RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 ORAI2Q96SN7 254 aa14.98□□□□□ -0.01
VARS2-210ENST00000490699 AKAP12Q02952 1782 aa14.98□□□□□ -0.01
VARS2-210ENST00000490699 POLR3AO14802 1390 aaPredicted RBP14.98□□□□□ -0.01
VARS2-210ENST00000490699 PIP4K2BP78356 416 aa14.97□□□□□ -0.01
VARS2-210ENST00000490699 EDC4Q6P2E9 1401 aaKnown RBP14.97□□□□□ -0.01
VARS2-210ENST00000490699 CGNL1Q0VF96 1302 aa14.96□□□□□ -0.01
VARS2-210ENST00000490699 CPSF1Q10570 1443 aaKnown RBP14.96□□□□□ -0.01
VARS2-210ENST00000490699 BRINP3Q76B58 766 aa14.96□□□□□ -0.01
VARS2-210ENST00000490699 MON2Q7Z3U7 1717 aa14.96□□□□□ -0.01
VARS2-210ENST00000490699 NSD3Q9BZ95 1437 aa14.96□□□□□ -0.01
VARS2-210ENST00000490699 ROBO1Q9Y6N7 1651 aa14.96□□□□□ -0.01
VARS2-210ENST00000490699 USP6P35125 1406 aa14.95□□□□□ -0.02
VARS2-210ENST00000490699 FOXO3O43524 673 aa14.95□□□□□ -0.02
VARS2-210ENST00000490699 PAK3O75914 559 aaPredicted RBP14.95□□□□□ -0.02
VARS2-210ENST00000490699 TTC21AQ8NDW8 1320 aa14.94□□□□□ -0.02
VARS2-210ENST00000490699 ILDR1Q86SU0 546 aaPredicted RBP14.94□□□□□ -0.02
VARS2-210ENST00000490699 KRT28Q7Z3Y7 464 aa14.93□□□□□ -0.02
VARS2-210ENST00000490699 NSD2O96028 1365 aa14.93□□□□□ -0.02
VARS2-210ENST00000490699 CD163L1Q9NR16 1453 aa14.93□□□□□ -0.02
VARS2-210ENST00000490699 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.92□□□□□ -0.02
VARS2-210ENST00000490699 ANP32CO43423 234 aa14.91□□□□□ -0.02
VARS2-210ENST00000490699 DIEXFQ68CQ4 756 aaKnown RBP14.91□□□□□ -0.02
VARS2-210ENST00000490699 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
VARS2-210ENST00000490699 KIF20BQ96Q89 1820 aa14.91□□□□□ -0.02
VARS2-210ENST00000490699 NHSL1Q5SYE7 1610 aa14.91□□□□□ -0.02
VARS2-210ENST00000490699 TTC21BQ7Z4L5 1316 aa14.9□□□□□ -0.02
VARS2-210ENST00000490699 NRKQ7Z2Y5 1582 aa14.9□□□□□ -0.02
VARS2-210ENST00000490699 SBNO1A3KN83 1393 aa14.89□□□□□ -0.03
VARS2-210ENST00000490699 ARHGEF10O15013 1369 aa14.89□□□□□ -0.03
VARS2-210ENST00000490699 AHDC1Q5TGY3 1603 aaPredicted RBP14.89□□□□□ -0.03
VARS2-210ENST00000490699 XPCQ01831 940 aaPredicted RBP14.89□□□□□ -0.03
VARS2-210ENST00000490699 ABTB2Q8N961 1025 aa14.89□□□□□ -0.03
VARS2-210ENST00000490699 COG3Q96JB2 828 aa14.89□□□□□ -0.03
VARS2-210ENST00000490699 PHLPP1O60346 1717 aa14.89□□□□□ -0.03
VARS2-210ENST00000490699 CARD14Q9BXL6 1004 aa14.88□□□□□ -0.03
VARS2-210ENST00000490699 NPC1L1Q9UHC9 1359 aa14.87□□□□□ -0.03
VARS2-210ENST00000490699 TNS3Q68CZ2 1445 aa14.87□□□□□ -0.03
VARS2-210ENST00000490699 CNGB1Q14028 1251 aaPredicted RBP14.87□□□□□ -0.03
VARS2-210ENST00000490699 NLRP13Q86W25 1043 aa14.87□□□□□ -0.03
VARS2-210ENST00000490699 LRRC59Q96AG4 307 aaKnown RBP14.87□□□□□ -0.03
VARS2-210ENST00000490699 PXDNQ92626 1479 aa14.87□□□□□ -0.03
VARS2-210ENST00000490699 SOS2Q07890 1332 aaPredicted RBP14.87□□□□□ -0.03
VARS2-210ENST00000490699 PER1O15534 1290 aaPredicted RBP14.86□□□□□ -0.03
VARS2-210ENST00000490699 CC2D1BQ5T0F9 858 aaKnown RBP14.86□□□□□ -0.03
VARS2-210ENST00000490699 MORC1Q86VD1 984 aa14.86□□□□□ -0.03
VARS2-210ENST00000490699 TRPM3Q9HCF6 1732 aaPredicted RBP14.86□□□□□ -0.03
VARS2-210ENST00000490699 ANKRD26Q9UPS8 1709 aa14.86□□□□□ -0.03
VARS2-210ENST00000490699 HAP1P54257 671 aaPredicted RBP14.85□□□□□ -0.03
VARS2-210ENST00000490699 NLRP6P59044 892 aa14.85□□□□□ -0.03
VARS2-210ENST00000490699 RALBP1Q15311 655 aa14.85□□□□□ -0.03
VARS2-210ENST00000490699 DDX17Q92841 729 aaKnown RBP14.85□□□□□ -0.03
VARS2-210ENST00000490699 SSH2Q76I76 1423 aa14.84□□□□□ -0.03
VARS2-210ENST00000490699 AMER1Q5JTC6 1135 aaPredicted RBP14.84□□□□□ -0.03
VARS2-210ENST00000490699 NME9Q86XW9 330 aa14.84□□□□□ -0.03
VARS2-210ENST00000490699 GGNBP2Q9H3C7 697 aa14.84□□□□□ -0.03
VARS2-210ENST00000490699 SPATA31A3Q5VYP0 1347 aa14.84□□□□□ -0.03
VARS2-210ENST00000490699 FYB1O15117 783 aa14.83□□□□□ -0.04
VARS2-210ENST00000490699 PIK3C2AO00443 1686 aa14.83□□□□□ -0.04
VARS2-210ENST00000490699 ALS2Q96Q42 1657 aa14.82□□□□□ -0.04
VARS2-210ENST00000490699 KCNH5Q8NCM2 988 aa14.82□□□□□ -0.04
VARS2-210ENST00000490699 USP31Q70CQ4 1352 aa14.82□□□□□ -0.04
VARS2-210ENST00000490699 NUTM2GQ5VZR2 741 aa14.8□□□□□ -0.04
VARS2-210ENST00000490699 OVOS2A0A0J9YW53 1432 aa14.8□□□□□ -0.04
VARS2-210ENST00000490699 OVOS2Q6IE36 1432 aa14.8□□□□□ -0.04
VARS2-210ENST00000490699 COL16A1Q07092 1604 aaPredicted RBP14.8□□□□□ -0.04
VARS2-210ENST00000490699 USP54Q70EL1 1684 aa14.8□□□□□ -0.04
VARS2-210ENST00000490699 MED1Q15648 1581 aaPredicted RBP14.78□□□□□ -0.04
VARS2-210ENST00000490699 PARD3Q8TEW0 1356 aa14.78□□□□□ -0.04
VARS2-210ENST00000490699 PLEKHG5O94827 1062 aa14.78□□□□□ -0.04
VARS2-210ENST00000490699 TNNT2P45379 298 aaPredicted RBP14.78□□□□□ -0.04
VARS2-210ENST00000490699 FBXO41Q8TF61 875 aa14.78□□□□□ -0.04
VARS2-210ENST00000490699 PRKRIP1Q9H875 184 aaPredicted RBP14.78□□□□□ -0.04
VARS2-210ENST00000490699 JCADQ9P266 1359 aa14.77□□□□□ -0.04
VARS2-210ENST00000490699 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.04
VARS2-210ENST00000490699 SOX12O15370 315 aa14.77□□□□□ -0.05
VARS2-210ENST00000490699 CFAP53Q96M91 514 aa14.76□□□□□ -0.05
VARS2-210ENST00000490699 PNPLA6Q8IY17 1366 aa14.75□□□□□ -0.05
VARS2-210ENST00000490699 SHPRHQ149N8 1683 aa14.75□□□□□ -0.05
VARS2-210ENST00000490699 USP19O94966 1318 aa14.75□□□□□ -0.05
VARS2-210ENST00000490699 COL22A1Q8NFW1 1626 aaPredicted RBP14.75□□□□□ -0.05
VARS2-210ENST00000490699 PHRF1Q9P1Y6 1649 aaKnown RBP14.75□□□□□ -0.05
VARS2-210ENST00000490699 ZRANB1Q9UGI0 708 aa14.75□□□□□ -0.05
VARS2-210ENST00000490699 SLIT3O75094 1523 aa14.75□□□□□ -0.05
VARS2-210ENST00000490699 AATKQ6ZMQ8 1374 aa14.74□□□□□ -0.05
VARS2-210ENST00000490699 ZBTB7CA1YPR0 619 aa14.74□□□□□ -0.05
VARS2-210ENST00000490699 ABCB7O75027 752 aa14.74□□□□□ -0.05
VARS2-210ENST00000490699 HSPA1LP34931 641 aa14.74□□□□□ -0.05
VARS2-210ENST00000490699 PPM1GO15355 546 aaPredicted RBP14.73□□□□□ -0.05
VARS2-210ENST00000490699 GCP02774 474 aa14.73□□□□□ -0.05
VARS2-210ENST00000490699 AMPHP49418 695 aa14.73□□□□□ -0.05
VARS2-210ENST00000490699 SPATA31A6Q5VVP1 1343 aa14.72□□□□□ -0.05
VARS2-210ENST00000490699 PPP2R1AP30153 589 aa14.72□□□□□ -0.05
VARS2-210ENST00000490699 MARF1Q9Y4F3 1742 aaKnown RBP14.72□□□□□ -0.05
VARS2-210ENST00000490699 KIF24Q5T7B8 1368 aa14.72□□□□□ -0.05
VARS2-210ENST00000490699 ABCA3Q99758 1704 aa14.71□□□□□ -0.05
VARS2-210ENST00000490699 RTL1A6NKG5 1358 aa14.71□□□□□ -0.06
VARS2-210ENST00000490699 CABLES1Q8TDN4 633 aa14.7□□□□□ -0.06
VARS2-210ENST00000490699 PRDM11Q9NQV5 511 aa14.7□□□□□ -0.06
VARS2-210ENST00000490699 MAP2P11137 1827 aaKnown RBP14.7□□□□□ -0.06
VARS2-210ENST00000490699 LTN1O94822 1766 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms