aaKnown RBP12.6□□□□□ -0.39
BRD9-209ENST00000490814 THUMPD2Q9BTF0 503 aaKnown RBP12.59□□□□□ -0.39
BRD9-209ENST00000490814 IPO8O15397 1037 aaKnown RBP12.59□□□□□ -0.39
BRD9-209ENST00000490814 HMOX1P09601 288 aa12.59□□□□□ -0.39
BRD9-209ENST00000490814 WAPLQ7Z5K2 1190 aa12.59□□□□□ -0.39
BRD9-209ENST00000490814 MTERF4Q7Z6M4 381 aaKnown RBP12.58□□□□□ -0.39
BRD9-209ENST00000490814 ABCC3O15438 1527 aa12.58□□□□□ -0.4
BRD9-209ENST00000490814 APBB1O00213 710 aa12.58□□□□□ -0.4
BRD9-209ENST00000490814 DIAPH1O60610 1272 aaKnown RBP12.57□□□□□ -0.4
BRD9-209ENST00000490814 GBP4Q96PP9 640 aa12.57□□□□□ -0.4
BRD9-209ENST00000490814 RIMS1Q86UR5 1692 aaKnown RBP12.57□□□□□ -0.4
BRD9-209ENST00000490814 CLTCQ00610 1675 aaKnown RBP12.57□□□□□ -0.4
BRD9-209ENST00000490814 GAS2L3Q86XJ1 694 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms